| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yesF [H]
Identifier: 146302551
GI number: 146302551
Start: 5841678
End: 5842508
Strand: Direct
Name: yesF [H]
Synonym: Fjoh_4824
Alternate gene names: 146302551
Gene position: 5841678-5842508 (Clockwise)
Preceding gene: 146302550
Following gene: 146302552
Centisome position: 95.81
GC content: 37.55
Gene sequence:
>831_bases ATGAAAAAGAAAATTTTAGTTCTGGGTTCTAATGGAAAAACAGGACGCAGAGTTGTAACCAGATTAGAAAATAATCCAGA TTTTGAAATTCGTTTAGGTTCACGAAACGAAAAAATTCCGTTTGACTGGGAAAATCCTGAAACCTGGGAAAATATTGTAA AAGATATTGATACGGTTTATATAACTTTTCAGCCGGATCTTGCCGTTCCTTTTGCTGCAGAAGCTATAGAAAATTTCACA AAACTTGCAGTAAAATCGGGAGTAGAAAAAATCGTTTTACTTTCGGGCAGAGGCGAAAAAGAAGCTCAGGTTTGCGAGGA AATCGTAAAGAAAAATGCCAAAAACTGGACGATTGTCCGTGCGAGCTGGTTTAATCAGAATTTCAGCGAAAGCTTTTTCT TAGATCCAATTCTTTACGGAATCGTTGCTTTGCCAAGAGCCGAAGCACTTGAACCTTTTACAGATGCGGATGATATTGCC GATGTTGTTACAAAAGCTCTTTTAGACGAAAATCATAACGGAAAAACCTATGAATTGACTGGGCCAAGATTATTAACTTT TAAAGAAGCGGTAAATGAAATTGCCAACGCCAGCGGCAGAAATATTAGTTTTCAGGGTTTAAGTTTAGAAGAATACACGC AGATGCTGAAAGAATATCAGATTCCTGACGATCATATCTGGCTGGTAAATTATCTTTTTGAACAGGTTTTGGACGGAAGA AATTCGAGCGTTACTTCAGACATTGAAAAAGTTTTGGGAAGAAAGGCGAAAGATTTTAGCGCTTACGCGAAAGAAACAGC CAAAACCGGAATCTGGAATCCTGAAAATTAA
Upstream 100 bases:
>100_bases AGCAGTTCTTTTCAAACAAATCATAATTCCTTTGCGACAAATGATTGTGTTTTAATCTCAACAACTTTGTATCAGTAATC ATCATTAAAAAACTACTGAT
Downstream 100 bases:
>100_bases AAAAGATGAAATACATCAGAGCCATTTTTTCGGGTATTTTGGTTTGGATTGCAGTTAGTTTGTCTTTTTATATTCTAGAA CAAATTCTATTTGTAAAAGA
Product: NmrA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MKKKILVLGSNGKTGRRVVTRLENNPDFEIRLGSRNEKIPFDWENPETWENIVKDIDTVYITFQPDLAVPFAAEAIENFT KLAVKSGVEKIVLLSGRGEKEAQVCEEIVKKNAKNWTIVRASWFNQNFSESFFLDPILYGIVALPRAEALEPFTDADDIA DVVTKALLDENHNGKTYELTGPRLLTFKEAVNEIANASGRNISFQGLSLEEYTQMLKEYQIPDDHIWLVNYLFEQVLDGR NSSVTSDIEKVLGRKAKDFSAYAKETAKTGIWNPEN
Sequences:
>Translated_276_residues MKKKILVLGSNGKTGRRVVTRLENNPDFEIRLGSRNEKIPFDWENPETWENIVKDIDTVYITFQPDLAVPFAAEAIENFT KLAVKSGVEKIVLLSGRGEKEAQVCEEIVKKNAKNWTIVRASWFNQNFSESFFLDPILYGIVALPRAEALEPFTDADDIA DVVTKALLDENHNGKTYELTGPRLLTFKEAVNEIANASGRNISFQGLSLEEYTQMLKEYQIPDDHIWLVNYLFEQVLDGR NSSVTSDIEKVLGRKAKDFSAYAKETAKTGIWNPEN >Mature_276_residues MKKKILVLGSNGKTGRRVVTRLENNPDFEIRLGSRNEKIPFDWENPETWENIVKDIDTVYITFQPDLAVPFAAEAIENFT KLAVKSGVEKIVLLSGRGEKEAQVCEEIVKKNAKNWTIVRASWFNQNFSESFFLDPILYGIVALPRAEALEPFTDADDIA DVVTKALLDENHNGKTYELTGPRLLTFKEAVNEIANASGRNISFQGLSLEEYTQMLKEYQIPDDHIWLVNYLFEQVLDGR NSSVTSDIEKVLGRKAKDFSAYAKETAKTGIWNPEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NmrA-type oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR008030 [H]
Pfam domain/function: PF05368 NmrA [H]
EC number: NA
Molecular weight: Translated: 31281; Mature: 31281
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKILVLGSNGKTGRRVVTRLENNPDFEIRLGSRNEKIPFDWENPETWENIVKDIDTVY CCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHEEE ITFQPDLAVPFAAEAIENFTKLAVKSGVEKIVLLSGRGEKEAQVCEEIVKKNAKNWTIVR EEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEE ASWFNQNFSESFFLDPILYGIVALPRAEALEPFTDADDIADVVTKALLDENHNGKTYELT EECCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEC GPRLLTFKEAVNEIANASGRNISFQGLSLEEYTQMLKEYQIPDDHIWLVNYLFEQVLDGR CCEEEHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC NSSVTSDIEKVLGRKAKDFSAYAKETAKTGIWNPEN CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKKKILVLGSNGKTGRRVVTRLENNPDFEIRLGSRNEKIPFDWENPETWENIVKDIDTVY CCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHEEE ITFQPDLAVPFAAEAIENFTKLAVKSGVEKIVLLSGRGEKEAQVCEEIVKKNAKNWTIVR EEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEE ASWFNQNFSESFFLDPILYGIVALPRAEALEPFTDADDIADVVTKALLDENHNGKTYELT EECCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEC GPRLLTFKEAVNEIANASGRNISFQGLSLEEYTQMLKEYQIPDDHIWLVNYLFEQVLDGR CCEEEHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC NSSVTSDIEKVLGRKAKDFSAYAKETAKTGIWNPEN CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]