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The map label for this gene is ylbH [H]

Identifier: 146302244

GI number: 146302244

Start: 5458726

End: 5459334

Strand: Direct

Name: ylbH [H]

Synonym: Fjoh_4517

Alternate gene names: 146302244

Gene position: 5458726-5459334 (Clockwise)

Preceding gene: 146302243

Following gene: 146302246

Centisome position: 89.53

GC content: 35.8

Gene sequence:

>609_bases
ATGAGAATCATTTCAGGAAAATACAAAGGGCGCCGGATTTTTCCACCAAAAAACCTTCCTGTAAGACCCACGACTGATAT
GAGTAAAGAAGCATTGTTTAATGTTTTGAATAATCATTTTAGTTTTGACGGCTTAAAGGTTTTAGATCTATTTTCGGGAA
CCGGTAATATAAGTTATGAATTCGCTTCACGCGGGAGCGCTCCTATTACCTCTATCGATGGCGATTTTGGATGCGTAAAA
TTCATTAAACAAGTTTCATCAGAATACGATTTTGACATTGCGGCTACAAAAAGCGATGTTTATAAATTTCTGGAAAACTG
CAAAACTTCATACGATATTATTTTTGCCGATCCGCCTTACGGATTAGATCAGGCAGCTTTTGAAAAAATCGTTCTTACTG
TTTTTGAAAAAGAACTGCTTTCTGAAGACGGCATGATGATTATCGAACATTCAAAGTATACTAAAATGGAGCATTTAAGT
AATTTTTCTTTCCAGAAAAGTTATGGAGGTTCATTTTTTAGTTTCTTCGAACTGCATTCTACAGACGATGATGAAGAACT
TGAAGGCGATTTACCTTTGAAAGTTGCCGAAGAAGAAGACGAAGGTTAA

Upstream 100 bases:

>100_bases
AATACATTCGTAATATTTCTTTTCTTGATGTAAGCACTTTAAAAGAAAGAAACAACTATACAACTGCTCAGAATCAAAAA
CATTATATCTTATTTCAATC

Downstream 100 bases:

>100_bases
CCATTATAAAAAAATTCCCGTTAGATTCACGGGAATTTTTGTTTCTATCTTATTCTGTTTTCATTTTCATTTACACTCTT
TTCTTTAAAACCGCTTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MRIISGKYKGRRIFPPKNLPVRPTTDMSKEALFNVLNNHFSFDGLKVLDLFSGTGNISYEFASRGSAPITSIDGDFGCVK
FIKQVSSEYDFDIAATKSDVYKFLENCKTSYDIIFADPPYGLDQAAFEKIVLTVFEKELLSEDGMMIIEHSKYTKMEHLS
NFSFQKSYGGSFFSFFELHSTDDDEELEGDLPLKVAEEEDEG

Sequences:

>Translated_202_residues
MRIISGKYKGRRIFPPKNLPVRPTTDMSKEALFNVLNNHFSFDGLKVLDLFSGTGNISYEFASRGSAPITSIDGDFGCVK
FIKQVSSEYDFDIAATKSDVYKFLENCKTSYDIIFADPPYGLDQAAFEKIVLTVFEKELLSEDGMMIIEHSKYTKMEHLS
NFSFQKSYGGSFFSFFELHSTDDDEELEGDLPLKVAEEEDEG
>Mature_202_residues
MRIISGKYKGRRIFPPKNLPVRPTTDMSKEALFNVLNNHFSFDGLKVLDLFSGTGNISYEFASRGSAPITSIDGDFGCVK
FIKQVSSEYDFDIAATKSDVYKFLENCKTSYDIIFADPPYGLDQAAFEKIVLTVFEKELLSEDGMMIIEHSKYTKMEHLS
NFSFQKSYGGSFFSFFELHSTDDDEELEGDLPLKVAEEEDEG

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

Organism=Escherichia coli, GI1789875, Length=168, Percent_Identity=27.3809523809524, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 22867; Mature: 22867

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIISGKYKGRRIFPPKNLPVRPTTDMSKEALFNVLNNHFSFDGLKVLDLFSGTGNISYE
CCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEE
FASRGSAPITSIDGDFGCVKFIKQVSSEYDFDIAATKSDVYKFLENCKTSYDIIFADPPY
ECCCCCCCCEECCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCCEEEECCCCC
GLDQAAFEKIVLTVFEKELLSEDGMMIIEHSKYTKMEHLSNFSFQKSYGGSFFSFFELHS
CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCHHHCCCCEEEEEEECC
TDDDEELEGDLPLKVAEEEDEG
CCCHHHCCCCCCEEECCCCCCC
>Mature Secondary Structure
MRIISGKYKGRRIFPPKNLPVRPTTDMSKEALFNVLNNHFSFDGLKVLDLFSGTGNISYE
CCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEE
FASRGSAPITSIDGDFGCVKFIKQVSSEYDFDIAATKSDVYKFLENCKTSYDIIFADPPY
ECCCCCCCCEECCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCCEEEECCCCC
GLDQAAFEKIVLTVFEKELLSEDGMMIIEHSKYTKMEHLSNFSFQKSYGGSFFSFFELHS
CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCHHHCCCCEEEEEEECC
TDDDEELEGDLPLKVAEEEDEG
CCCHHHCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]