| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302350
Identifier: 146302350
GI number: 146302350
Start: 5587065
End: 5587838
Strand: Reverse
Name: 146302350
Synonym: Fjoh_4623
Alternate gene names: NA
Gene position: 5587838-5587065 (Counterclockwise)
Preceding gene: 146302359
Following gene: 146302347
Centisome position: 91.65
GC content: 33.33
Gene sequence:
>774_bases ATGAAAAAAGTACTCTCAATATTGTTGTTATCATTTTTAATGATAGGCTGTAAAACGACAGCAAATAAAGAAACTGCAGG AACAGATTCAACAAGTTCGACAGAAGAAGATTTAAAATATTATTTTAAAGGAACAGGAAACGAACCGTTTTGGGGAATCA AAATGGGGAATGACGAAATTGTCTTTACATCATTAATACCAGGAAAAGAAAAAATAACTTTTCCTGCCGTTGATGCGATT AAAGCTATGGATGCCAATGTGAAAATGTATAAAGTAAGTAATGAAACGACTTCGGCAACAATTACAATCCAACAGCTGGA TTGTCAGGATTCAATGTCTGGTGCAATTTCACCTTACAGCGTAAAAGTTGAAATTAAAAACAATTCTGAATTAGAAGCAA AAAAACTAAGCGGATGCGGAAAATATCTTACTGATTACCGACTTCATGATATTTGGGTTTTGGAAGAATTGAATGGATAT AAAGTCTTTGCCACTGATTTTCAAAAGGAAATGCCTCGAATTGAAATTAATTCAACTGAAAATAGATTTTCTGGCTATGG CGGCTGTAATGCCATTAGTGGTTCTATTTTTTATGAAAAGGATTTGCTGAGATTTACCAAAGTAATATCGACTCTAATGG CTTGCCCACAAGGAAATAAAGAAGGTGAATTTACAAAAGCATTGCAAAGCACAACAACTTATTCTATTGGAAATAATCAA TTGACTTTGTCTAATCCTTCTGGGAAACTTTTGGTTTTTAAGAAGGTGGATTAG
Upstream 100 bases:
>100_bases ATTTGAAAGGATTCTAAATAGGCGTTTCAAAAAAATGTCGTAAATTCATAAGAATTTTATAGGTGTTTTACTAAAAAGAA CATTTTTAATCTAAGATCTC
Downstream 100 bases:
>100_bases TTTTATAAGGGCTTCGACTTCGCTCAGCCTGACATTTCGTTTGTCTTCCTGAGCGAAGTCGAAGGATTTATTCTAGTTCC TTAGTTTCTTCCTCTTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MKKVLSILLLSFLMIGCKTTANKETAGTDSTSSTEEDLKYYFKGTGNEPFWGIKMGNDEIVFTSLIPGKEKITFPAVDAI KAMDANVKMYKVSNETTSATITIQQLDCQDSMSGAISPYSVKVEIKNNSELEAKKLSGCGKYLTDYRLHDIWVLEELNGY KVFATDFQKEMPRIEINSTENRFSGYGGCNAISGSIFYEKDLLRFTKVISTLMACPQGNKEGEFTKALQSTTTYSIGNNQ LTLSNPSGKLLVFKKVD
Sequences:
>Translated_257_residues MKKVLSILLLSFLMIGCKTTANKETAGTDSTSSTEEDLKYYFKGTGNEPFWGIKMGNDEIVFTSLIPGKEKITFPAVDAI KAMDANVKMYKVSNETTSATITIQQLDCQDSMSGAISPYSVKVEIKNNSELEAKKLSGCGKYLTDYRLHDIWVLEELNGY KVFATDFQKEMPRIEINSTENRFSGYGGCNAISGSIFYEKDLLRFTKVISTLMACPQGNKEGEFTKALQSTTTYSIGNNQ LTLSNPSGKLLVFKKVD >Mature_257_residues MKKVLSILLLSFLMIGCKTTANKETAGTDSTSSTEEDLKYYFKGTGNEPFWGIKMGNDEIVFTSLIPGKEKITFPAVDAI KAMDANVKMYKVSNETTSATITIQQLDCQDSMSGAISPYSVKVEIKNNSELEAKKLSGCGKYLTDYRLHDIWVLEELNGY KVFATDFQKEMPRIEINSTENRFSGYGGCNAISGSIFYEKDLLRFTKVISTLMACPQGNKEGEFTKALQSTTTYSIGNNQ LTLSNPSGKLLVFKKVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28494; Mature: 28494
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLSILLLSFLMIGCKTTANKETAGTDSTSSTEEDLKYYFKGTGNEPFWGIKMGNDEI CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHEEEECCCCCCEEEEEECCCCE VFTSLIPGKEKITFPAVDAIKAMDANVKMYKVSNETTSATITIQQLDCQDSMSGAISPYS EEEEECCCCCEEECCHHHHHHHCCCCEEEEEECCCCCEEEEEEEEECCCHHHCCCCCCEE VKVEIKNNSELEAKKLSGCGKYLTDYRLHDIWVLEELNGYKVFATDFQKEMPRIEINSTE EEEEECCCCCCHHHHHHCCHHHHHCCEEEEEEEEECCCCEEEEEECHHHHCCEEEECCCC NRFSGYGGCNAISGSIFYEKDLLRFTKVISTLMACPQGNKEGEFTKALQSTTTYSIGNNQ CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCEEEEECCCE LTLSNPSGKLLVFKKVD EEEECCCCCEEEEEECC >Mature Secondary Structure MKKVLSILLLSFLMIGCKTTANKETAGTDSTSSTEEDLKYYFKGTGNEPFWGIKMGNDEI CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHEEEECCCCCCEEEEEECCCCE VFTSLIPGKEKITFPAVDAIKAMDANVKMYKVSNETTSATITIQQLDCQDSMSGAISPYS EEEEECCCCCEEECCHHHHHHHCCCCEEEEEECCCCCEEEEEEEEECCCHHHCCCCCCEE VKVEIKNNSELEAKKLSGCGKYLTDYRLHDIWVLEELNGYKVFATDFQKEMPRIEINSTE EEEEECCCCCCHHHHHHCCHHHHHCCEEEEEEEEECCCCEEEEEECHHHHCCEEEECCCC NRFSGYGGCNAISGSIFYEKDLLRFTKVISTLMACPQGNKEGEFTKALQSTTTYSIGNNQ CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCEEEEECCCE LTLSNPSGKLLVFKKVD EEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA