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The map label for this gene is 146302287

Identifier: 146302287

GI number: 146302287

Start: 5513642

End: 5514664

Strand: Reverse

Name: 146302287

Synonym: Fjoh_4560

Alternate gene names: NA

Gene position: 5514664-5513642 (Counterclockwise)

Preceding gene: 146302288

Following gene: 146302286

Centisome position: 90.45

GC content: 34.9

Gene sequence:

>1023_bases
ATGATAAAAAATAAAGCCTTATTAGGCATCCTTTTTTTCATGAGTTCTCTTTTTTCTGTGTACAGTTGTACCAGTGAAAA
AGAAAATAATCCGGAAGAAGTAAAAAGTAAAAAAGCAAGAGTAGTGGGGTACTTATCTGCCGACAGCTTTGATAAAATAA
CATCAATTGAATTTTGTAAGCTGACGCATTTAAATATTGCTTTTGCTAATCCTGATAAAAATGGGAATCTAGTTTTTGAC
GGAGATATTGATGCCGTAACCAAATATGTAAGATCTGTAAATTCAAATATTGTCATAAGCATTTCACTTGCCGGCGGAGT
CATTTCAACCGAACAAGCAGCAAATTGGTCTTTACTAATTGATAAACCCGAAAACCGGCCGGCTTTTATGCAAAATATTT
CAAAGTTTGTCACAGATCATAATTTAGATGGTGTAGATGTTGATCTCGAATGGGATGCAGTTACATCTGGTTACAGCGGT
TTTGTAGTTGAGTTAAGAAAAGAACTTACGGATCGTAAAAAACTGCTCACAGCGGCACTTCCTAATAATACCCGATTTGT
AAATATAAATTCTGAAGCATTAAATGCTTTCGATTTTATAAATATTATGGCCTACGATAGTACTGGACCATGGAGTCCGA
ATAAAATAGAACAGCACAGTTCGTTTGAATTTGCCAAAGAAGGAGTTGAATTTTGGAAGAAACAAAATGTGCCCAGTGAA
AAGCTGACACTTGGAGTTCCTTTTTATGGGTATAACTTTACTTATCCTGAAGTAACCAGTTCTACTTTTGGAGAAATAAT
ACAAGCAGGAACGCAATTTGCGGATCAGGATGAAATTGGTAAAATTTATTATAACGGAAGGCCGACAATTTTGAAAAAAG
TAGAATATGCATCGCAAAATACAGGCGGCATTATGATATGGGAACTGGCTCAGGATTCTTTTGGAGAATATTCTCTATTA
GAAGTCATCCATAAAAAATATACAGATCTAAAATACAAGACTTCAGGCATGTGCGGTAATTAA

Upstream 100 bases:

>100_bases
TGGGATGTAAACTAAAAAAATCCTAAAATATAGTTATGCCTGATAAGGTATTATTTCAATCTAATTAAAATTAAGAACAC
TAAAGTTTAAATTCAAAATT

Downstream 100 bases:

>100_bases
TTTTATTTCCTACACGATTTTTTAATTAATAAGTTTTTCGCTTCTTTTTATTCGTAAAGATTAAAAAGAAGCGTTATTTT
TTATATAAATATCAGATTTA

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Glycoside Hydrolase Family Protein; Chitinase C; Glycosyl Hydrolase; Glycoside Hydrolase

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MIKNKALLGILFFMSSLFSVYSCTSEKENNPEEVKSKKARVVGYLSADSFDKITSIEFCKLTHLNIAFANPDKNGNLVFD
GDIDAVTKYVRSVNSNIVISISLAGGVISTEQAANWSLLIDKPENRPAFMQNISKFVTDHNLDGVDVDLEWDAVTSGYSG
FVVELRKELTDRKKLLTAALPNNTRFVNINSEALNAFDFINIMAYDSTGPWSPNKIEQHSSFEFAKEGVEFWKKQNVPSE
KLTLGVPFYGYNFTYPEVTSSTFGEIIQAGTQFADQDEIGKIYYNGRPTILKKVEYASQNTGGIMIWELAQDSFGEYSLL
EVIHKKYTDLKYKTSGMCGN

Sequences:

>Translated_340_residues
MIKNKALLGILFFMSSLFSVYSCTSEKENNPEEVKSKKARVVGYLSADSFDKITSIEFCKLTHLNIAFANPDKNGNLVFD
GDIDAVTKYVRSVNSNIVISISLAGGVISTEQAANWSLLIDKPENRPAFMQNISKFVTDHNLDGVDVDLEWDAVTSGYSG
FVVELRKELTDRKKLLTAALPNNTRFVNINSEALNAFDFINIMAYDSTGPWSPNKIEQHSSFEFAKEGVEFWKKQNVPSE
KLTLGVPFYGYNFTYPEVTSSTFGEIIQAGTQFADQDEIGKIYYNGRPTILKKVEYASQNTGGIMIWELAQDSFGEYSLL
EVIHKKYTDLKYKTSGMCGN
>Mature_340_residues
MIKNKALLGILFFMSSLFSVYSCTSEKENNPEEVKSKKARVVGYLSADSFDKITSIEFCKLTHLNIAFANPDKNGNLVFD
GDIDAVTKYVRSVNSNIVISISLAGGVISTEQAANWSLLIDKPENRPAFMQNISKFVTDHNLDGVDVDLEWDAVTSGYSG
FVVELRKELTDRKKLLTAALPNNTRFVNINSEALNAFDFINIMAYDSTGPWSPNKIEQHSSFEFAKEGVEFWKKQNVPSE
KLTLGVPFYGYNFTYPEVTSSTFGEIIQAGTQFADQDEIGKIYYNGRPTILKKVEYASQNTGGIMIWELAQDSFGEYSLL
EVIHKKYTDLKYKTSGMCGN

Specific function: Unknown

COG id: COG3325

COG function: function code G; Chitinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI133893286, Length=245, Percent_Identity=24.4897959183673, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI68533255, Length=338, Percent_Identity=23.0769230769231, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI68533253, Length=338, Percent_Identity=23.0769230769231, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI68533260, Length=307, Percent_Identity=23.1270358306189, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI72000004, Length=281, Percent_Identity=27.0462633451957, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI115533992, Length=375, Percent_Identity=26.4, Blast_Score=81, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI115533995, Length=355, Percent_Identity=23.3802816901408, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17535577, Length=238, Percent_Identity=27.3109243697479, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17535565, Length=217, Percent_Identity=25.3456221198157, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17536195, Length=213, Percent_Identity=27.6995305164319, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17531693, Length=344, Percent_Identity=24.7093023255814, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17535579, Length=239, Percent_Identity=25.5230125523013, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71993650, Length=224, Percent_Identity=25.4464285714286, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17535585, Length=190, Percent_Identity=27.8947368421053, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17535575, Length=239, Percent_Identity=25.5230125523013, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17563680, Length=259, Percent_Identity=25.8687258687259, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17531697, Length=268, Percent_Identity=26.865671641791, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17531695, Length=377, Percent_Identity=22.2811671087533, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI45550474, Length=398, Percent_Identity=24.8743718592965, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI116007452, Length=291, Percent_Identity=25.085910652921, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21358195, Length=209, Percent_Identity=28.2296650717703, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI161077700, Length=273, Percent_Identity=24.9084249084249, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24655584, Length=193, Percent_Identity=27.979274611399, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI221329807, Length=273, Percent_Identity=24.9084249084249, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38074; Mature: 38074

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNKALLGILFFMSSLFSVYSCTSEKENNPEEVKSKKARVVGYLSADSFDKITSIEFCK
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEECCCCCCHHCCEEEEE
LTHLNIAFANPDKNGNLVFDGDIDAVTKYVRSVNSNIVISISLAGGVISTEQAANWSLLI
EEEEEEEEECCCCCCCEEEECCHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCEEEEE
DKPENRPAFMQNISKFVTDHNLDGVDVDLEWDAVTSGYSGFVVELRKELTDRKKLLTAAL
ECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
PNNTRFVNINSEALNAFDFINIMAYDSTGPWSPNKIEQHSSFEFAKEGVEFWKKQNVPSE
CCCCEEEEECHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHH
KLTLGVPFYGYNFTYPEVTSSTFGEIIQAGTQFADQDEIGKIYYNGRPTILKKVEYASQN
HEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHCCCC
TGGIMIWELAQDSFGEYSLLEVIHKKYTDLKYKTSGMCGN
CCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEECCCCCCC
>Mature Secondary Structure
MIKNKALLGILFFMSSLFSVYSCTSEKENNPEEVKSKKARVVGYLSADSFDKITSIEFCK
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEECCCCCCHHCCEEEEE
LTHLNIAFANPDKNGNLVFDGDIDAVTKYVRSVNSNIVISISLAGGVISTEQAANWSLLI
EEEEEEEEECCCCCCCEEEECCHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCEEEEE
DKPENRPAFMQNISKFVTDHNLDGVDVDLEWDAVTSGYSGFVVELRKELTDRKKLLTAAL
ECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
PNNTRFVNINSEALNAFDFINIMAYDSTGPWSPNKIEQHSSFEFAKEGVEFWKKQNVPSE
CCCCEEEEECHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHH
KLTLGVPFYGYNFTYPEVTSSTFGEIIQAGTQFADQDEIGKIYYNGRPTILKKVEYASQN
HEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHCCCC
TGGIMIWELAQDSFGEYSLLEVIHKKYTDLKYKTSGMCGN
CCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA