| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302293
Identifier: 146302293
GI number: 146302293
Start: 5523229
End: 5523723
Strand: Reverse
Name: 146302293
Synonym: Fjoh_4566
Alternate gene names: NA
Gene position: 5523723-5523229 (Counterclockwise)
Preceding gene: 146302294
Following gene: 146302289
Centisome position: 90.6
GC content: 34.14
Gene sequence:
>495_bases ATGAAAGTAATATTGATTGTTTTGTGTTTTTTTACGGCTGGTTTTTCTATAAATGCCCAAGCGAAGGTGATTACTTCTGT CAATGAAGCCGGCGACGTGGCAACTTATGAATTAGATAGTTCTGTTAAGTTTCAAAGTCTGGCAAAAGGACTTCGGTATA ATATAACGAGACATGAGTTTAAAGGGCCTGAAATGAAGAACTCCTATAGACTGCTTTTGGTTATGGATGGTTTTTATTCG AAAACTTTAAATAAGGAAATGACAATTTCTGCAGTTTTAAGTGATGGTACTGTTTTAGAAGCCAGAAAGATTATTGAAGA TGATGGTTTTTTTGACGGAGCGTGTACTTTAAAAATAAAAGATCCAGAAGCACTTTTAAAAGCGAATATAGACAAAGTTA TTGTTCATGCAGGTAAAGATGTGGTTTACCCGATTTCGGCTCAGAATAAAGCCATTTTCAAAAAGAATCTGAGTAATGTT ATTAACGCTAAGTAA
Upstream 100 bases:
>100_bases AAACAAGTAATCCTTAGATAGTTATAAAATTAAAATCGCCTTTTTTCTAACGAGAAAAGGCGATTTTTTTTACTTTTATA TAAATCTTAAATAATTGAAT
Downstream 100 bases:
>100_bases AAGGGCCAAAGGTTTAGAGGGACAAAGGTTCAAAGGTTTTTCTTTATGAATAAAAAAATCCAAATTCCTGTTTACGGGAA TTTGGATTTTTTTATATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKVILIVLCFFTAGFSINAQAKVITSVNEAGDVATYELDSSVKFQSLAKGLRYNITRHEFKGPEMKNSYRLLLVMDGFYS KTLNKEMTISAVLSDGTVLEARKIIEDDGFFDGACTLKIKDPEALLKANIDKVIVHAGKDVVYPISAQNKAIFKKNLSNV INAK
Sequences:
>Translated_164_residues MKVILIVLCFFTAGFSINAQAKVITSVNEAGDVATYELDSSVKFQSLAKGLRYNITRHEFKGPEMKNSYRLLLVMDGFYS KTLNKEMTISAVLSDGTVLEARKIIEDDGFFDGACTLKIKDPEALLKANIDKVIVHAGKDVVYPISAQNKAIFKKNLSNV INAK >Mature_164_residues MKVILIVLCFFTAGFSINAQAKVITSVNEAGDVATYELDSSVKFQSLAKGLRYNITRHEFKGPEMKNSYRLLLVMDGFYS KTLNKEMTISAVLSDGTVLEARKIIEDDGFFDGACTLKIKDPEALLKANIDKVIVHAGKDVVYPISAQNKAIFKKNLSNV INAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18112; Mature: 18112
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVILIVLCFFTAGFSINAQAKVITSVNEAGDVATYELDSSVKFQSLAKGLRYNITRHEF CHHHHEEHHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHCC KGPEMKNSYRLLLVMDGFYSKTLNKEMTISAVLSDGTVLEARKIIEDDGFFDGACTLKIK CCCCCCCCEEEEEEECCCHHHHCCCCEEEEEEECCCCEEHHHHHHCCCCCCCCEEEEEEC DPEALLKANIDKVIVHAGKDVVYPISAQNKAIFKKNLSNVINAK CHHHHHHCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKVILIVLCFFTAGFSINAQAKVITSVNEAGDVATYELDSSVKFQSLAKGLRYNITRHEF CHHHHEEHHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHCC KGPEMKNSYRLLLVMDGFYSKTLNKEMTISAVLSDGTVLEARKIIEDDGFFDGACTLKIK CCCCCCCCEEEEEEECCCHHHHCCCCEEEEEEECCCCEEHHHHHHCCCCCCCCEEEEEEC DPEALLKANIDKVIVHAGKDVVYPISAQNKAIFKKNLSNVINAK CHHHHHHCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA