| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302453
Identifier: 146302453
GI number: 146302453
Start: 5710248
End: 5712659
Strand: Direct
Name: 146302453
Synonym: Fjoh_4726
Alternate gene names: NA
Gene position: 5710248-5712659 (Clockwise)
Preceding gene: 146302451
Following gene: 146302454
Centisome position: 93.66
GC content: 32.71
Gene sequence:
>2412_bases ATGGAAAAATGGAAACAAAATTTAATCGCCGCAATTCTCTTATTTGCTATAAGCCAATACTCATTTAGTCAAAAAACAAA TTCTGTTACCGGAACTATTTCAGACGGTAAAACTCCTCTTGAATTTGTCGATGTAGTTTTAAAACCTCTTACAGATACTA CAAAAACAGCAGCGTATGCTGTTACAGATTCGTCAGGAAAATTTGTTCTTGAAAATATCAACTCAGCAGAATATATTTTA AAATTTCGTTTAATTGGTTTCAAATCAAATAGTCAGAAAATAAAATATACAGGAACTCCTATTTCGCTTGGAAATATTGT TTTGCAGGAAGATGCCAATCTTCTTAATACGGTAGTTGTAAATTCTCAGAAAAAGCAGATTCAAAAAACAAACGAAGGTT TTGTTTTTAATGCCGTTTCTAATATATCACAAACCGGCGGCACTGCAATTGATATGCTCAAAAATATCCCAACTGTTGCT GTTGATGCAGACGATGCTATTTCACTTAGAGGAAAAACACCTTTAATTTTAATTAATGGAAAAAATTCTGCTGTTACAAA TATGAATCAGATTCCGGCAAGCAGTATCGAAAGTATCGAAATCATTACAAGTCCAACAGCAAAATATGATGCCAATGCCG AAAGTGGAATCATCAATATTAAATTAAAGAAAAACAACTTAAACGGATTAAACGGTGCGGCTGTTCTGGGCGGCGGATTT GGAGCAAAAGGAAGAATGAACAGCTCTGTACTTTTAAACAATAAAACCGATAAATGGAATATTGGTCTTGCGTATGATAA TCGTTTTGCCGGAAGAACCAAGAGTATTAAAGGTGAAAGAACGAATTACTTCATTGATGATGAACATTTTATTAATCAGA GCAGAAGTGATGAAAGAACTGAAGGTCTGCAGAATTTAAAACTGAACGTTGATTTTTCACCAAATGACAGAAATACTATT TCTTTTGAAGCACTTGGAAACATGGAAAGTCAGGATAATGATGAAACCTTAAAAACAGATATTCTCAATAGTTCTAATCA GTTTTACTCTAGTAATAAACGTCATTCCCTGGAATTAGAACGTTCTAAAGCTGCAGAATTTGCTTTTAATTACGATCGAA AGTTTTCTGATGACAGAAAAAGTTTAACTGCAAGTATTACCACCTCATACAATTTCCACAGAGAAAATACCGATATCGAC ACAGATAATTATGATAAAAATTATGCACCAATTGGCGATACTTTTTGGCAGCGAACACATAATTATGAAAAAGAAAATAT TTCGAATGCAATTGTAAACTATGCTTTTACTATTTCAGAAAAATCTATAATTGAAACCGGATATAAAGGAACTTTTAGAC TTTTTAATTCAGATTTTCAAAGTGCAGACCTTATAAATGGTGAGTATGTGGTAAATCCGATGGTGAGTAATATTTTTGAT TTTAATGAGCAGATAAATGCCGTTTATGTACTTTGGAATTCGTATTCAGGTTCTAAGGAAAATCAAAAATGGAAATACAA TTTAGGACTTCGTGCAGAAAATGTTTCTAACAATGGGGCAACACAAAACAATAGTGATCATTTTAGCAATGATTATTTAA AAATTTTCCCTTCCGGATCTGTACAATTGAATTTAAAATCTGATGAATTTTTAAAATTTGGTTACAGTAAACGTATTAAT CGTCCGGATTTAGATGATTTAAATCCTTTTATTGATATTACAGACGCTTTGAATCCGCATGGAGGAAATCCATATTTAAA GCCTGAAATTATATATATTGTAGAATTAAGCTACAATAAAGACTGGGACAAATATTCTCTTTCCGGAAATGCTTTTTACA GAAATGCCAATAATACGATTAGACAATACGGTGTTCTTCAAGATAACGGAGTGATTTTATTGCAGCCACAAAACATTGGA AATACAGTTACGTACGGACTTGAAACTATTTTCAGCTTTAAGCCAATTTCTTTCTACGATGGAAATATTAGTTTAACGGC TTTTCAGCAAAATATTAATGCCGGTAATTTACCGCAATCAGAAGATGTTGTGAGCAGTGCTTTTAGCTGGTACGGAAAAA TCATTAATAATTTTACGCCTTGGAAAGGCGGTAAACTTCAGGTAATAGGCAACTATAATTCTGCTGTGGCAACTGCTCAG GGAAAAAGAATTCCAATTTATAATGTAGACATGGGATTCCAGCAGAAATTAGGAAAAAGCAATGCCAGATTAGGTCTTGT TGTAACCGATATGTTCAACACTTTAGAAAGCGGTTATAAAAACAATACTCTGCTATTTAGAAACAACAGAACTTCTAAAT CTGATACCCGTGCTCTTATGCTTACTTTTGCTTATACCTTCAGATCTGATTTTAAAGAAAAGCTGTTAGAAAATCAGTTT TCTACAGAATAA
Upstream 100 bases:
>100_bases TTCTTCATTAATTATACTCTAATTGACATATAAGAATAGCTTAATGATATCTTAAGGCAGTTTTTGAGGCTTCATTTAAC ATGATAGATAACTTTGCTGC
Downstream 100 bases:
>100_bases ATAATCTCAAAAAACTAAAACTTAAAAAAACAGCATTCTTAATATTTCAGATTCGTCTTTCTATTAAAATTTAAACTATA TTAGCCTCGAAAAATCTGCC
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor; Nb-Dependent Receptor Plug; NB-Dependent Receptor Domain-Containing Protein; NB Dependent Receptor; Protein Containing nB-Dependent Receptor Plug Domain; NB Dependent/Ligand-Gated Channel; Nb-Dependent Outer Membrane Receptor; Outer Membrane Receptor For Ferrienterochelin And Colicin; Outer Membrane Receptor Protein Mostly Fe Transport
Number of amino acids: Translated: 803; Mature: 803
Protein sequence:
>803_residues MEKWKQNLIAAILLFAISQYSFSQKTNSVTGTISDGKTPLEFVDVVLKPLTDTTKTAAYAVTDSSGKFVLENINSAEYIL KFRLIGFKSNSQKIKYTGTPISLGNIVLQEDANLLNTVVVNSQKKQIQKTNEGFVFNAVSNISQTGGTAIDMLKNIPTVA VDADDAISLRGKTPLILINGKNSAVTNMNQIPASSIESIEIITSPTAKYDANAESGIINIKLKKNNLNGLNGAAVLGGGF GAKGRMNSSVLLNNKTDKWNIGLAYDNRFAGRTKSIKGERTNYFIDDEHFINQSRSDERTEGLQNLKLNVDFSPNDRNTI SFEALGNMESQDNDETLKTDILNSSNQFYSSNKRHSLELERSKAAEFAFNYDRKFSDDRKSLTASITTSYNFHRENTDID TDNYDKNYAPIGDTFWQRTHNYEKENISNAIVNYAFTISEKSIIETGYKGTFRLFNSDFQSADLINGEYVVNPMVSNIFD FNEQINAVYVLWNSYSGSKENQKWKYNLGLRAENVSNNGATQNNSDHFSNDYLKIFPSGSVQLNLKSDEFLKFGYSKRIN RPDLDDLNPFIDITDALNPHGGNPYLKPEIIYIVELSYNKDWDKYSLSGNAFYRNANNTIRQYGVLQDNGVILLQPQNIG NTVTYGLETIFSFKPISFYDGNISLTAFQQNINAGNLPQSEDVVSSAFSWYGKIINNFTPWKGGKLQVIGNYNSAVATAQ GKRIPIYNVDMGFQQKLGKSNARLGLVVTDMFNTLESGYKNNTLLFRNNRTSKSDTRALMLTFAYTFRSDFKEKLLENQF STE
Sequences:
>Translated_803_residues MEKWKQNLIAAILLFAISQYSFSQKTNSVTGTISDGKTPLEFVDVVLKPLTDTTKTAAYAVTDSSGKFVLENINSAEYIL KFRLIGFKSNSQKIKYTGTPISLGNIVLQEDANLLNTVVVNSQKKQIQKTNEGFVFNAVSNISQTGGTAIDMLKNIPTVA VDADDAISLRGKTPLILINGKNSAVTNMNQIPASSIESIEIITSPTAKYDANAESGIINIKLKKNNLNGLNGAAVLGGGF GAKGRMNSSVLLNNKTDKWNIGLAYDNRFAGRTKSIKGERTNYFIDDEHFINQSRSDERTEGLQNLKLNVDFSPNDRNTI SFEALGNMESQDNDETLKTDILNSSNQFYSSNKRHSLELERSKAAEFAFNYDRKFSDDRKSLTASITTSYNFHRENTDID TDNYDKNYAPIGDTFWQRTHNYEKENISNAIVNYAFTISEKSIIETGYKGTFRLFNSDFQSADLINGEYVVNPMVSNIFD FNEQINAVYVLWNSYSGSKENQKWKYNLGLRAENVSNNGATQNNSDHFSNDYLKIFPSGSVQLNLKSDEFLKFGYSKRIN RPDLDDLNPFIDITDALNPHGGNPYLKPEIIYIVELSYNKDWDKYSLSGNAFYRNANNTIRQYGVLQDNGVILLQPQNIG NTVTYGLETIFSFKPISFYDGNISLTAFQQNINAGNLPQSEDVVSSAFSWYGKIINNFTPWKGGKLQVIGNYNSAVATAQ GKRIPIYNVDMGFQQKLGKSNARLGLVVTDMFNTLESGYKNNTLLFRNNRTSKSDTRALMLTFAYTFRSDFKEKLLENQF STE >Mature_803_residues MEKWKQNLIAAILLFAISQYSFSQKTNSVTGTISDGKTPLEFVDVVLKPLTDTTKTAAYAVTDSSGKFVLENINSAEYIL KFRLIGFKSNSQKIKYTGTPISLGNIVLQEDANLLNTVVVNSQKKQIQKTNEGFVFNAVSNISQTGGTAIDMLKNIPTVA VDADDAISLRGKTPLILINGKNSAVTNMNQIPASSIESIEIITSPTAKYDANAESGIINIKLKKNNLNGLNGAAVLGGGF GAKGRMNSSVLLNNKTDKWNIGLAYDNRFAGRTKSIKGERTNYFIDDEHFINQSRSDERTEGLQNLKLNVDFSPNDRNTI SFEALGNMESQDNDETLKTDILNSSNQFYSSNKRHSLELERSKAAEFAFNYDRKFSDDRKSLTASITTSYNFHRENTDID TDNYDKNYAPIGDTFWQRTHNYEKENISNAIVNYAFTISEKSIIETGYKGTFRLFNSDFQSADLINGEYVVNPMVSNIFD FNEQINAVYVLWNSYSGSKENQKWKYNLGLRAENVSNNGATQNNSDHFSNDYLKIFPSGSVQLNLKSDEFLKFGYSKRIN RPDLDDLNPFIDITDALNPHGGNPYLKPEIIYIVELSYNKDWDKYSLSGNAFYRNANNTIRQYGVLQDNGVILLQPQNIG NTVTYGLETIFSFKPISFYDGNISLTAFQQNINAGNLPQSEDVVSSAFSWYGKIINNFTPWKGGKLQVIGNYNSAVATAQ GKRIPIYNVDMGFQQKLGKSNARLGLVVTDMFNTLESGYKNNTLLFRNNRTSKSDTRALMLTFAYTFRSDFKEKLLENQF STE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90050; Mature: 90050
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKWKQNLIAAILLFAISQYSFSQKTNSVTGTISDGKTPLEFVDVVLKPLTDTTKTAAYA CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEE VTDSSGKFVLENINSAEYILKFRLIGFKSNSQKIKYTGTPISLGNIVLQEDANLLNTVVV EECCCCCEEEECCCCCEEEEEEEEEEECCCCCEEEEECCCEEECCEEEECCCCEEEHEEE NSQKKQIQKTNEGFVFNAVSNISQTGGTAIDMLKNIPTVAVDADDAISLRGKTPLILING CCHHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHHCCCEEEECCCCCEEECCCCCEEEEEC KNSAVTNMNQIPASSIESIEIITSPTAKYDANAESGIINIKLKKNNLNGLNGAAVLGGGF CCCCCCCCHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCC GAKGRMNSSVLLNNKTDKWNIGLAYDNRFAGRTKSIKGERTNYFIDDEHFINQSRSDERT CCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCHHH EGLQNLKLNVDFSPNDRNTISFEALGNMESQDNDETLKTDILNSSNQFYSSNKRHSLELE CCHHEEEEEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEH RSKAAEFAFNYDRKFSDDRKSLTASITTSYNFHRENTDIDTDNYDKNYAPIGDTFWQRTH HHHHHHEEECCCCCCCCCCHHEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHC NYEKENISNAIVNYAFTISEKSIIETGYKGTFRLFNSDFQSADLINGEYVVNPMVSNIFD CCCHHHHHHHHEEEEEEECCCHHHHCCCCCEEEEECCCCCCCCCCCCCEEECHHHHHHHC FNEQINAVYVLWNSYSGSKENQKWKYNLGLRAENVSNNGATQNNSDHFSNDYLKIFPSGS CCCCCCEEEEEEECCCCCCCCCCEEEEECEEEECCCCCCCCCCCCCCCCCCEEEEECCCE VQLNLKSDEFLKFGYSKRINRPDLDDLNPFIDITDALNPHGGNPYLKPEIIYIVELSYNK EEEEECCCHHHHCCHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEEECCC DWDKYSLSGNAFYRNANNTIRQYGVLQDNGVILLQPQNIGNTVTYGLETIFSFKPISFYD CCCEEECCCCEEEECCCCHHHHCCEEECCCEEEEECCCCCCEEHHHHHHHHCCCCCEEEC GNISLTAFQQNINAGNLPQSEDVVSSAFSWYGKIINNFTPWKGGKLQVIGNYNSAVATAQ CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECC GKRIPIYNVDMGFQQKLGKSNARLGLVVTDMFNTLESGYKNNTLLFRNNRTSKSDTRALM CCCCEEEECCCCHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEE LTFAYTFRSDFKEKLLENQFSTE EEEHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEKWKQNLIAAILLFAISQYSFSQKTNSVTGTISDGKTPLEFVDVVLKPLTDTTKTAAYA CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEE VTDSSGKFVLENINSAEYILKFRLIGFKSNSQKIKYTGTPISLGNIVLQEDANLLNTVVV EECCCCCEEEECCCCCEEEEEEEEEEECCCCCEEEEECCCEEECCEEEECCCCEEEHEEE NSQKKQIQKTNEGFVFNAVSNISQTGGTAIDMLKNIPTVAVDADDAISLRGKTPLILING CCHHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHHCCCEEEECCCCCEEECCCCCEEEEEC KNSAVTNMNQIPASSIESIEIITSPTAKYDANAESGIINIKLKKNNLNGLNGAAVLGGGF CCCCCCCCHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCC GAKGRMNSSVLLNNKTDKWNIGLAYDNRFAGRTKSIKGERTNYFIDDEHFINQSRSDERT CCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCHHH EGLQNLKLNVDFSPNDRNTISFEALGNMESQDNDETLKTDILNSSNQFYSSNKRHSLELE CCHHEEEEEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEH RSKAAEFAFNYDRKFSDDRKSLTASITTSYNFHRENTDIDTDNYDKNYAPIGDTFWQRTH HHHHHHEEECCCCCCCCCCHHEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHC NYEKENISNAIVNYAFTISEKSIIETGYKGTFRLFNSDFQSADLINGEYVVNPMVSNIFD CCCHHHHHHHHEEEEEEECCCHHHHCCCCCEEEEECCCCCCCCCCCCCEEECHHHHHHHC FNEQINAVYVLWNSYSGSKENQKWKYNLGLRAENVSNNGATQNNSDHFSNDYLKIFPSGS CCCCCCEEEEEEECCCCCCCCCCEEEEECEEEECCCCCCCCCCCCCCCCCCEEEEECCCE VQLNLKSDEFLKFGYSKRINRPDLDDLNPFIDITDALNPHGGNPYLKPEIIYIVELSYNK EEEEECCCHHHHCCHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEEECCC DWDKYSLSGNAFYRNANNTIRQYGVLQDNGVILLQPQNIGNTVTYGLETIFSFKPISFYD CCCEEECCCCEEEECCCCHHHHCCEEECCCEEEEECCCCCCEEHHHHHHHHCCCCCEEEC GNISLTAFQQNINAGNLPQSEDVVSSAFSWYGKIINNFTPWKGGKLQVIGNYNSAVATAQ CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECC GKRIPIYNVDMGFQQKLGKSNARLGLVVTDMFNTLESGYKNNTLLFRNNRTSKSDTRALM CCCCEEEECCCCHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEE LTFAYTFRSDFKEKLLENQFSTE EEEHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA