Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302205

Identifier: 146302205

GI number: 146302205

Start: 5399136

End: 5399879

Strand: Reverse

Name: 146302205

Synonym: Fjoh_4476

Alternate gene names: NA

Gene position: 5399879-5399136 (Counterclockwise)

Preceding gene: 146302206

Following gene: 146302204

Centisome position: 88.57

GC content: 28.63

Gene sequence:

>744_bases
ATGTCTCAAACAAGATTAAGAATATTTGCAGGCCCAAACGGCTCAGGAAAAAGCACTCTGTTTGATTCTTTTTCAAAAAA
ATACAATTCGGGAGTGTTTCTTAACGCTGATTTAATTGAAAAAGAATTAGCAAGTAACGGATTTATTGATTTAACTGAAT
ATAATTTAAATTTAACGCAAGCTGATTTAGACGAATTTTTAAAAACAGAAAGAGCAGTTTCGTTAATAAAAAAATCTATT
GAAGATAATCATAAAATAGATTTTTCTTTAAAAGAAAATGTAATAGTTGATGTAGATAAGGAAACTCACAGTTATGAGGG
CGCCCTAATAAGTGCTTTTTTAAGACATCATTTGCAGGAAAGCAGAATTGATTTTTGCTTTGAAACAGTAATGAGCCATC
CTTCAAAAATTGAAGAGATAAAGGAAGCAAAACAAAAGGGCTATAAAACATATTTATATTTTATTTGTATTGATGATCCA
GAAGTAAATGTTTCTCGAGTTGAAAATAGAGTAAGCAAAGGAGGACATAATGTTGCTCCAGAAAAAATTTCCAGTAGATA
TTATAATACATTGAGTAATCTGCTTCCCATGATTGAAAATGTGGATAAATGTTATCTATTTGATAATTCAAGTGAAGAAT
ATAAATTGATTGCAAAAATTTCAGAAAATAAGTTATCATTGGAAATTGGACCTTCTGAACTCCCTAATTGGTTCATTGAT
TATGTACTTAAATATTACATATAA

Upstream 100 bases:

>100_bases
ATTAATCCCGATAAGACGATAAAAGTAATAAGAAAAATATCAAAACCTACTATTGACATATCATCTTTAAAAAAAGGAAT
GATTTTAGAAAGAAAGTAGT

Downstream 100 bases:

>100_bases
ATAAAATTCGATAGCCGCGAAGTTTTTTACATTTTCCTTCTAATCGTATAACTGACATACAAACGAGCATAGTATGAAAA
ACTAATTGTGCCGACCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSQTRLRIFAGPNGSGKSTLFDSFSKKYNSGVFLNADLIEKELASNGFIDLTEYNLNLTQADLDEFLKTERAVSLIKKSI
EDNHKIDFSLKENVIVDVDKETHSYEGALISAFLRHHLQESRIDFCFETVMSHPSKIEEIKEAKQKGYKTYLYFICIDDP
EVNVSRVENRVSKGGHNVAPEKISSRYYNTLSNLLPMIENVDKCYLFDNSSEEYKLIAKISENKLSLEIGPSELPNWFID
YVLKYYI

Sequences:

>Translated_247_residues
MSQTRLRIFAGPNGSGKSTLFDSFSKKYNSGVFLNADLIEKELASNGFIDLTEYNLNLTQADLDEFLKTERAVSLIKKSI
EDNHKIDFSLKENVIVDVDKETHSYEGALISAFLRHHLQESRIDFCFETVMSHPSKIEEIKEAKQKGYKTYLYFICIDDP
EVNVSRVENRVSKGGHNVAPEKISSRYYNTLSNLLPMIENVDKCYLFDNSSEEYKLIAKISENKLSLEIGPSELPNWFID
YVLKYYI
>Mature_246_residues
SQTRLRIFAGPNGSGKSTLFDSFSKKYNSGVFLNADLIEKELASNGFIDLTEYNLNLTQADLDEFLKTERAVSLIKKSIE
DNHKIDFSLKENVIVDVDKETHSYEGALISAFLRHHLQESRIDFCFETVMSHPSKIEEIKEAKQKGYKTYLYFICIDDPE
VNVSRVENRVSKGGHNVAPEKISSRYYNTLSNLLPMIENVDKCYLFDNSSEEYKLIAKISENKLSLEIGPSELPNWFIDY
VLKYYI

Specific function: Unknown

COG id: COG4185

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28411; Mature: 28280

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTRLRIFAGPNGSGKSTLFDSFSKKYNSGVFLNADLIEKELASNGFIDLTEYNLNLTQ
CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCEEEEECCCCCCH
ADLDEFLKTERAVSLIKKSIEDNHKIDFSLKENVIVDVDKETHSYEGALISAFLRHHLQE
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHH
SRIDFCFETVMSHPSKIEEIKEAKQKGYKTYLYFICIDDPEVNVSRVENRVSKGGHNVAP
HHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCH
EKISSRYYNTLSNLLPMIENVDKCYLFDNSSEEYKLIAKISENKLSLEIGPSELPNWFID
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCEEEEEECHHHCHHHHHH
YVLKYYI
HHHHHCC
>Mature Secondary Structure 
SQTRLRIFAGPNGSGKSTLFDSFSKKYNSGVFLNADLIEKELASNGFIDLTEYNLNLTQ
CCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCEEEEECCCCCCH
ADLDEFLKTERAVSLIKKSIEDNHKIDFSLKENVIVDVDKETHSYEGALISAFLRHHLQE
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHH
SRIDFCFETVMSHPSKIEEIKEAKQKGYKTYLYFICIDDPEVNVSRVENRVSKGGHNVAP
HHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCH
EKISSRYYNTLSNLLPMIENVDKCYLFDNSSEEYKLIAKISENKLSLEIGPSELPNWFID
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCEEEEEECHHHCHHHHHH
YVLKYYI
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA