| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302531
Identifier: 146302531
GI number: 146302531
Start: 5805762
End: 5806874
Strand: Reverse
Name: 146302531
Synonym: Fjoh_4804
Alternate gene names: NA
Gene position: 5806874-5805762 (Counterclockwise)
Preceding gene: 146302532
Following gene: 146302524
Centisome position: 95.24
GC content: 35.58
Gene sequence:
>1113_bases ATGACTACAAACAATTCTTCAATTCCTATTTTACAAACCAAACAACATTTTGAAATTCTAGACGGACTGCGAGGCGTAGC AGCACTTGCAGTTGTTATTTTCCATTTTATGGAATGGATTTTTACAGACCCAAGCAAGAATTTTATCGGACATGGCTTTT TGGCTGTCGATTTCTTTTTCTGTCTTTCCGGATTTGTAATTGGTTATGCTTATGACGATCGTATTGCAAAAATGGGATTG CGTAATTTTTTTATATCCCGAATTATAAGACTTCATCCGCTTGTTGCGGCAGGATCTGTATTAGGTTTACTGGCTTTTTT ATTTGACCCATTTGGCGGTAATCTTGAATTGTACAGCACAGGTAAAATTATTTTAACTTTTATCTGTTCCTTATTTATGA TTCCTTTGCCTGTAATTGCAGATCGCGGTTTTAATTTGTTCAGTTTCAATGCGCCGGCCTGGTCGTTATTTTGGGAATAT ATTGCAAATATTGTCTACGCTTTTGTACTTTACAGAATAGCGCGCAGTTATCTTTTAATCTTGACTATAATTGCTGCAGC AGCGATTTGTTATGTGGGTTATAATTCGGGGAATTTATTAGGAGGCTGGAGCGGGCCTACTTTTTGGGATGGATTCGCCA GAATATCGTATTCATTTTTAGCCGGATTGCTTATTTACCGTTCAAACTGGATTATTAAAAACAAACTTGGATTTGCGGGT TTATCTGTATTGTTGTTATTGGCTTTTATAATGCCTTCTTCGGCAATGAATTGGATAACTGAACCTTTAATTGTATTGTT TTATTTTCCTCTGCTGGTATCTTTAGGAGCCGGATCGGTTTTAAATCAGGGACTGAAAAAGGTTTGTGTTTTCTCTGGCA ATATATCTTATCCGTTATACATGACACATTATGCTGCTTTATGGATGTTTGGAAATTATTACACGAATTATAAACCAGAT ACGACACAATTGACATTTGTTGTTATATCTGGAGTGATTCTGCTTGTTGGATTTGCTTATTTGGTAATGGTGGTTTATGA TATTCCGCTGAGAAAATATTTAACTGATAAACGAAAAGAAAAACTGGCAAAGCTTAAGACCGAAAACATATAA
Upstream 100 bases:
>100_bases TTTTAGAAGATTGCATTTTAAAGACGGAGACAATTTAAAACCAGCGAATTAATTAAACCAAATCATAAATTAACTTAACC ATTTCGCATAAACCTTAATA
Downstream 100 bases:
>100_bases AAACTATTTTCAGAATGCTGTAAATAAAGAAAGGGAAGATTTTTATGTCTTCCCTTTTGTTTTTTATAAATCCAGAATTT CTAAAATTGATTAGTTTTTC
Product: acyltransferase 3
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MTTNNSSIPILQTKQHFEILDGLRGVAALAVVIFHFMEWIFTDPSKNFIGHGFLAVDFFFCLSGFVIGYAYDDRIAKMGL RNFFISRIIRLHPLVAAGSVLGLLAFLFDPFGGNLELYSTGKIILTFICSLFMIPLPVIADRGFNLFSFNAPAWSLFWEY IANIVYAFVLYRIARSYLLILTIIAAAAICYVGYNSGNLLGGWSGPTFWDGFARISYSFLAGLLIYRSNWIIKNKLGFAG LSVLLLLAFIMPSSAMNWITEPLIVLFYFPLLVSLGAGSVLNQGLKKVCVFSGNISYPLYMTHYAALWMFGNYYTNYKPD TTQLTFVVISGVILLVGFAYLVMVVYDIPLRKYLTDKRKEKLAKLKTENI
Sequences:
>Translated_370_residues MTTNNSSIPILQTKQHFEILDGLRGVAALAVVIFHFMEWIFTDPSKNFIGHGFLAVDFFFCLSGFVIGYAYDDRIAKMGL RNFFISRIIRLHPLVAAGSVLGLLAFLFDPFGGNLELYSTGKIILTFICSLFMIPLPVIADRGFNLFSFNAPAWSLFWEY IANIVYAFVLYRIARSYLLILTIIAAAAICYVGYNSGNLLGGWSGPTFWDGFARISYSFLAGLLIYRSNWIIKNKLGFAG LSVLLLLAFIMPSSAMNWITEPLIVLFYFPLLVSLGAGSVLNQGLKKVCVFSGNISYPLYMTHYAALWMFGNYYTNYKPD TTQLTFVVISGVILLVGFAYLVMVVYDIPLRKYLTDKRKEKLAKLKTENI >Mature_369_residues TTNNSSIPILQTKQHFEILDGLRGVAALAVVIFHFMEWIFTDPSKNFIGHGFLAVDFFFCLSGFVIGYAYDDRIAKMGLR NFFISRIIRLHPLVAAGSVLGLLAFLFDPFGGNLELYSTGKIILTFICSLFMIPLPVIADRGFNLFSFNAPAWSLFWEYI ANIVYAFVLYRIARSYLLILTIIAAAAICYVGYNSGNLLGGWSGPTFWDGFARISYSFLAGLLIYRSNWIIKNKLGFAGL SVLLLLAFIMPSSAMNWITEPLIVLFYFPLLVSLGAGSVLNQGLKKVCVFSGNISYPLYMTHYAALWMFGNYYTNYKPDT TQLTFVVISGVILLVGFAYLVMVVYDIPLRKYLTDKRKEKLAKLKTENI
Specific function: Seems to regulate the surface properties of the bacterium in the presence of plant cells or plant cell extracts [H]
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cell membrane (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41611; Mature: 41480
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNNSSIPILQTKQHFEILDGLRGVAALAVVIFHFMEWIFTDPSKNFIGHGFLAVDFFF CCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHH CLSGFVIGYAYDDRIAKMGLRNFFISRIIRLHPLVAAGSVLGLLAFLFDPFGGNLELYST HHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC GKIILTFICSLFMIPLPVIADRGFNLFSFNAPAWSLFWEYIANIVYAFVLYRIARSYLLI CHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTIIAAAAICYVGYNSGNLLGGWSGPTFWDGFARISYSFLAGLLIYRSNWIIKNKLGFAG HHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHH LSVLLLLAFIMPSSAMNWITEPLIVLFYFPLLVSLGAGSVLNQGLKKVCVFSGNISYPLY HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHH MTHYAALWMFGNYYTNYKPDTTQLTFVVISGVILLVGFAYLVMVVYDIPLRKYLTDKRKE HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH KLAKLKTENI HHHHHHCCCC >Mature Secondary Structure TTNNSSIPILQTKQHFEILDGLRGVAALAVVIFHFMEWIFTDPSKNFIGHGFLAVDFFF CCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHH CLSGFVIGYAYDDRIAKMGLRNFFISRIIRLHPLVAAGSVLGLLAFLFDPFGGNLELYST HHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC GKIILTFICSLFMIPLPVIADRGFNLFSFNAPAWSLFWEYIANIVYAFVLYRIARSYLLI CHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTIIAAAAICYVGYNSGNLLGGWSGPTFWDGFARISYSFLAGLLIYRSNWIIKNKLGFAG HHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHH LSVLLLLAFIMPSSAMNWITEPLIVLFYFPLLVSLGAGSVLNQGLKKVCVFSGNISYPLY HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHH MTHYAALWMFGNYYTNYKPDTTQLTFVVISGVILLVGFAYLVMVVYDIPLRKYLTDKRKE HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH KLAKLKTENI HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1860822 [H]