| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302188
Identifier: 146302188
GI number: 146302188
Start: 5374196
End: 5374792
Strand: Reverse
Name: 146302188
Synonym: Fjoh_4457
Alternate gene names: NA
Gene position: 5374792-5374196 (Counterclockwise)
Preceding gene: 146302189
Following gene: 146302187
Centisome position: 88.16
GC content: 37.69
Gene sequence:
>597_bases ATGATTTTTGAACATCTCAAGCAAAACAAATCTATTGATGATAATGAGTTTAACGAACTGTACCCTATTAGGATAAAGAA GCTGGCCCCCCGTCACTGGACCCCTGTAAAAATAGCCAGAAAAGCAGCTGATTTTTTAGTGGACAAACCTGATAAAAAAG TATTGGATATAGGCTCGGGGGCTGGAAAATTCTGCCTTGTGGGGGCAGCTTTAACGAATGGAATTTTTTATGGGGTGGAG CAAAGGAAATCGCTTATAAAATTATCGCGGAAAATAGCCAAAAAATATAAGATTGATAATGCAGAATTCATACACTCAAA TATTATGGAGATATCTTTTTTGGATTATGAAGCTTTCTATTTTTTTAATTCATTTCAGGAAAATATAGATCTGACAGCCC GTATTGACAAATCAAGTGCTCCAAGTGGGGAACTATATCATCTATATACCGGTTATCTTAAAGACCAGCTGTATAAAACT CCCATTGGCACAAAACTGGTCACCTACTGGAGCAATTGCAGAGAGGTTCCAAAAAGTTTCTGCTTAGAAGCTATTTCGCA CAGCGGGGTATTAATCTTCTGGAGAAAAACGGCTTAG
Upstream 100 bases:
>100_bases TAAATATATTCGAACTCTCTATACTTTTGCCATTTGTTAAATTATTCTATTTAGTAAGGAAAATTAAGCCAACTGCAGCA AATGCAAAAGTATTTATAAA
Downstream 100 bases:
>100_bases ATTGGAGCATTAAATATATAAACATTACTCAATAAAATTAATTAAAATATGGACAGTGAAGAATATATCAATTTAGAATA TGTTCTGAGAAGTCTTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MIFEHLKQNKSIDDNEFNELYPIRIKKLAPRHWTPVKIARKAADFLVDKPDKKVLDIGSGAGKFCLVGAALTNGIFYGVE QRKSLIKLSRKIAKKYKIDNAEFIHSNIMEISFLDYEAFYFFNSFQENIDLTARIDKSSAPSGELYHLYTGYLKDQLYKT PIGTKLVTYWSNCREVPKSFCLEAISHSGVLIFWRKTA
Sequences:
>Translated_198_residues MIFEHLKQNKSIDDNEFNELYPIRIKKLAPRHWTPVKIARKAADFLVDKPDKKVLDIGSGAGKFCLVGAALTNGIFYGVE QRKSLIKLSRKIAKKYKIDNAEFIHSNIMEISFLDYEAFYFFNSFQENIDLTARIDKSSAPSGELYHLYTGYLKDQLYKT PIGTKLVTYWSNCREVPKSFCLEAISHSGVLIFWRKTA >Mature_198_residues MIFEHLKQNKSIDDNEFNELYPIRIKKLAPRHWTPVKIARKAADFLVDKPDKKVLDIGSGAGKFCLVGAALTNGIFYGVE QRKSLIKLSRKIAKKYKIDNAEFIHSNIMEISFLDYEAFYFFNSFQENIDLTARIDKSSAPSGELYHLYTGYLKDQLYKT PIGTKLVTYWSNCREVPKSFCLEAISHSGVLIFWRKTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22815; Mature: 22815
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFEHLKQNKSIDDNEFNELYPIRIKKLAPRHWTPVKIARKAADFLVDKPDKKVLDIGSG CCCHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCC AGKFCLVGAALTNGIFYGVEQRKSLIKLSRKIAKKYKIDNAEFIHSNIMEISFLDYEAFY CCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEEECHHHHH FFNSFQENIDLTARIDKSSAPSGELYHLYTGYLKDQLYKTPIGTKLVTYWSNCREVPKSF HHHHHHHCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH CLEAISHSGVLIFWRKTA HHHHHCCCCEEEEEEECC >Mature Secondary Structure MIFEHLKQNKSIDDNEFNELYPIRIKKLAPRHWTPVKIARKAADFLVDKPDKKVLDIGSG CCCHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCC AGKFCLVGAALTNGIFYGVEQRKSLIKLSRKIAKKYKIDNAEFIHSNIMEISFLDYEAFY CCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEEECHHHHH FFNSFQENIDLTARIDKSSAPSGELYHLYTGYLKDQLYKTPIGTKLVTYWSNCREVPKSF HHHHHHHCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH CLEAISHSGVLIFWRKTA HHHHHCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA