| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yieL [C]
Identifier: 146302537
GI number: 146302537
Start: 5816251
End: 5817072
Strand: Reverse
Name: yieL [C]
Synonym: Fjoh_4810
Alternate gene names: 146302537
Gene position: 5817072-5816251 (Counterclockwise)
Preceding gene: 146302538
Following gene: 146302536
Centisome position: 95.41
GC content: 33.94
Gene sequence:
>822_bases ATGAAAAAAGCAATCTGCACTTTACTTCTGGCATTCGTATTTTTTTCTGCAAAAGCAGCAAAAATTGACACAATTCAGGT TTTTAGTCCTTCAATGAATAAGAACATAAAAACCTCAGTAATAGTTCCCGATAATTATAAAAAAAGCAAAGATAGATTTC CGGTAGTGTATCTTCTTCATGGTTACAGCGGCAATTACGGAAGCTGGGCAAAAGATTTTAAAGATCTGGCAAAACAAGTT GATCAATACGGTTTTATAGCAATTGGCGTTGACGGAAATTATTCAAGCTGGTATTTTGACAGCCCGATAGATCCAAGTTT TAAATATGAAACTTATGTAATAAATGAATTAGTTCCTTTTATAGATAAAAATTACAAAACTATTTCCAACCGCGATGGCA GAGCCATAACAGGTTTAAGCATGGGCGGACACGGAGCATTGTATTTATCATTTAAACATCAGGATGTATTTGGTGCGGCA GGAAGTATGAGCGGAGGAGTCGATTTTCGTCCGTTTCCAAACAATTGGGATATTAAAAAACGTTTGGGTTCTATAACAGA ATTTCCTGAAAACTGGGATAAAAATACCGTTACCAATCTGCTTGATCTGGTAAAAGACAACAAGTTAAAAATGATTATAG ACTGCGGTGTTGGTGATTTTTTTATGGAAGTAAACAGACAGCTTCATCAAAAAATGCTGACATTAAAAATAAACCATGAT TATATCGAACGTCCGGGAGAACATAATCTGGCTTATTGGGAAAATTCATTAAAGTTTCAATTACTGTTCTTTGATAATTT TTTCAAAGAGAAAAAGAAATAA
Upstream 100 bases:
>100_bases CATTAAGAGATTAAGAAATTTAAGCTAAGCTTTATGAACTTAATTTCTTAATGGTAAAAGCAAGGAATTTATTTTGACAT AATCACTAAAACAAGATTTT
Downstream 100 bases:
>100_bases AAGTTATGTGCTGCGATACGATTAAGCAGCATATAAAATTAGGTTGGTTACCTATCCTAACAGGTTTTTAAAACCTGTTA GGAACTTTTTAACCGCCTCA
Product: putative esterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MKKAICTLLLAFVFFSAKAAKIDTIQVFSPSMNKNIKTSVIVPDNYKKSKDRFPVVYLLHGYSGNYGSWAKDFKDLAKQV DQYGFIAIGVDGNYSSWYFDSPIDPSFKYETYVINELVPFIDKNYKTISNRDGRAITGLSMGGHGALYLSFKHQDVFGAA GSMSGGVDFRPFPNNWDIKKRLGSITEFPENWDKNTVTNLLDLVKDNKLKMIIDCGVGDFFMEVNRQLHQKMLTLKINHD YIERPGEHNLAYWENSLKFQLLFFDNFFKEKKK
Sequences:
>Translated_273_residues MKKAICTLLLAFVFFSAKAAKIDTIQVFSPSMNKNIKTSVIVPDNYKKSKDRFPVVYLLHGYSGNYGSWAKDFKDLAKQV DQYGFIAIGVDGNYSSWYFDSPIDPSFKYETYVINELVPFIDKNYKTISNRDGRAITGLSMGGHGALYLSFKHQDVFGAA GSMSGGVDFRPFPNNWDIKKRLGSITEFPENWDKNTVTNLLDLVKDNKLKMIIDCGVGDFFMEVNRQLHQKMLTLKINHD YIERPGEHNLAYWENSLKFQLLFFDNFFKEKKK >Mature_273_residues MKKAICTLLLAFVFFSAKAAKIDTIQVFSPSMNKNIKTSVIVPDNYKKSKDRFPVVYLLHGYSGNYGSWAKDFKDLAKQV DQYGFIAIGVDGNYSSWYFDSPIDPSFKYETYVINELVPFIDKNYKTISNRDGRAITGLSMGGHGALYLSFKHQDVFGAA GSMSGGVDFRPFPNNWDIKKRLGSITEFPENWDKNTVTNLLDLVKDNKLKMIIDCGVGDFFMEVNRQLHQKMLTLKINHD YIERPGEHNLAYWENSLKFQLLFFDNFFKEKKK
Specific function: Unknown
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 3 LysM repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR018392 - InterPro: IPR002482 - InterPro: IPR008861 [H]
Pfam domain/function: PF00756 Esterase; PF01476 LysM; PF05489 Phage_tail_X [H]
EC number: NA
Molecular weight: Translated: 31380; Mature: 31380
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAICTLLLAFVFFSAKAAKIDTIQVFSPSMNKNIKTSVIVPDNYKKSKDRFPVVYLLH CCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEE GYSGNYGSWAKDFKDLAKQVDQYGFIAIGVDGNYSSWYFDSPIDPSFKYETYVINELVPF CCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEECCCCCCCCCCCEEEHHHHHHH IDKNYKTISNRDGRAITGLSMGGHGALYLSFKHQDVFGAAGSMSGGVDFRPFPNNWDIKK HCCCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCHHH RLGSITEFPENWDKNTVTNLLDLVKDNKLKMIIDCGVGDFFMEVNRQLHQKMLTLKINHD HHCCHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHEEEEEEECCH YIERPGEHNLAYWENSLKFQLLFFDNFFKEKKK HHCCCCCCCEEEECCCEEEEEEEEHHHHHHHCC >Mature Secondary Structure MKKAICTLLLAFVFFSAKAAKIDTIQVFSPSMNKNIKTSVIVPDNYKKSKDRFPVVYLLH CCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEE GYSGNYGSWAKDFKDLAKQVDQYGFIAIGVDGNYSSWYFDSPIDPSFKYETYVINELVPF CCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEECCCCCCCCCCCEEEHHHHHHH IDKNYKTISNRDGRAITGLSMGGHGALYLSFKHQDVFGAAGSMSGGVDFRPFPNNWDIKK HCCCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCHHH RLGSITEFPENWDKNTVTNLLDLVKDNKLKMIIDCGVGDFFMEVNRQLHQKMLTLKINHD HHCCHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHEEEEEEECCH YIERPGEHNLAYWENSLKFQLLFFDNFFKEKKK HHCCCCCCCEEEECCCEEEEEEEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]