Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302453

Identifier: 146302453

GI number: 146302453

Start: 5710248

End: 5712659

Strand: Direct

Name: 146302453

Synonym: Fjoh_4726

Alternate gene names: NA

Gene position: 5710248-5712659 (Clockwise)

Preceding gene: 146302451

Following gene: 146302454

Centisome position: 93.66

GC content: 32.71

Gene sequence:

>2412_bases
ATGGAAAAATGGAAACAAAATTTAATCGCCGCAATTCTCTTATTTGCTATAAGCCAATACTCATTTAGTCAAAAAACAAA
TTCTGTTACCGGAACTATTTCAGACGGTAAAACTCCTCTTGAATTTGTCGATGTAGTTTTAAAACCTCTTACAGATACTA
CAAAAACAGCAGCGTATGCTGTTACAGATTCGTCAGGAAAATTTGTTCTTGAAAATATCAACTCAGCAGAATATATTTTA
AAATTTCGTTTAATTGGTTTCAAATCAAATAGTCAGAAAATAAAATATACAGGAACTCCTATTTCGCTTGGAAATATTGT
TTTGCAGGAAGATGCCAATCTTCTTAATACGGTAGTTGTAAATTCTCAGAAAAAGCAGATTCAAAAAACAAACGAAGGTT
TTGTTTTTAATGCCGTTTCTAATATATCACAAACCGGCGGCACTGCAATTGATATGCTCAAAAATATCCCAACTGTTGCT
GTTGATGCAGACGATGCTATTTCACTTAGAGGAAAAACACCTTTAATTTTAATTAATGGAAAAAATTCTGCTGTTACAAA
TATGAATCAGATTCCGGCAAGCAGTATCGAAAGTATCGAAATCATTACAAGTCCAACAGCAAAATATGATGCCAATGCCG
AAAGTGGAATCATCAATATTAAATTAAAGAAAAACAACTTAAACGGATTAAACGGTGCGGCTGTTCTGGGCGGCGGATTT
GGAGCAAAAGGAAGAATGAACAGCTCTGTACTTTTAAACAATAAAACCGATAAATGGAATATTGGTCTTGCGTATGATAA
TCGTTTTGCCGGAAGAACCAAGAGTATTAAAGGTGAAAGAACGAATTACTTCATTGATGATGAACATTTTATTAATCAGA
GCAGAAGTGATGAAAGAACTGAAGGTCTGCAGAATTTAAAACTGAACGTTGATTTTTCACCAAATGACAGAAATACTATT
TCTTTTGAAGCACTTGGAAACATGGAAAGTCAGGATAATGATGAAACCTTAAAAACAGATATTCTCAATAGTTCTAATCA
GTTTTACTCTAGTAATAAACGTCATTCCCTGGAATTAGAACGTTCTAAAGCTGCAGAATTTGCTTTTAATTACGATCGAA
AGTTTTCTGATGACAGAAAAAGTTTAACTGCAAGTATTACCACCTCATACAATTTCCACAGAGAAAATACCGATATCGAC
ACAGATAATTATGATAAAAATTATGCACCAATTGGCGATACTTTTTGGCAGCGAACACATAATTATGAAAAAGAAAATAT
TTCGAATGCAATTGTAAACTATGCTTTTACTATTTCAGAAAAATCTATAATTGAAACCGGATATAAAGGAACTTTTAGAC
TTTTTAATTCAGATTTTCAAAGTGCAGACCTTATAAATGGTGAGTATGTGGTAAATCCGATGGTGAGTAATATTTTTGAT
TTTAATGAGCAGATAAATGCCGTTTATGTACTTTGGAATTCGTATTCAGGTTCTAAGGAAAATCAAAAATGGAAATACAA
TTTAGGACTTCGTGCAGAAAATGTTTCTAACAATGGGGCAACACAAAACAATAGTGATCATTTTAGCAATGATTATTTAA
AAATTTTCCCTTCCGGATCTGTACAATTGAATTTAAAATCTGATGAATTTTTAAAATTTGGTTACAGTAAACGTATTAAT
CGTCCGGATTTAGATGATTTAAATCCTTTTATTGATATTACAGACGCTTTGAATCCGCATGGAGGAAATCCATATTTAAA
GCCTGAAATTATATATATTGTAGAATTAAGCTACAATAAAGACTGGGACAAATATTCTCTTTCCGGAAATGCTTTTTACA
GAAATGCCAATAATACGATTAGACAATACGGTGTTCTTCAAGATAACGGAGTGATTTTATTGCAGCCACAAAACATTGGA
AATACAGTTACGTACGGACTTGAAACTATTTTCAGCTTTAAGCCAATTTCTTTCTACGATGGAAATATTAGTTTAACGGC
TTTTCAGCAAAATATTAATGCCGGTAATTTACCGCAATCAGAAGATGTTGTGAGCAGTGCTTTTAGCTGGTACGGAAAAA
TCATTAATAATTTTACGCCTTGGAAAGGCGGTAAACTTCAGGTAATAGGCAACTATAATTCTGCTGTGGCAACTGCTCAG
GGAAAAAGAATTCCAATTTATAATGTAGACATGGGATTCCAGCAGAAATTAGGAAAAAGCAATGCCAGATTAGGTCTTGT
TGTAACCGATATGTTCAACACTTTAGAAAGCGGTTATAAAAACAATACTCTGCTATTTAGAAACAACAGAACTTCTAAAT
CTGATACCCGTGCTCTTATGCTTACTTTTGCTTATACCTTCAGATCTGATTTTAAAGAAAAGCTGTTAGAAAATCAGTTT
TCTACAGAATAA

Upstream 100 bases:

>100_bases
TTCTTCATTAATTATACTCTAATTGACATATAAGAATAGCTTAATGATATCTTAAGGCAGTTTTTGAGGCTTCATTTAAC
ATGATAGATAACTTTGCTGC

Downstream 100 bases:

>100_bases
ATAATCTCAAAAAACTAAAACTTAAAAAAACAGCATTCTTAATATTTCAGATTCGTCTTTCTATTAAAATTTAAACTATA
TTAGCCTCGAAAAATCTGCC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor; Nb-Dependent Receptor Plug; NB-Dependent Receptor Domain-Containing Protein; NB Dependent Receptor; Protein Containing nB-Dependent Receptor Plug Domain; NB Dependent/Ligand-Gated Channel; Nb-Dependent Outer Membrane Receptor; Outer Membrane Receptor For Ferrienterochelin And Colicin; Outer Membrane Receptor Protein Mostly Fe Transport

Number of amino acids: Translated: 803; Mature: 803

Protein sequence:

>803_residues
MEKWKQNLIAAILLFAISQYSFSQKTNSVTGTISDGKTPLEFVDVVLKPLTDTTKTAAYAVTDSSGKFVLENINSAEYIL
KFRLIGFKSNSQKIKYTGTPISLGNIVLQEDANLLNTVVVNSQKKQIQKTNEGFVFNAVSNISQTGGTAIDMLKNIPTVA
VDADDAISLRGKTPLILINGKNSAVTNMNQIPASSIESIEIITSPTAKYDANAESGIINIKLKKNNLNGLNGAAVLGGGF
GAKGRMNSSVLLNNKTDKWNIGLAYDNRFAGRTKSIKGERTNYFIDDEHFINQSRSDERTEGLQNLKLNVDFSPNDRNTI
SFEALGNMESQDNDETLKTDILNSSNQFYSSNKRHSLELERSKAAEFAFNYDRKFSDDRKSLTASITTSYNFHRENTDID
TDNYDKNYAPIGDTFWQRTHNYEKENISNAIVNYAFTISEKSIIETGYKGTFRLFNSDFQSADLINGEYVVNPMVSNIFD
FNEQINAVYVLWNSYSGSKENQKWKYNLGLRAENVSNNGATQNNSDHFSNDYLKIFPSGSVQLNLKSDEFLKFGYSKRIN
RPDLDDLNPFIDITDALNPHGGNPYLKPEIIYIVELSYNKDWDKYSLSGNAFYRNANNTIRQYGVLQDNGVILLQPQNIG
NTVTYGLETIFSFKPISFYDGNISLTAFQQNINAGNLPQSEDVVSSAFSWYGKIINNFTPWKGGKLQVIGNYNSAVATAQ
GKRIPIYNVDMGFQQKLGKSNARLGLVVTDMFNTLESGYKNNTLLFRNNRTSKSDTRALMLTFAYTFRSDFKEKLLENQF
STE

Sequences:

>Translated_803_residues
MEKWKQNLIAAILLFAISQYSFSQKTNSVTGTISDGKTPLEFVDVVLKPLTDTTKTAAYAVTDSSGKFVLENINSAEYIL
KFRLIGFKSNSQKIKYTGTPISLGNIVLQEDANLLNTVVVNSQKKQIQKTNEGFVFNAVSNISQTGGTAIDMLKNIPTVA
VDADDAISLRGKTPLILINGKNSAVTNMNQIPASSIESIEIITSPTAKYDANAESGIINIKLKKNNLNGLNGAAVLGGGF
GAKGRMNSSVLLNNKTDKWNIGLAYDNRFAGRTKSIKGERTNYFIDDEHFINQSRSDERTEGLQNLKLNVDFSPNDRNTI
SFEALGNMESQDNDETLKTDILNSSNQFYSSNKRHSLELERSKAAEFAFNYDRKFSDDRKSLTASITTSYNFHRENTDID
TDNYDKNYAPIGDTFWQRTHNYEKENISNAIVNYAFTISEKSIIETGYKGTFRLFNSDFQSADLINGEYVVNPMVSNIFD
FNEQINAVYVLWNSYSGSKENQKWKYNLGLRAENVSNNGATQNNSDHFSNDYLKIFPSGSVQLNLKSDEFLKFGYSKRIN
RPDLDDLNPFIDITDALNPHGGNPYLKPEIIYIVELSYNKDWDKYSLSGNAFYRNANNTIRQYGVLQDNGVILLQPQNIG
NTVTYGLETIFSFKPISFYDGNISLTAFQQNINAGNLPQSEDVVSSAFSWYGKIINNFTPWKGGKLQVIGNYNSAVATAQ
GKRIPIYNVDMGFQQKLGKSNARLGLVVTDMFNTLESGYKNNTLLFRNNRTSKSDTRALMLTFAYTFRSDFKEKLLENQF
STE
>Mature_803_residues
MEKWKQNLIAAILLFAISQYSFSQKTNSVTGTISDGKTPLEFVDVVLKPLTDTTKTAAYAVTDSSGKFVLENINSAEYIL
KFRLIGFKSNSQKIKYTGTPISLGNIVLQEDANLLNTVVVNSQKKQIQKTNEGFVFNAVSNISQTGGTAIDMLKNIPTVA
VDADDAISLRGKTPLILINGKNSAVTNMNQIPASSIESIEIITSPTAKYDANAESGIINIKLKKNNLNGLNGAAVLGGGF
GAKGRMNSSVLLNNKTDKWNIGLAYDNRFAGRTKSIKGERTNYFIDDEHFINQSRSDERTEGLQNLKLNVDFSPNDRNTI
SFEALGNMESQDNDETLKTDILNSSNQFYSSNKRHSLELERSKAAEFAFNYDRKFSDDRKSLTASITTSYNFHRENTDID
TDNYDKNYAPIGDTFWQRTHNYEKENISNAIVNYAFTISEKSIIETGYKGTFRLFNSDFQSADLINGEYVVNPMVSNIFD
FNEQINAVYVLWNSYSGSKENQKWKYNLGLRAENVSNNGATQNNSDHFSNDYLKIFPSGSVQLNLKSDEFLKFGYSKRIN
RPDLDDLNPFIDITDALNPHGGNPYLKPEIIYIVELSYNKDWDKYSLSGNAFYRNANNTIRQYGVLQDNGVILLQPQNIG
NTVTYGLETIFSFKPISFYDGNISLTAFQQNINAGNLPQSEDVVSSAFSWYGKIINNFTPWKGGKLQVIGNYNSAVATAQ
GKRIPIYNVDMGFQQKLGKSNARLGLVVTDMFNTLESGYKNNTLLFRNNRTSKSDTRALMLTFAYTFRSDFKEKLLENQF
STE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90050; Mature: 90050

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKWKQNLIAAILLFAISQYSFSQKTNSVTGTISDGKTPLEFVDVVLKPLTDTTKTAAYA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEE
VTDSSGKFVLENINSAEYILKFRLIGFKSNSQKIKYTGTPISLGNIVLQEDANLLNTVVV
EECCCCCEEEECCCCCEEEEEEEEEEECCCCCEEEEECCCEEECCEEEECCCCEEEHEEE
NSQKKQIQKTNEGFVFNAVSNISQTGGTAIDMLKNIPTVAVDADDAISLRGKTPLILING
CCHHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHHCCCEEEECCCCCEEECCCCCEEEEEC
KNSAVTNMNQIPASSIESIEIITSPTAKYDANAESGIINIKLKKNNLNGLNGAAVLGGGF
CCCCCCCCHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCC
GAKGRMNSSVLLNNKTDKWNIGLAYDNRFAGRTKSIKGERTNYFIDDEHFINQSRSDERT
CCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCHHH
EGLQNLKLNVDFSPNDRNTISFEALGNMESQDNDETLKTDILNSSNQFYSSNKRHSLELE
CCHHEEEEEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEH
RSKAAEFAFNYDRKFSDDRKSLTASITTSYNFHRENTDIDTDNYDKNYAPIGDTFWQRTH
HHHHHHEEECCCCCCCCCCHHEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHC
NYEKENISNAIVNYAFTISEKSIIETGYKGTFRLFNSDFQSADLINGEYVVNPMVSNIFD
CCCHHHHHHHHEEEEEEECCCHHHHCCCCCEEEEECCCCCCCCCCCCCEEECHHHHHHHC
FNEQINAVYVLWNSYSGSKENQKWKYNLGLRAENVSNNGATQNNSDHFSNDYLKIFPSGS
CCCCCCEEEEEEECCCCCCCCCCEEEEECEEEECCCCCCCCCCCCCCCCCCEEEEECCCE
VQLNLKSDEFLKFGYSKRINRPDLDDLNPFIDITDALNPHGGNPYLKPEIIYIVELSYNK
EEEEECCCHHHHCCHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEEECCC
DWDKYSLSGNAFYRNANNTIRQYGVLQDNGVILLQPQNIGNTVTYGLETIFSFKPISFYD
CCCEEECCCCEEEECCCCHHHHCCEEECCCEEEEECCCCCCEEHHHHHHHHCCCCCEEEC
GNISLTAFQQNINAGNLPQSEDVVSSAFSWYGKIINNFTPWKGGKLQVIGNYNSAVATAQ
CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECC
GKRIPIYNVDMGFQQKLGKSNARLGLVVTDMFNTLESGYKNNTLLFRNNRTSKSDTRALM
CCCCEEEECCCCHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEE
LTFAYTFRSDFKEKLLENQFSTE
EEEHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEKWKQNLIAAILLFAISQYSFSQKTNSVTGTISDGKTPLEFVDVVLKPLTDTTKTAAYA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEE
VTDSSGKFVLENINSAEYILKFRLIGFKSNSQKIKYTGTPISLGNIVLQEDANLLNTVVV
EECCCCCEEEECCCCCEEEEEEEEEEECCCCCEEEEECCCEEECCEEEECCCCEEEHEEE
NSQKKQIQKTNEGFVFNAVSNISQTGGTAIDMLKNIPTVAVDADDAISLRGKTPLILING
CCHHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHHCCCEEEECCCCCEEECCCCCEEEEEC
KNSAVTNMNQIPASSIESIEIITSPTAKYDANAESGIINIKLKKNNLNGLNGAAVLGGGF
CCCCCCCCHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCC
GAKGRMNSSVLLNNKTDKWNIGLAYDNRFAGRTKSIKGERTNYFIDDEHFINQSRSDERT
CCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCHHH
EGLQNLKLNVDFSPNDRNTISFEALGNMESQDNDETLKTDILNSSNQFYSSNKRHSLELE
CCHHEEEEEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEH
RSKAAEFAFNYDRKFSDDRKSLTASITTSYNFHRENTDIDTDNYDKNYAPIGDTFWQRTH
HHHHHHEEECCCCCCCCCCHHEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHC
NYEKENISNAIVNYAFTISEKSIIETGYKGTFRLFNSDFQSADLINGEYVVNPMVSNIFD
CCCHHHHHHHHEEEEEEECCCHHHHCCCCCEEEEECCCCCCCCCCCCCEEECHHHHHHHC
FNEQINAVYVLWNSYSGSKENQKWKYNLGLRAENVSNNGATQNNSDHFSNDYLKIFPSGS
CCCCCCEEEEEEECCCCCCCCCCEEEEECEEEECCCCCCCCCCCCCCCCCCEEEEECCCE
VQLNLKSDEFLKFGYSKRINRPDLDDLNPFIDITDALNPHGGNPYLKPEIIYIVELSYNK
EEEEECCCHHHHCCHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEEECCC
DWDKYSLSGNAFYRNANNTIRQYGVLQDNGVILLQPQNIGNTVTYGLETIFSFKPISFYD
CCCEEECCCCEEEECCCCHHHHCCEEECCCEEEEECCCCCCEEHHHHHHHHCCCCCEEEC
GNISLTAFQQNINAGNLPQSEDVVSSAFSWYGKIINNFTPWKGGKLQVIGNYNSAVATAQ
CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECC
GKRIPIYNVDMGFQQKLGKSNARLGLVVTDMFNTLESGYKNNTLLFRNNRTSKSDTRALM
CCCCEEEECCCCHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEE
LTFAYTFRSDFKEKLLENQFSTE
EEEHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA