| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302397
Identifier: 146302397
GI number: 146302397
Start: 5648069
End: 5650666
Strand: Direct
Name: 146302397
Synonym: Fjoh_4670
Alternate gene names: NA
Gene position: 5648069-5650666 (Clockwise)
Preceding gene: 146302396
Following gene: 146302398
Centisome position: 92.64
GC content: 34.18
Gene sequence:
>2598_bases ATGAAGGAAAAGGCATTCCTGCATAATGTAAAATTATTCTGCTTACTAATTTTATTATTATTCATTCCTGTTACAGTTCT TGCCCAAAAGAAAAAGAAAAAAGAAACTGAGAGTGAAATTGTAAAAAAAGATTCTACTGACGCCAAAAAAGGCAAAAAAT ATAGCGACCTTATAAAAAAAGGGACTGTTAAAAAAGGACTATTCAATATCATTCAGGTTAAAACCGATGTATATTTTGAA ATTCAGGATAGTTTGTTTAAAAGAGAATTTCTAATTGTAAACAAATTATCTCAGGTTCCTTATGATCTTAACGAAGCTGG ATTAAATAAAGGAATGAATTATGAAAATAAAGTTATTTCCTTTTATAAAGACACTATTGCAAAAAAAGTCTGGGTAAAGA CCTATCAGCCTAAAGTTTCTTCTCCTAAAGATGATGCCATCACAGCATCTGTAATTAATAATTTTGCCGAATCTATTATT GAAGTTTTTGATATCGAAACCAAAAACAACGATTCGAGCGCTGTTGTAATTAAAGTAAACAAGATTTTTGACGGAAAACA AAAAAGCTTTAATGATGTTATGGGCAACATTGGCTTAAACGGTTCTGTAAAATCTGATTTATCCTATATAGAAGGATTAA AATCTTTTCCTAAAAACATTGTTGTAAAATCACAAATGACAACTTCACTAAGCGATGGAGGTGCAACAGTACCCATTACG CTTGGTGTGACAACTAATATTATTTTATTGGATAAAACTCCAATGAAACCTCGTTTTTCTGACAAACGAATTGGTTTTTT TACTGAAAAGCATTGGTACTTTGCCGATGCACAGCAGGCAATGCTTGAAAAAGAATTGATTACCCGCTGGCGTTTAGAAC CAAAGAAAGAAGATGAAGAACGTTATATGAAAGGTGAATTAGTAGAGCCGAAAAAACCAATCGTTTATTACATCGATCCA TCGACTCCAAAACAATGGAGAAAAAACATCATTGATGGGGTACACGATTGGCAGGCAGCTTTTGAAAAAGCCGGATTTAA AAATGCCGTTATTGCAAAAGAACCTACTGAAGAAGATTTAGATTTTGACATTGATGATGTGCGTTATTCTGTTATTACGT ATGCTGCATCGCCAAAATCAAACGCAATGGGACCATCTGTGGTTGATCCAAGAAGTGGTGAAATTATTGAGGCCGATATT ATCTGGTGGCATAATGTAATGACTTCGCTTCAAAGCTGGATGCGTATTCAGACTGGACCAATTGACCCGAAAGCAAGAGG GAACAAATTCAGTGATGAACATATGGGAGAAGCAATTCGTTTTGTTTCGTCTCATGAAGTAGGACACACATTTGGTTTAA AACATAATATGGGCGCTTCTTTCGCTTATGATGTAGAATCTTTAAGATCTAAAGAATTCACAGCAAAAATGGGAGGCACT GCTCCTTCTATCATGGATTATGCCCGATACAATTATGTGGCACAGCCGGAAGACAATGTTACAGTTATTACTCCAAAAAT TGGAGAATATGATAAATATGCAATAGAATGGGGTTACAGATGGTATTCGCCTAACGAAAACGAAACAGCAAAACTAAACG CCTTACTTACAAAACATCAAAATGACCCCATTTATTTTTACGGTGAGCAGCAATCAGGCGTTGCGATTGATCCTCGCTCA CAGTCTGAAGATTTAGGAAATGATGCTGTAAAAGCAAGTGAATACGGTTTAAAAAACTTAAAGCGTGTTGTAGACAATAT TATAAACTGGACGTATGATAAAGATCAGTCTTACTACGAAACTGGTAAACTATATGTTGGAACTATCGGACAATGGCAAA CGTACAATGATCATGTATTAACCAATATTGGCGGTGTTTACTTAAACACTACAGTACACGGCGACAACAAACAAAGTTAC GTTCCGGTTCCTGCAGCAATGCAGAAAAGAGCAGCCGATTATTTAATTAAAAATGTAATTACGATTCCACAGTGGTTGTT TTTCAATGACATTTTAGACAAAACAAATCCGCTGAAAGACTCTCCTCTTGGACCTTATGAGTACACACCATACACAATGG CAAGAGCATTACAGTACGAGATTATGTATAGTTTATTATTTGATGAACGTTTGCTTCGAATGACAGAAAATGAATTATAC CAGCGAAATAAAACCAATGAGAAGGTTTTTACCGTAAATGATTTGTTTAAAAAATTACACCAAAGTGTATTTGCAGGAAC TATCCAAAACAAATCACTTACTATTCTGGAGCGTATGACGCAAAAGAATTATGTAGATGTTTTAATTATTTCGACAAATA AATTATTTGAAAAAACAGATGCTAAAAAAACAATTCAACTTAAAGAAACATTACAAATGCCTCATTTATGTTCTGTAGAT GATGAACATACGGCAAGAAACATTAATAACTATTTTTTGAAAAGAGTTACAGAAGTAACCTCTGATAAAAAAGGAGAATT ATCAAAAGTGCTTCAGTTATTAAAACTAAAAAAGAGCACCGGAGATCAATCGACCCAAAACCATTACCTCGATTTAATAC AACGAATCGAGAAAGCCCTGAATAATACAACCTTTTAA
Upstream 100 bases:
>100_bases TCCATTCACTCCTAAAAAAAAGCCATTCACTCCGTTTTGTTTTTTTTCTGAGCTAAAATCGAATAGTTTCGACGAAAATT AACTTAAACTTAACATCAAA
Downstream 100 bases:
>100_bases TAATTACAAACCCAAAACATGAAAAAAATTCTACATGCCTTACTGCTGTTCCTGGCCATCGCAGGATACTCGCAGGAAAC CCGAACTATTACGGGGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 865; Mature: 865
Protein sequence:
>865_residues MKEKAFLHNVKLFCLLILLLFIPVTVLAQKKKKKETESEIVKKDSTDAKKGKKYSDLIKKGTVKKGLFNIIQVKTDVYFE IQDSLFKREFLIVNKLSQVPYDLNEAGLNKGMNYENKVISFYKDTIAKKVWVKTYQPKVSSPKDDAITASVINNFAESII EVFDIETKNNDSSAVVIKVNKIFDGKQKSFNDVMGNIGLNGSVKSDLSYIEGLKSFPKNIVVKSQMTTSLSDGGATVPIT LGVTTNIILLDKTPMKPRFSDKRIGFFTEKHWYFADAQQAMLEKELITRWRLEPKKEDEERYMKGELVEPKKPIVYYIDP STPKQWRKNIIDGVHDWQAAFEKAGFKNAVIAKEPTEEDLDFDIDDVRYSVITYAASPKSNAMGPSVVDPRSGEIIEADI IWWHNVMTSLQSWMRIQTGPIDPKARGNKFSDEHMGEAIRFVSSHEVGHTFGLKHNMGASFAYDVESLRSKEFTAKMGGT APSIMDYARYNYVAQPEDNVTVITPKIGEYDKYAIEWGYRWYSPNENETAKLNALLTKHQNDPIYFYGEQQSGVAIDPRS QSEDLGNDAVKASEYGLKNLKRVVDNIINWTYDKDQSYYETGKLYVGTIGQWQTYNDHVLTNIGGVYLNTTVHGDNKQSY VPVPAAMQKRAADYLIKNVITIPQWLFFNDILDKTNPLKDSPLGPYEYTPYTMARALQYEIMYSLLFDERLLRMTENELY QRNKTNEKVFTVNDLFKKLHQSVFAGTIQNKSLTILERMTQKNYVDVLIISTNKLFEKTDAKKTIQLKETLQMPHLCSVD DEHTARNINNYFLKRVTEVTSDKKGELSKVLQLLKLKKSTGDQSTQNHYLDLIQRIEKALNNTTF
Sequences:
>Translated_865_residues MKEKAFLHNVKLFCLLILLLFIPVTVLAQKKKKKETESEIVKKDSTDAKKGKKYSDLIKKGTVKKGLFNIIQVKTDVYFE IQDSLFKREFLIVNKLSQVPYDLNEAGLNKGMNYENKVISFYKDTIAKKVWVKTYQPKVSSPKDDAITASVINNFAESII EVFDIETKNNDSSAVVIKVNKIFDGKQKSFNDVMGNIGLNGSVKSDLSYIEGLKSFPKNIVVKSQMTTSLSDGGATVPIT LGVTTNIILLDKTPMKPRFSDKRIGFFTEKHWYFADAQQAMLEKELITRWRLEPKKEDEERYMKGELVEPKKPIVYYIDP STPKQWRKNIIDGVHDWQAAFEKAGFKNAVIAKEPTEEDLDFDIDDVRYSVITYAASPKSNAMGPSVVDPRSGEIIEADI IWWHNVMTSLQSWMRIQTGPIDPKARGNKFSDEHMGEAIRFVSSHEVGHTFGLKHNMGASFAYDVESLRSKEFTAKMGGT APSIMDYARYNYVAQPEDNVTVITPKIGEYDKYAIEWGYRWYSPNENETAKLNALLTKHQNDPIYFYGEQQSGVAIDPRS QSEDLGNDAVKASEYGLKNLKRVVDNIINWTYDKDQSYYETGKLYVGTIGQWQTYNDHVLTNIGGVYLNTTVHGDNKQSY VPVPAAMQKRAADYLIKNVITIPQWLFFNDILDKTNPLKDSPLGPYEYTPYTMARALQYEIMYSLLFDERLLRMTENELY QRNKTNEKVFTVNDLFKKLHQSVFAGTIQNKSLTILERMTQKNYVDVLIISTNKLFEKTDAKKTIQLKETLQMPHLCSVD DEHTARNINNYFLKRVTEVTSDKKGELSKVLQLLKLKKSTGDQSTQNHYLDLIQRIEKALNNTTF >Mature_865_residues MKEKAFLHNVKLFCLLILLLFIPVTVLAQKKKKKETESEIVKKDSTDAKKGKKYSDLIKKGTVKKGLFNIIQVKTDVYFE IQDSLFKREFLIVNKLSQVPYDLNEAGLNKGMNYENKVISFYKDTIAKKVWVKTYQPKVSSPKDDAITASVINNFAESII EVFDIETKNNDSSAVVIKVNKIFDGKQKSFNDVMGNIGLNGSVKSDLSYIEGLKSFPKNIVVKSQMTTSLSDGGATVPIT LGVTTNIILLDKTPMKPRFSDKRIGFFTEKHWYFADAQQAMLEKELITRWRLEPKKEDEERYMKGELVEPKKPIVYYIDP STPKQWRKNIIDGVHDWQAAFEKAGFKNAVIAKEPTEEDLDFDIDDVRYSVITYAASPKSNAMGPSVVDPRSGEIIEADI IWWHNVMTSLQSWMRIQTGPIDPKARGNKFSDEHMGEAIRFVSSHEVGHTFGLKHNMGASFAYDVESLRSKEFTAKMGGT APSIMDYARYNYVAQPEDNVTVITPKIGEYDKYAIEWGYRWYSPNENETAKLNALLTKHQNDPIYFYGEQQSGVAIDPRS QSEDLGNDAVKASEYGLKNLKRVVDNIINWTYDKDQSYYETGKLYVGTIGQWQTYNDHVLTNIGGVYLNTTVHGDNKQSY VPVPAAMQKRAADYLIKNVITIPQWLFFNDILDKTNPLKDSPLGPYEYTPYTMARALQYEIMYSLLFDERLLRMTENELY QRNKTNEKVFTVNDLFKKLHQSVFAGTIQNKSLTILERMTQKNYVDVLIISTNKLFEKTDAKKTIQLKETLQMPHLCSVD DEHTARNINNYFLKRVTEVTSDKKGELSKVLQLLKLKKSTGDQSTQNHYLDLIQRIEKALNNTTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99052; Mature: 99052
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKAFLHNVKLFCLLILLLFIPVTVLAQKKKKKETESEIVKKDSTDAKKGKKYSDLIKK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHH GTVKKGLFNIIQVKTDVYFEIQDSLFKREFLIVNKLSQVPYDLNEAGLNKGMNYENKVIS CCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHH FYKDTIAKKVWVKTYQPKVSSPKDDAITASVINNFAESIIEVFDIETKNNDSSAVVIKVN HHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE KIFDGKQKSFNDVMGNIGLNGSVKSDLSYIEGLKSFPKNIVVKSQMTTSLSDGGATVPIT CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHEEEECHHHHCCCCCCCEEEEE LGVTTNIILLDKTPMKPRFSDKRIGFFTEKHWYFADAQQAMLEKELITRWRLEPKKEDEE ECCEEEEEEEECCCCCCCCCCCCCCEEEECCEEEHHHHHHHHHHHHHHHHCCCCCCCCHH RYMKGELVEPKKPIVYYIDPSTPKQWRKNIIDGVHDWQAAFEKAGFKNAVIAKEPTEEDL HHHCCCCCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCEEECCCCCCCC DFDIDDVRYSVITYAASPKSNAMGPSVVDPRSGEIIEADIIWWHNVMTSLQSWMRIQTGP CCCHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCC IDPKARGNKFSDEHMGEAIRFVSSHEVGHTFGLKHNMGASFAYDVESLRSKEFTAKMGGT CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHCHHHHHHCCCC APSIMDYARYNYVAQPEDNVTVITPKIGEYDKYAIEWGYRWYSPNENETAKLNALLTKHQ CHHHHHHHHCCCEECCCCCEEEECCCCCCCCCEEEEECEEEECCCCCCCHHHHHHHHHCC NDPIYFYGEQQSGVAIDPRSQSEDLGNDAVKASEYGLKNLKRVVDNIINWTYDKDQSYYE CCCEEEECCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH TGKLYVGTIGQWQTYNDHVLTNIGGVYLNTTVHGDNKQSYVPVPAAMQKRAADYLIKNVI CCCEEEEECCCCCCCCCCCEECCCCEEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHH TIPQWLFFNDILDKTNPLKDSPLGPYEYTPYTMARALQYEIMYSLLFDERLLRMTENELY HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRNKTNEKVFTVNDLFKKLHQSVFAGTIQNKSLTILERMTQKNYVDVLIISTNKLFEKTD HCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHCC AKKTIQLKETLQMPHLCSVDDEHTARNINNYFLKRVTEVTSDKKGELSKVLQLLKLKKST CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC GDQSTQNHYLDLIQRIEKALNNTTF CCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKEKAFLHNVKLFCLLILLLFIPVTVLAQKKKKKETESEIVKKDSTDAKKGKKYSDLIKK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHH GTVKKGLFNIIQVKTDVYFEIQDSLFKREFLIVNKLSQVPYDLNEAGLNKGMNYENKVIS CCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHH FYKDTIAKKVWVKTYQPKVSSPKDDAITASVINNFAESIIEVFDIETKNNDSSAVVIKVN HHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE KIFDGKQKSFNDVMGNIGLNGSVKSDLSYIEGLKSFPKNIVVKSQMTTSLSDGGATVPIT CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHEEEECHHHHCCCCCCCEEEEE LGVTTNIILLDKTPMKPRFSDKRIGFFTEKHWYFADAQQAMLEKELITRWRLEPKKEDEE ECCEEEEEEEECCCCCCCCCCCCCCEEEECCEEEHHHHHHHHHHHHHHHHCCCCCCCCHH RYMKGELVEPKKPIVYYIDPSTPKQWRKNIIDGVHDWQAAFEKAGFKNAVIAKEPTEEDL HHHCCCCCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCEEECCCCCCCC DFDIDDVRYSVITYAASPKSNAMGPSVVDPRSGEIIEADIIWWHNVMTSLQSWMRIQTGP CCCHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCC IDPKARGNKFSDEHMGEAIRFVSSHEVGHTFGLKHNMGASFAYDVESLRSKEFTAKMGGT CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHCHHHHHHCCCC APSIMDYARYNYVAQPEDNVTVITPKIGEYDKYAIEWGYRWYSPNENETAKLNALLTKHQ CHHHHHHHHCCCEECCCCCEEEECCCCCCCCCEEEEECEEEECCCCCCCHHHHHHHHHCC NDPIYFYGEQQSGVAIDPRSQSEDLGNDAVKASEYGLKNLKRVVDNIINWTYDKDQSYYE CCCEEEECCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH TGKLYVGTIGQWQTYNDHVLTNIGGVYLNTTVHGDNKQSYVPVPAAMQKRAADYLIKNVI CCCEEEEECCCCCCCCCCCEECCCCEEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHH TIPQWLFFNDILDKTNPLKDSPLGPYEYTPYTMARALQYEIMYSLLFDERLLRMTENELY HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRNKTNEKVFTVNDLFKKLHQSVFAGTIQNKSLTILERMTQKNYVDVLIISTNKLFEKTD HCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHCC AKKTIQLKETLQMPHLCSVDDEHTARNINNYFLKRVTEVTSDKKGELSKVLQLLKLKKST CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC GDQSTQNHYLDLIQRIEKALNNTTF CCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA