| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302386
Identifier: 146302386
GI number: 146302386
Start: 5635830
End: 5636603
Strand: Direct
Name: 146302386
Synonym: Fjoh_4659
Alternate gene names: NA
Gene position: 5635830-5636603 (Clockwise)
Preceding gene: 146302385
Following gene: 146302387
Centisome position: 92.44
GC content: 37.21
Gene sequence:
>774_bases ATGAAAAATTCGATCACACTTATTTTCGCTGCAATATTGTTTTCAACTACTATGAATGCACAACTGAAACCCGTAAAATA TTCTGAAGGAAGCCAGACTTTGAATGGTTTATTTATTAAATCGGCTAAAAAAAGCAATAATAATCCAGGAATTTTGCTTT TACCGGCATGGCTTGGAATTGACAATGCCTCTAAAGGAATTGCCGAAGATTTATCGAAACTGGGTTACCATGTTTTTATC GCTGATATTTATGGAGAAGGAAATTATCCAAAAAATACAGGTGAGGCTGGAAAACAAGCTGGTTTCTATAAAACAAATTA CGAAGCGTATCAAAAACGAATTAACGCCGCTTTGCAGGAATTAGTTAAATCTGGAGCAAATGCAGATAATATCGTGGCTA TTGGTTACTGTTTTGGAGGAACTGGAGTTCTTGAAGCAGCGCGCGGTCATTTAAACGTAAAAGGAATTGCTTCTTTTCAC GGAGGTTTAGGAAAAGATGCTGCGAGAAAAACAGAACCTATTACAGCCAAAGTTTTAATTTGTCACGGGGCTGATGATCC GTTTGTGCCAAAAGAAGAAATTACATCATTTCAGCAGGAAATGCGTGATTCTAAAGCTGACTGGCAGATGATTTATTATG CCAATTCAGTACACTCATTCACAAATCCCGAAGCTGGAAACGACAATTCTAAAGGCGCTGCTTATAACCCGGTTGCTGCC AAAAGATCTTTTGAACATTTACAGCTTTTTTTAAACGAAGTGCTTAAGAAATAA
Upstream 100 bases:
>100_bases TCAATTTCATTCAATTTTAAGAATATAAACCTCTCAAGAAATGGCTTGAGAGGTTTTTTTGTAACATTTTATTTCAGATA TTTGTTAAAAATTGTAAAAA
Downstream 100 bases:
>100_bases TACTTTTTTATAGCACGCAGATGACGCTTGATTATACAAATTTGTTTAACCCGTATAATCGGCGGCCAAAAATAACCAAA TCAAAACCAACTAAAATAAC
Product: dienelactone hydrolase
Products: 4-oxohex-2-enedioate
Alternate protein names: Dienelactone Hydrolase Family Protein; Carboxymethylenebutenolidase; Dienelactone Hydrolase Family; Hydrolase; Dienelactone Hydrolases; Dienelactone Hydrolase Protein; Dienelactone Hydrolase-Related; Transposase Remnant
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MKNSITLIFAAILFSTTMNAQLKPVKYSEGSQTLNGLFIKSAKKSNNNPGILLLPAWLGIDNASKGIAEDLSKLGYHVFI ADIYGEGNYPKNTGEAGKQAGFYKTNYEAYQKRINAALQELVKSGANADNIVAIGYCFGGTGVLEAARGHLNVKGIASFH GGLGKDAARKTEPITAKVLICHGADDPFVPKEEITSFQQEMRDSKADWQMIYYANSVHSFTNPEAGNDNSKGAAYNPVAA KRSFEHLQLFLNEVLKK
Sequences:
>Translated_257_residues MKNSITLIFAAILFSTTMNAQLKPVKYSEGSQTLNGLFIKSAKKSNNNPGILLLPAWLGIDNASKGIAEDLSKLGYHVFI ADIYGEGNYPKNTGEAGKQAGFYKTNYEAYQKRINAALQELVKSGANADNIVAIGYCFGGTGVLEAARGHLNVKGIASFH GGLGKDAARKTEPITAKVLICHGADDPFVPKEEITSFQQEMRDSKADWQMIYYANSVHSFTNPEAGNDNSKGAAYNPVAA KRSFEHLQLFLNEVLKK >Mature_257_residues MKNSITLIFAAILFSTTMNAQLKPVKYSEGSQTLNGLFIKSAKKSNNNPGILLLPAWLGIDNASKGIAEDLSKLGYHVFI ADIYGEGNYPKNTGEAGKQAGFYKTNYEAYQKRINAALQELVKSGANADNIVAIGYCFGGTGVLEAARGHLNVKGIASFH GGLGKDAARKTEPITAKVLICHGADDPFVPKEEITSFQQEMRDSKADWQMIYYANSVHSFTNPEAGNDNSKGAAYNPVAA KRSFEHLQLFLNEVLKK
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17532655, Length=239, Percent_Identity=36.4016736401674, Blast_Score=142, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17536419, Length=210, Percent_Identity=34.7619047619048, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI193204305, Length=208, Percent_Identity=30.2884615384615, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17532653, Length=225, Percent_Identity=30.6666666666667, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17536415, Length=128, Percent_Identity=38.28125, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17534829, Length=149, Percent_Identity=32.2147651006711, Blast_Score=71, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.1.45
Molecular weight: Translated: 27900; Mature: 27900
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSITLIFAAILFSTTMNAQLKPVKYSEGSQTLNGLFIKSAKKSNNNPGILLLPAWLGI CCCCHHHHHHHHHHHHCCCCEECCEEECCCCCHHHHHEEEECCCCCCCCCEEEEEEEECC DNASKGIAEDLSKLGYHVFIADIYGEGNYPKNTGEAGKQAGFYKTNYEAYQKRINAALQE CCCCHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHH LVKSGANADNIVAIGYCFGGTGVLEAARGHLNVKGIASFHGGLGKDAARKTEPITAKVLI HHHCCCCCCCEEEEEEEECCCHHHHHHCCCCCEEEHHHHCCCCCCCHHHCCCCCEEEEEE CHGADDPFVPKEEITSFQQEMRDSKADWQMIYYANSVHSFTNPEAGNDNSKGAAYNPVAA EECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHH KRSFEHLQLFLNEVLKK HHHHHHHHHHHHHHHCC >Mature Secondary Structure MKNSITLIFAAILFSTTMNAQLKPVKYSEGSQTLNGLFIKSAKKSNNNPGILLLPAWLGI CCCCHHHHHHHHHHHHCCCCEECCEEECCCCCHHHHHEEEECCCCCCCCCEEEEEEEECC DNASKGIAEDLSKLGYHVFIADIYGEGNYPKNTGEAGKQAGFYKTNYEAYQKRINAALQE CCCCHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHH LVKSGANADNIVAIGYCFGGTGVLEAARGHLNVKGIASFHGGLGKDAARKTEPITAKVLI HHHCCCCCCCEEEEEEEECCCHHHHHHCCCCCEEEHHHHCCCCCCCHHHCCCCCEEEEEE CHGADDPFVPKEEITSFQQEMRDSKADWQMIYYANSVHSFTNPEAGNDNSKGAAYNPVAA EECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHH KRSFEHLQLFLNEVLKK HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-carboxymethylenebut-2-en-4-olide; H2O
Specific reaction: 4-carboxymethylenebut-2-en-4-olide + H2O = 4-oxohex-2-enedioate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA