| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yeiH [C]
Identifier: 146302378
GI number: 146302378
Start: 5625177
End: 5626436
Strand: Direct
Name: yeiH [C]
Synonym: Fjoh_4651
Alternate gene names: 146302378
Gene position: 5625177-5626436 (Clockwise)
Preceding gene: 146302377
Following gene: 146302379
Centisome position: 92.26
GC content: 35.71
Gene sequence:
>1260_bases ATGTCAACTCAATCTAAAAAATTTAATATCCACGAAGACTGGACTGTTGTAATTCTGGGATTTATAATCATTGGGATTTC ACTTTTTATATTTCTTCCCGAAGTTCCCGTTTTTAACTGGTCAAACCCTGCCGATTTACAAGCAAAAGTATTCGATCTTC AAAACCTTGAAATTCTTTTTATTCAATTTATATATTTTATTTCCATTGGTACGCTGGGTACTTTTTTGATTGGAAGACCT GTAAGATATTTTCTATTTACTTTTCCTGTAGTATATATCTTAACATTAATTGCCCTTATTCTGGCTGGAAATGCAGCCAT AAAATCGATTAATCTCGAAGCTGTAATTTTTAGTTTGATAATTGGTTTGGCTATTGGCAACTTTTTCAAACTTCCGGAAT GGTTTCGCTCTGCACTTTCTACAGAAGTTTTTGTAAAAATTGGACTGGTTTTATTGGGAACCAGTGTTATTTTTTCAGAT ATTTTAAAGGCAGGATCATTAGGCTTAATACAGGCATTGGTTGTTGTTATATCTGTCTGGTGTTTTGCCTTTTGGCTTTG CCGAAAATTAAAAGTCGACGATGAACTCACAATGATGATTTCGAGTGCCGTTTCTATCTGCGGTGTTTCTGCTGCAATTG CAACATCGGGCGCAATAAAAGGCGATTCTAAAAAATTATCATACGTTATTTCAATTGTTTTGGTAACCGCAATTCCCATG ATGATTTTCATGCCTATTATTGCCAGATATTTCAATTTTCCCGAAGAAGTAACCGGAGCATGGCTTGGCGGCAGTATCGA CACATCTGGAGCTGTTGTGGCTTCGGGAACTTTGGTTGGCGAAACGGCTTTAAAAATCAGTACAATTGTAAAATTCTCTC AAAACGTTTTACTCGGATTAGCTGCTTTTGCCATTTCGGTTTATTGGACGTATTCGCATAATACAACATCGGAAGCTGTC GAATCCAAACCAACTTTAAAAGTAATCTGGGAGCGTTTCCCAAAATTCGTAATCGGATTTATCGCTGCTTCTCTGCTCTT TTCATTTCTAATTACACCAGAAACCAGAAACAACGTAAAAGACAGTTTAAAAAACCTTCAGGGAATTTGGTTTGCACTGG CTTTTACAAGCATAGGTTTAGAAACCAATTTTAAGGATTTATTGAGCAATAACAGCCGTATACCATTATATGCTTTTTTA ATTGCACAGTTATTCAATGTGATTGTTACATTGATTGTTGCGTTTTTGCTTTTTGGGTAA
Upstream 100 bases:
>100_bases AGCCTTTTCTGTTTGCAAATTGGTTACCTCCAGCTGAAGCTCGAGGCAATTGAAATAAAATCTTAGAATCGATAATTCTT AGAATAATCAAATCAAAAAT
Downstream 100 bases:
>100_bases TAGTTGAACCGCAAAGGGCGCTAAGTTTTACGCTAAGCACGCTAAGTCATTGCGAGGAACGAAGCAGTCACATTAACAAT TAGCTGCAAAGCTTGATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MSTQSKKFNIHEDWTVVILGFIIIGISLFIFLPEVPVFNWSNPADLQAKVFDLQNLEILFIQFIYFISIGTLGTFLIGRP VRYFLFTFPVVYILTLIALILAGNAAIKSINLEAVIFSLIIGLAIGNFFKLPEWFRSALSTEVFVKIGLVLLGTSVIFSD ILKAGSLGLIQALVVVISVWCFAFWLCRKLKVDDELTMMISSAVSICGVSAAIATSGAIKGDSKKLSYVISIVLVTAIPM MIFMPIIARYFNFPEEVTGAWLGGSIDTSGAVVASGTLVGETALKISTIVKFSQNVLLGLAAFAISVYWTYSHNTTSEAV ESKPTLKVIWERFPKFVIGFIAASLLFSFLITPETRNNVKDSLKNLQGIWFALAFTSIGLETNFKDLLSNNSRIPLYAFL IAQLFNVIVTLIVAFLLFG
Sequences:
>Translated_419_residues MSTQSKKFNIHEDWTVVILGFIIIGISLFIFLPEVPVFNWSNPADLQAKVFDLQNLEILFIQFIYFISIGTLGTFLIGRP VRYFLFTFPVVYILTLIALILAGNAAIKSINLEAVIFSLIIGLAIGNFFKLPEWFRSALSTEVFVKIGLVLLGTSVIFSD ILKAGSLGLIQALVVVISVWCFAFWLCRKLKVDDELTMMISSAVSICGVSAAIATSGAIKGDSKKLSYVISIVLVTAIPM MIFMPIIARYFNFPEEVTGAWLGGSIDTSGAVVASGTLVGETALKISTIVKFSQNVLLGLAAFAISVYWTYSHNTTSEAV ESKPTLKVIWERFPKFVIGFIAASLLFSFLITPETRNNVKDSLKNLQGIWFALAFTSIGLETNFKDLLSNNSRIPLYAFL IAQLFNVIVTLIVAFLLFG >Mature_418_residues STQSKKFNIHEDWTVVILGFIIIGISLFIFLPEVPVFNWSNPADLQAKVFDLQNLEILFIQFIYFISIGTLGTFLIGRPV RYFLFTFPVVYILTLIALILAGNAAIKSINLEAVIFSLIIGLAIGNFFKLPEWFRSALSTEVFVKIGLVLLGTSVIFSDI LKAGSLGLIQALVVVISVWCFAFWLCRKLKVDDELTMMISSAVSICGVSAAIATSGAIKGDSKKLSYVISIVLVTAIPMM IFMPIIARYFNFPEEVTGAWLGGSIDTSGAVVASGTLVGETALKISTIVKFSQNVLLGLAAFAISVYWTYSHNTTSEAVE SKPTLKVIWERFPKFVIGFIAASLLFSFLITPETRNNVKDSLKNLQGIWFALAFTSIGLETNFKDLLSNNSRIPLYAFLI AQLFNVIVTLIVAFLLFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=339, Percent_Identity=23.3038348082596, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 46090; Mature: 45959
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQSKKFNIHEDWTVVILGFIIIGISLFIFLPEVPVFNWSNPADLQAKVFDLQNLEILF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHHH IQFIYFISIGTLGTFLIGRPVRYFLFTFPVVYILTLIALILAGNAAIKSINLEAVIFSLI HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHH IGLAIGNFFKLPEWFRSALSTEVFVKIGLVLLGTSVIFSDILKAGSLGLIQALVVVISVW HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH CFAFWLCRKLKVDDELTMMISSAVSICGVSAAIATSGAIKGDSKKLSYVISIVLVTAIPM HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH MIFMPIIARYFNFPEEVTGAWLGGSIDTSGAVVASGTLVGETALKISTIVKFSQNVLLGL HHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH AAFAISVYWTYSHNTTSEAVESKPTLKVIWERFPKFVIGFIAASLLFSFLITPETRNNVK HHHHHHHEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH DSLKNLQGIWFALAFTSIGLETNFKDLLSNNSRIPLYAFLIAQLFNVIVTLIVAFLLFG HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STQSKKFNIHEDWTVVILGFIIIGISLFIFLPEVPVFNWSNPADLQAKVFDLQNLEILF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHHH IQFIYFISIGTLGTFLIGRPVRYFLFTFPVVYILTLIALILAGNAAIKSINLEAVIFSLI HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHH IGLAIGNFFKLPEWFRSALSTEVFVKIGLVLLGTSVIFSDILKAGSLGLIQALVVVISVW HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH CFAFWLCRKLKVDDELTMMISSAVSICGVSAAIATSGAIKGDSKKLSYVISIVLVTAIPM HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH MIFMPIIARYFNFPEEVTGAWLGGSIDTSGAVVASGTLVGETALKISTIVKFSQNVLLGL HHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH AAFAISVYWTYSHNTTSEAVESKPTLKVIWERFPKFVIGFIAASLLFSFLITPETRNNVK HHHHHHHEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH DSLKNLQGIWFALAFTSIGLETNFKDLLSNNSRIPLYAFLIAQLFNVIVTLIVAFLLFG HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12835416 [H]