| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yegJ [C]
Identifier: 146302408
GI number: 146302408
Start: 5663301
End: 5664050
Strand: Direct
Name: yegJ [C]
Synonym: Fjoh_4681
Alternate gene names: 146302408
Gene position: 5663301-5664050 (Clockwise)
Preceding gene: 146302407
Following gene: 146302409
Centisome position: 92.89
GC content: 36.8
Gene sequence:
>750_bases ATGGAAAACACACCAATATTCTTTGCCGATGGAGAAAATCCAAAAATGATCGAAGCCTACAAAAAAGCACAAGAAACCTT TAAATATTTCTGGAGAGAATTATCGTGGGAATACCGCAGAATAATTCCCGGACTAGACGTTGCCTGCGTAAAACTGGCAT TTACTCAGGAAATAGACGGTGAAACTGTTGTAGAACACATGTGGATTAACGACGTAAATTTTGACGGTGATATTATTTAT GGAACTTTGGTAAACCAGCCAAACGAATTAACGAATGTAAATAATGGAGACGAAGTTGAAATTCCGGTAAACCAAATCAG CGACTGGTTATTTGCAAGCCAGGGAAAAACTTACGGAGCTTTTACCATACACGCCATGCGATCTGAAATGAGCGAAGATG AAAGAAATGAACATGATGATGCCTGGGGATTAGATTTTGGAGATTACAACGATATTTTGGTAGTGTCTGACCAAAATGAA AAACCAGAAAATCTTGTAGAACATCCTATGAGCAAAAACATGAAAGAGAGCCTTATCGATTTTGTAAAAAACAATCCGGA AGAACTTACTTCGCAAGATGAATTGGGTTATACTTTTCTACATCGCGAAACTATTGCAGGAAATAGTACATCTGTCGAAG TTTTACTAGAATCTGGAGCAGACAAAAATGCTAAAAATCATCTGGGTAAAACAGCTTTAGATTATGCGGCAGAACTAAAA TGGAATCACTTGATACCATTATTTAAATAA
Upstream 100 bases:
>100_bases GCTTCTTTTGATGATTAAAAAACCGATTTGCAAAACAAATCGGTTTTTTATTCGTTAAAAATAGCACAATCACAAAAAGT TACTTTATAAAAAATATACA
Downstream 100 bases:
>100_bases AATAAAAAATCCGATTTACGTTTTGTTAAATCGGATTTTTTATTTTTAAAACATAAACAAAATCTTACTTTTGAAATTTA TTTTAAAGTTTATAAAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MENTPIFFADGENPKMIEAYKKAQETFKYFWRELSWEYRRIIPGLDVACVKLAFTQEIDGETVVEHMWINDVNFDGDIIY GTLVNQPNELTNVNNGDEVEIPVNQISDWLFASQGKTYGAFTIHAMRSEMSEDERNEHDDAWGLDFGDYNDILVVSDQNE KPENLVEHPMSKNMKESLIDFVKNNPEELTSQDELGYTFLHRETIAGNSTSVEVLLESGADKNAKNHLGKTALDYAAELK WNHLIPLFK
Sequences:
>Translated_249_residues MENTPIFFADGENPKMIEAYKKAQETFKYFWRELSWEYRRIIPGLDVACVKLAFTQEIDGETVVEHMWINDVNFDGDIIY GTLVNQPNELTNVNNGDEVEIPVNQISDWLFASQGKTYGAFTIHAMRSEMSEDERNEHDDAWGLDFGDYNDILVVSDQNE KPENLVEHPMSKNMKESLIDFVKNNPEELTSQDELGYTFLHRETIAGNSTSVEVLLESGADKNAKNHLGKTALDYAAELK WNHLIPLFK >Mature_249_residues MENTPIFFADGENPKMIEAYKKAQETFKYFWRELSWEYRRIIPGLDVACVKLAFTQEIDGETVVEHMWINDVNFDGDIIY GTLVNQPNELTNVNNGDEVEIPVNQISDWLFASQGKTYGAFTIHAMRSEMSEDERNEHDDAWGLDFGDYNDILVVSDQNE KPENLVEHPMSKNMKESLIDFVKNNPEELTSQDELGYTFLHRETIAGNSTSVEVLLESGADKNAKNHLGKTALDYAAELK WNHLIPLFK
Specific function: Unknown
COG id: COG3779
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ANK repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002110 - InterPro: IPR020683 - InterPro: IPR018756 [H]
Pfam domain/function: PF00023 Ank; PF10077 DUF2314 [H]
EC number: NA
Molecular weight: Translated: 28560; Mature: 28560
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENTPIFFADGENPKMIEAYKKAQETFKYFWRELSWEYRRIIPGLDVACVKLAFTQEIDG CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHCCCC ETVVEHMWINDVNFDGDIIYGTLVNQPNELTNVNNGDEVEIPVNQISDWLFASQGKTYGA HHHHHHHHHCCCCCCCCEEEEEECCCCHHHCCCCCCCEEEEEHHHHHHHHHHCCCCCCEE FTIHAMRSEMSEDERNEHDDAWGLDFGDYNDILVVSDQNEKPENLVEHPMSKNMKESLID EEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCHHCCCHHHHHHH FVKNNPEELTSQDELGYTFLHRETIAGNSTSVEVLLESGADKNAKNHLGKTALDYAAELK HHHCCHHHHCCCCCCCEEEEEHHHHCCCCCEEEEEEECCCCCCHHHHCCHHHHHHHHHCC WNHLIPLFK CCCCCCCCC >Mature Secondary Structure MENTPIFFADGENPKMIEAYKKAQETFKYFWRELSWEYRRIIPGLDVACVKLAFTQEIDG CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHCCCC ETVVEHMWINDVNFDGDIIYGTLVNQPNELTNVNNGDEVEIPVNQISDWLFASQGKTYGA HHHHHHHHHCCCCCCCCEEEEEECCCCHHHCCCCCCCEEEEEHHHHHHHHHHCCCCCCEE FTIHAMRSEMSEDERNEHDDAWGLDFGDYNDILVVSDQNEKPENLVEHPMSKNMKESLID EEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCHHCCCHHHHHHH FVKNNPEELTSQDELGYTFLHRETIAGNSTSVEVLLESGADKNAKNHLGKTALDYAAELK HHHCCHHHHCCCCCCCEEEEEHHHHCCCCCEEEEEEECCCCCCHHHHCCHHHHHHHHHCC WNHLIPLFK CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]