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The map label for this gene is ypjH [H]

Identifier: 146302307

GI number: 146302307

Start: 5538948

End: 5540084

Strand: Reverse

Name: ypjH [H]

Synonym: Fjoh_4580

Alternate gene names: 146302307

Gene position: 5540084-5538948 (Counterclockwise)

Preceding gene: 146302308

Following gene: 146302306

Centisome position: 90.87

GC content: 34.92

Gene sequence:

>1137_bases
ATGAAAATAGCAATAGTTTGTTATCCAACATTTGGCGGTAGTGGTGTAGTAGCCACTGAGTTAGGTCTCGAATTAGCCAG
ACGCGGACACGAAATACACTTTATAACTTACAGCCAGCCGGTAAGATTGGCACTTTTAAATCCTAATGTTCATTATCACG
AAGTAAACGTTCCAGAATATCCTTTATTTCATTATCAGCCGTATGAATTAGCTTTGTCAAGCAAATTGGTCGACATGGTG
AAATTATATAAAATAGAAGTTCTTCATGTACATTATGCAATTCCTCATGCGTATGCAGGATATATGGCAAAACAAATGCT
GAAGAATGAGGGAATTAATCTTCCAATGATTACAACACTTCACGGAACTGATATTACGCTGGTAGGGAATCATCCGTTTT
ACAAACCTGCGGTGACTTTCAGTATCAATAAATCAGATTATGTGACTTCGGTTTCACAGAGTTTGAAAGATGATACTTTG
AAATTATTCAAGATCAAAAATAAAATTAAGGTAATCCCGAATTTTATTGAATTGGATAAAGTTAGAAAAGACCCAACTGA
GCCTTGTCACAGATATGTAATGGCAAAGGAGAATGAAAGAATCGTAACACATATCAGTAACTTTAGAAAAGTAAAACGCA
TTCCGGATATTATTAAGATTTTCTATAATATCCAGAAAGAAATGCCGGCTAAATTAATGATGGTGGGCGATGGTCCTGAA
AAGGAAAAAGCAGAGGTTTTGTGTATGGAACTAGGAATTCACGATAAAGTAATTTTCTTTGGTAACAGTAATGAGATCGA
CAAGATTTTATGCATGACCGATTTGTTTTTACTTCCATCAGAAACAGAAAGTTTCGGGTTAGCAGCTTTAGAAGCTATGG
CTTGCGGTGTTCCGGTTATTTCGAGTAATTCAGGAGGATTGCCTGAGGTTAATTTTGATGGTGTTTCCGGATATTTGAGT
GATGTTGGAAATGTTGATGAAATGGCAGCCAATGCTATTAAGATATTAAAAGATGACAAAACACTGAATGAGTTTAAAGC
AAATGCTTTAGAAGTTGCGAAGAATTTTGATATTAAAAACATTCTTCCAAAATATGAAGCTTTGTATCAAAGAGCAATTG
ACGATTATAAAGAATAA

Upstream 100 bases:

>100_bases
TTTATTAACTGGAATTAATCTAATTTTGTCGAAAATCTAACAATTTAAACAGCCCATTCAACGCTATTTTTGAGTATTTT
CGTAGAATTAAATTTAATAC

Downstream 100 bases:

>100_bases
AAACAATAATTTAAAAATTTGAACGTAATGAAAAAAGTAATTTCGGTTTTAGTAATTTTTGTTTTGGTTTCCTGCGGTGC
ATCAAAAACAGCTGCTTCAT

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MKIAIVCYPTFGGSGVVATELGLELARRGHEIHFITYSQPVRLALLNPNVHYHEVNVPEYPLFHYQPYELALSSKLVDMV
KLYKIEVLHVHYAIPHAYAGYMAKQMLKNEGINLPMITTLHGTDITLVGNHPFYKPAVTFSINKSDYVTSVSQSLKDDTL
KLFKIKNKIKVIPNFIELDKVRKDPTEPCHRYVMAKENERIVTHISNFRKVKRIPDIIKIFYNIQKEMPAKLMMVGDGPE
KEKAEVLCMELGIHDKVIFFGNSNEIDKILCMTDLFLLPSETESFGLAALEAMACGVPVISSNSGGLPEVNFDGVSGYLS
DVGNVDEMAANAIKILKDDKTLNEFKANALEVAKNFDIKNILPKYEALYQRAIDDYKE

Sequences:

>Translated_378_residues
MKIAIVCYPTFGGSGVVATELGLELARRGHEIHFITYSQPVRLALLNPNVHYHEVNVPEYPLFHYQPYELALSSKLVDMV
KLYKIEVLHVHYAIPHAYAGYMAKQMLKNEGINLPMITTLHGTDITLVGNHPFYKPAVTFSINKSDYVTSVSQSLKDDTL
KLFKIKNKIKVIPNFIELDKVRKDPTEPCHRYVMAKENERIVTHISNFRKVKRIPDIIKIFYNIQKEMPAKLMMVGDGPE
KEKAEVLCMELGIHDKVIFFGNSNEIDKILCMTDLFLLPSETESFGLAALEAMACGVPVISSNSGGLPEVNFDGVSGYLS
DVGNVDEMAANAIKILKDDKTLNEFKANALEVAKNFDIKNILPKYEALYQRAIDDYKE
>Mature_378_residues
MKIAIVCYPTFGGSGVVATELGLELARRGHEIHFITYSQPVRLALLNPNVHYHEVNVPEYPLFHYQPYELALSSKLVDMV
KLYKIEVLHVHYAIPHAYAGYMAKQMLKNEGINLPMITTLHGTDITLVGNHPFYKPAVTFSINKSDYVTSVSQSLKDDTL
KLFKIKNKIKVIPNFIELDKVRKDPTEPCHRYVMAKENERIVTHISNFRKVKRIPDIIKIFYNIQKEMPAKLMMVGDGPE
KEKAEVLCMELGIHDKVIFFGNSNEIDKILCMTDLFLLPSETESFGLAALEAMACGVPVISSNSGGLPEVNFDGVSGYLS
DVGNVDEMAANAIKILKDDKTLNEFKANALEVAKNFDIKNILPKYEALYQRAIDDYKE

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI11863130, Length=385, Percent_Identity=21.038961038961, Blast_Score=65, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI9755344, Length=388, Percent_Identity=20.1030927835052, Blast_Score=70, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 42645; Mature: 42645

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAIVCYPTFGGSGVVATELGLELARRGHEIHFITYSQPVRLALLNPNVHYHEVNVPEY
CEEEEEEEECCCCCCEEHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCEEEEECCCCCC
PLFHYQPYELALSSKLVDMVKLYKIEVLHVHYAIPHAYAGYMAKQMLKNEGINLPMITTL
CCEECCCHHHHHHHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEE
HGTDITLVGNHPFYKPAVTFSINKSDYVTSVSQSLKDDTLKLFKIKNKIKVIPNFIELDK
CCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHEEEEEECCHHEECCCHHHHHH
VRKDPTEPCHRYVMAKENERIVTHISNFRKVKRIPDIIKIFYNIQKEMPAKLMMVGDGPE
HCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
KEKAEVLCMELGIHDKVIFFGNSNEIDKILCMTDLFLLPSETESFGLAALEAMACGVPVI
CHHHHEEEEEECCCCEEEEECCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCCEE
SSNSGGLPEVNFDGVSGYLSDVGNVDEMAANAIKILKDDKTLNEFKANALEVAKNFDIKN
ECCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH
ILPKYEALYQRAIDDYKE
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIAIVCYPTFGGSGVVATELGLELARRGHEIHFITYSQPVRLALLNPNVHYHEVNVPEY
CEEEEEEEECCCCCCEEHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCEEEEECCCCCC
PLFHYQPYELALSSKLVDMVKLYKIEVLHVHYAIPHAYAGYMAKQMLKNEGINLPMITTL
CCEECCCHHHHHHHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEE
HGTDITLVGNHPFYKPAVTFSINKSDYVTSVSQSLKDDTLKLFKIKNKIKVIPNFIELDK
CCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHEEEEEECCHHEECCCHHHHHH
VRKDPTEPCHRYVMAKENERIVTHISNFRKVKRIPDIIKIFYNIQKEMPAKLMMVGDGPE
HCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
KEKAEVLCMELGIHDKVIFFGNSNEIDKILCMTDLFLLPSETESFGLAALEAMACGVPVI
CHHHHEEEEEECCCCEEEEECCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCCEE
SSNSGGLPEVNFDGVSGYLSDVGNVDEMAANAIKILKDDKTLNEFKANALEVAKNFDIKN
ECCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH
ILPKYEALYQRAIDDYKE
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]