Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302506

Identifier: 146302506

GI number: 146302506

Start: 5772488

End: 5773765

Strand: Direct

Name: 146302506

Synonym: Fjoh_4779

Alternate gene names: NA

Gene position: 5772488-5773765 (Clockwise)

Preceding gene: 146302504

Following gene: 146302507

Centisome position: 94.68

GC content: 36.31

Gene sequence:

>1278_bases
ATGAAAACGAAATTACTTTTAATAGCCTTTACAGCATTAGTTTTTGGTTCTTGTGCCGCACAAAATCAAACTACGGTGTA
TGCAAAAAATTCAGATATAAGCGATAATTTAGATTTAAGAGCCGTTGCTTCTATGTTTGGTGAATCTGCAAATCTTCAGG
ATTTTGAAAGAAGATTAAACGATCCTAAATATCAAATTTCTAACCTTGACTTAAACGGTGATGACCAGGTAGATTATTTA
CGTGTAATCGAATCTGTAGAAGACAGAACTCACGTTGTAATTATACAAGCGGTTTTAGATCGTGATGTGTATCAGGACGT
AGCTACAATTGATGTAGAAAGAGACAACTACAACAAAGTAAGTGTTCAGGTTGTAGGTAATACCTATTTATATGGTGATA
ATTACATCTACGAACCTGTTTACAGTGTTGCTCCGGTAATTTATACTTCATTTTGGGTTACAAATTACAGACCTTATTAT
TCTACATGGTATTGGGGATATTACCCAACTTATTACACAGCGTGGAGACCTTATCCTGTTTACAGATACAGAAATAACAT
AAATGTGTGTATTAATGTTCATAACAGCTATAACTATGTAAATACAAGAAGAAGCTACAGAGCTCCTGTTATTTATGAAA
CAAGACGTACATATGGTTACGAAAGAATGAGACCAAACTACAGCTTTGCTGACAGACACTCAAATGTAAGCAACAGATAT
GACTTAGATCAAAGAAGAGTTGCCAGCAGAGACCTAAACAGAACTCAAAATACGTACAACTATAACAGATCTAACTCAGG
AAGAGTTTCTGCAGAAAACAGAAATTATACTGATAACAGATCAACAAGTAACAGAAGTTATAATAATACAAATCGTGTAA
CCAGCAGAGAAAATTCTGCGGCTGTAAACACACCAAGAACTGATAATACTCCAAGAGCAGATTACGGAAGAAATAATTCT
AATGCAACTGCGCCAAGAGGAAATTCAGAAAACAGAAATTACACTAACAGAACATCTTCATCAGCAAGTGAATCGCCAAG
AAGTTATTCTGAAAACAGAAACACTAACAGATCTTCATCTGCTGCACCAGTTCAAAGATCAGAATCTCCAAGAAGCTATT
CTGAAAGCAGAGGAAATTCTGAAAACAGATCAAATGCATCAAGATCTCAAAATATGCAGCGTTCTGAATCTCCTCGTGCA
AGCCAGGAGTCAAGAGGAAACAGCCAGCCGCAAAGAGAAAGCGGTTCTAGTTCTAGAGGAGGCGGGAGAAGAGGATAA

Upstream 100 bases:

>100_bases
TATTAAAAACATGATAGTTAACACCACAAAAGTCTATAGATAAAATTGTGGCACAGTAATTGGATATCTCCTAATACAAA
TAATTTAATATGATTTTATC

Downstream 100 bases:

>100_bases
TAAATATATTTCAATTTTTACTTAAAATTAAAAGCACAATTTGGGGATTGTGCTTTTTTTTATCTTTTTAATTATTATTG
TCGCTAATTTGTTTTAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MKTKLLLIAFTALVFGSCAAQNQTTVYAKNSDISDNLDLRAVASMFGESANLQDFERRLNDPKYQISNLDLNGDDQVDYL
RVIESVEDRTHVVIIQAVLDRDVYQDVATIDVERDNYNKVSVQVVGNTYLYGDNYIYEPVYSVAPVIYTSFWVTNYRPYY
STWYWGYYPTYYTAWRPYPVYRYRNNINVCINVHNSYNYVNTRRSYRAPVIYETRRTYGYERMRPNYSFADRHSNVSNRY
DLDQRRVASRDLNRTQNTYNYNRSNSGRVSAENRNYTDNRSTSNRSYNNTNRVTSRENSAAVNTPRTDNTPRADYGRNNS
NATAPRGNSENRNYTNRTSSSASESPRSYSENRNTNRSSSAAPVQRSESPRSYSESRGNSENRSNASRSQNMQRSESPRA
SQESRGNSQPQRESGSSSRGGGRRG

Sequences:

>Translated_425_residues
MKTKLLLIAFTALVFGSCAAQNQTTVYAKNSDISDNLDLRAVASMFGESANLQDFERRLNDPKYQISNLDLNGDDQVDYL
RVIESVEDRTHVVIIQAVLDRDVYQDVATIDVERDNYNKVSVQVVGNTYLYGDNYIYEPVYSVAPVIYTSFWVTNYRPYY
STWYWGYYPTYYTAWRPYPVYRYRNNINVCINVHNSYNYVNTRRSYRAPVIYETRRTYGYERMRPNYSFADRHSNVSNRY
DLDQRRVASRDLNRTQNTYNYNRSNSGRVSAENRNYTDNRSTSNRSYNNTNRVTSRENSAAVNTPRTDNTPRADYGRNNS
NATAPRGNSENRNYTNRTSSSASESPRSYSENRNTNRSSSAAPVQRSESPRSYSESRGNSENRSNASRSQNMQRSESPRA
SQESRGNSQPQRESGSSSRGGGRRG
>Mature_425_residues
MKTKLLLIAFTALVFGSCAAQNQTTVYAKNSDISDNLDLRAVASMFGESANLQDFERRLNDPKYQISNLDLNGDDQVDYL
RVIESVEDRTHVVIIQAVLDRDVYQDVATIDVERDNYNKVSVQVVGNTYLYGDNYIYEPVYSVAPVIYTSFWVTNYRPYY
STWYWGYYPTYYTAWRPYPVYRYRNNINVCINVHNSYNYVNTRRSYRAPVIYETRRTYGYERMRPNYSFADRHSNVSNRY
DLDQRRVASRDLNRTQNTYNYNRSNSGRVSAENRNYTDNRSTSNRSYNNTNRVTSRENSAAVNTPRTDNTPRADYGRNNS
NATAPRGNSENRNYTNRTSSSASESPRSYSENRNTNRSSSAAPVQRSESPRSYSESRGNSENRSNASRSQNMQRSESPRA
SQESRGNSQPQRESGSSSRGGGRRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49053; Mature: 49053

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKLLLIAFTALVFGSCAAQNQTTVYAKNSDISDNLDLRAVASMFGESANLQDFERRLN
CCCEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHC
DPKYQISNLDLNGDDQVDYLRVIESVEDRTHVVIIQAVLDRDVYQDVATIDVERDNYNKV
CCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHEEEEECCCCCEE
SVQVVGNTYLYGDNYIYEPVYSVAPVIYTSFWVTNYRPYYSTWYWGYYPTYYTAWRPYPV
EEEEEEEEEEECCCEEECHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCCEE
YRYRNNINVCINVHNSYNYVNTRRSYRAPVIYETRRTYGYERMRPNYSFADRHSNVSNRY
EEECCCCEEEEEECCCCCEECCCCCCCCCEEEEHHHHCCHHHCCCCCCHHHHCCCCCCCC
DLDQRRVASRDLNRTQNTYNYNRSNSGRVSAENRNYTDNRSTSNRSYNNTNRVTSRENSA
CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AVNTPRTDNTPRADYGRNNSNATAPRGNSENRNYTNRTSSSASESPRSYSENRNTNRSSS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC
AAPVQRSESPRSYSESRGNSENRSNASRSQNMQRSESPRASQESRGNSQPQRESGSSSRG
CCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCHHCCCCCCC
GGRRG
CCCCC
>Mature Secondary Structure
MKTKLLLIAFTALVFGSCAAQNQTTVYAKNSDISDNLDLRAVASMFGESANLQDFERRLN
CCCEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHC
DPKYQISNLDLNGDDQVDYLRVIESVEDRTHVVIIQAVLDRDVYQDVATIDVERDNYNKV
CCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHEEEEECCCCCEE
SVQVVGNTYLYGDNYIYEPVYSVAPVIYTSFWVTNYRPYYSTWYWGYYPTYYTAWRPYPV
EEEEEEEEEEECCCEEECHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCCEE
YRYRNNINVCINVHNSYNYVNTRRSYRAPVIYETRRTYGYERMRPNYSFADRHSNVSNRY
EEECCCCEEEEEECCCCCEECCCCCCCCCEEEEHHHHCCHHHCCCCCCHHHHCCCCCCCC
DLDQRRVASRDLNRTQNTYNYNRSNSGRVSAENRNYTDNRSTSNRSYNNTNRVTSRENSA
CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AVNTPRTDNTPRADYGRNNSNATAPRGNSENRNYTNRTSSSASESPRSYSENRNTNRSSS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC
AAPVQRSESPRSYSESRGNSENRSNASRSQNMQRSESPRASQESRGNSQPQRESGSSSRG
CCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCHHCCCCCCC
GGRRG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA