| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is rcp1 [H]
Identifier: 146302568
GI number: 146302568
Start: 5858384
End: 5858833
Strand: Direct
Name: rcp1 [H]
Synonym: Fjoh_4841
Alternate gene names: 146302568
Gene position: 5858384-5858833 (Clockwise)
Preceding gene: 146302566
Following gene: 146302569
Centisome position: 96.09
GC content: 33.56
Gene sequence:
>450_bases ATGAACAAACAGATTTACAACATTTTACTAGCTGATGACGACGAGGACGACTGCTCTTTTTTTGAAGAAGCTTTAGATGA ATTATCGCTTGCCACAACTCTTGTAACTGTAAATGACGGAGTTCAATTAATGGACTTTCTGGCAGATAAATCTGGAAATG ATTTACCTGATATTCTTTTTTTAGATTTGAATATGCCTAGAAAAAACGGTTCAGAATGTCTTACAGAAATTAGACAGATT GAAAAACTAAAAGATTTTCCGATAGTAATTTTTTCGACTTCTCTCGACAGCGAAATCGTAGACGTTATGTACGATAAAGA TGCTACATATTATATTCGCAAACCCGGCGATTTTTCAAAATTAAAATCGGTTATAGAAAATGCCCTTATTACTGCCTCCG AAAATAATTTCAAAAAACCTGCACGAGCACATTTTATAATTCAACCCTAA
Upstream 100 bases:
>100_bases TAATTATACTGCGAAAATTAATTTTATCTTAGCAAGAAAACATTCATTTTCGCTTTTACTTTTTAAACCTAAGCAGAATA CCCAAAATATTTTATACTGA
Downstream 100 bases:
>100_bases ATCCTTTTGTAATGAGCCACGCCAATAAGGAACATTATTTTTTAGCCGATGGCGGAGAAATGGGCGAATTAATACGCTCC AAAGACTGGAGCAAAACTCC
Product: response regulator receiver protein
Products: NADP; 2 glutathione [C]
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MNKQIYNILLADDDEDDCSFFEEALDELSLATTLVTVNDGVQLMDFLADKSGNDLPDILFLDLNMPRKNGSECLTEIRQI EKLKDFPIVIFSTSLDSEIVDVMYDKDATYYIRKPGDFSKLKSVIENALITASENNFKKPARAHFIIQP
Sequences:
>Translated_149_residues MNKQIYNILLADDDEDDCSFFEEALDELSLATTLVTVNDGVQLMDFLADKSGNDLPDILFLDLNMPRKNGSECLTEIRQI EKLKDFPIVIFSTSLDSEIVDVMYDKDATYYIRKPGDFSKLKSVIENALITASENNFKKPARAHFIIQP >Mature_149_residues MNKQIYNILLADDDEDDCSFFEEALDELSLATTLVTVNDGVQLMDFLADKSGNDLPDILFLDLNMPRKNGSECLTEIRQI EKLKDFPIVIFSTSLDSEIVDVMYDKDATYYIRKPGDFSKLKSVIENALITASENNFKKPARAHFIIQP
Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 16918; Mature: 16918
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKQIYNILLADDDEDDCSFFEEALDELSLATTLVTVNDGVQLMDFLADKSGNDLPDILF CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHCCCCCCCCCEEE LDLNMPRKNGSECLTEIRQIEKLKDFPIVIFSTSLDSEIVDVMYDKDATYYIRKPGDFSK EECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHEECCCCEEEEECCCCHHH LKSVIENALITASENNFKKPARAHFIIQP HHHHHHHHEEECCCCCCCCCCCEEEEECC >Mature Secondary Structure MNKQIYNILLADDDEDDCSFFEEALDELSLATTLVTVNDGVQLMDFLADKSGNDLPDILF CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHCCCCCCCCCEEE LDLNMPRKNGSECLTEIRQIEKLKDFPIVIFSTSLDSEIVDVMYDKDATYYIRKPGDFSK EECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHEECCCCEEEEECCCCHHH LKSVIENALITASENNFKKPARAHFIIQP HHHHHHHHEEECCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH2; oxidized glutathione [C]
Specific reaction: NADPH2 + oxidized glutathione = NADP + 2 glutathione [C]
General reaction: Oxidoreductases; Acting on NADH or NADPH; With a disulfide as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231; 9278513 [H]