| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302362
Identifier: 146302362
GI number: 146302362
Start: 5605377
End: 5605997
Strand: Direct
Name: 146302362
Synonym: Fjoh_4635
Alternate gene names: NA
Gene position: 5605377-5605997 (Clockwise)
Preceding gene: 146302361
Following gene: 146302372
Centisome position: 91.94
GC content: 36.23
Gene sequence:
>621_bases ATGGAAAACAAACCCGAAGAAATTACTCCTGAGAAAACTGATTCTCCAGCTGCAGAAAATGTAAAACCTGCCGCAGAAGA AACAAAAACTGCACCAGCTGCACCAGCTAAAACAACTGCTGCCAAAGCAGCTCCAGCTAAAACGACAACGGCAGCAAAAC CAGCCGCTGCAAAATCTACTGCAACAAAAGCACCTGCTAAACCAGCAGCAAAAACAACTGCTCCTGCTGCAACGGTAAAA ACAGCAGTACGCAGAACACCTGCAAAAAAAGTTACTGCACCTGTGGTTAAACCTGCAGTTATAGAACCAATAACTGAAAT TAAAGAAGAAAACGCAGCAAAAAATACTTCAACTGAAGAAACAGCTGAAGATAAATCTAACAATAAAAAAGCTAAAAAGG TGAAAGACAAAGAAAAGGAAAAAGAGAAAAAGAAAGCTGCAAAGAAAAAAGATAAGGCTAAAAAAGATAAAAAGAAGGAG AAAGCTAAAAAAGCAAAATTAAAAGCGGCCGCTAAGAAAAAAGAAAAAGCTAAAAAAGCAAAAGATAAAGCGAAAGCTAA AAAAATTGCAAAAAAGAAAGCAAAGTCTAAAAAAAAGGCAAAAGCTAAAAAGAAAAAATAA
Upstream 100 bases:
>100_bases CTTAACATTAGAAAGCTTGTTTTATAATTATCTTTACTTAACCAAAAATTAACAATTTGGTTACATTGCTATTAATACAC TCATTTAAAGCACTTAATAT
Downstream 100 bases:
>100_bases TATATAAAAAAAGCTCAACTTAAAGTTGAGCTTTTTTTATTTAATAATTAATAATTCATAATTCATAATTAATAATTAAT AATTAATAATTAACTTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MENKPEEITPEKTDSPAAENVKPAAEETKTAPAAPAKTTAAKAAPAKTTTAAKPAAAKSTATKAPAKPAAKTTAPAATVK TAVRRTPAKKVTAPVVKPAVIEPITEIKEENAAKNTSTEETAEDKSNNKKAKKVKDKEKEKEKKKAAKKKDKAKKDKKKE KAKKAKLKAAAKKKEKAKKAKDKAKAKKIAKKKAKSKKKAKAKKKK
Sequences:
>Translated_206_residues MENKPEEITPEKTDSPAAENVKPAAEETKTAPAAPAKTTAAKAAPAKTTTAAKPAAAKSTATKAPAKPAAKTTAPAATVK TAVRRTPAKKVTAPVVKPAVIEPITEIKEENAAKNTSTEETAEDKSNNKKAKKVKDKEKEKEKKKAAKKKDKAKKDKKKE KAKKAKLKAAAKKKEKAKKAKDKAKAKKIAKKKAKSKKKAKAKKKK >Mature_206_residues MENKPEEITPEKTDSPAAENVKPAAEETKTAPAAPAKTTAAKAAPAKTTTAAKPAAAKSTATKAPAKPAAKTTAPAATVK TAVRRTPAKKVTAPVVKPAVIEPITEIKEENAAKNTSTEETAEDKSNNKKAKKVKDKEKEKEKKKAAKKKDKAKKDKKKE KAKKAKLKAAAKKKEKAKKAKDKAKAKKIAKKKAKSKKKAKAKKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21919; Mature: 21919
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKPEEITPEKTDSPAAENVKPAAEETKTAPAAPAKTTAAKAAPAKTTTAAKPAAAKST CCCCCCCCCCCCCCCCCHHCCCCHHHHHCCCCCCCCHHHHHHCCCCCCHHCCCCHHHHHH ATKAPAKPAAKTTAPAATVKTAVRRTPAKKVTAPVVKPAVIEPITEIKEENAAKNTSTEE HHCCCCCCCHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH TAEDKSNNKKAKKVKDKEKEKEKKKAAKKKDKAKKDKKKEKAKKAKLKAAAKKKEKAKKA HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDKAKAKKIAKKKAKSKKKAKAKKKK HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MENKPEEITPEKTDSPAAENVKPAAEETKTAPAAPAKTTAAKAAPAKTTTAAKPAAAKST CCCCCCCCCCCCCCCCCHHCCCCHHHHHCCCCCCCCHHHHHHCCCCCCHHCCCCHHHHHH ATKAPAKPAAKTTAPAATVKTAVRRTPAKKVTAPVVKPAVIEPITEIKEENAAKNTSTEE HHCCCCCCCHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH TAEDKSNNKKAKKVKDKEKEKEKKKAAKKKDKAKKDKKKEKAKKAKLKAAAKKKEKAKKA HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDKAKAKKIAKKKAKSKKKAKAKKKK HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA