| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302164
Identifier: 146302164
GI number: 146302164
Start: 5345938
End: 5347401
Strand: Reverse
Name: 146302164
Synonym: Fjoh_4432
Alternate gene names: NA
Gene position: 5347401-5345938 (Counterclockwise)
Preceding gene: 146302165
Following gene: 146302163
Centisome position: 87.71
GC content: 37.91
Gene sequence:
>1464_bases ATGAAAAAAAATAGAAATTATATAGTTTGGACAAGATACGTGATTGTCTTCTTGTTGTTTTTATCTGCAGCTTTGTCAAG CTGCAGCAATGATGATCTTCAGGCTAAAAATTTTAGTGCTGATGTGTTAAAGCTTACGTTGAGCAGTACTGACATGGTTT TGGATCAAAGCATGTTCCAGCAAAAATTCAGTTTTAAATGGAGTACAGGTGATAACAAGGGAACAGGTGCTTCGATTTCA TATAAACTGGAAATTGACAAGAAAGAAAATAATTTCGTTAATGCAGTTGAATATGATTTTGGAAAAAACAGATACGACTT TGATATTAATGTGGCAACATTAAATTCAATACTGCTCACAACTTTTAACGGAGAGCCTGGTAAAGTGATTGTTTTGCAGG CAAGGATTACAGCAACTTTTGGTGATAAAAGTGTGACGCCTCAAACTTCAATAATCGATTTTAATTTAACTCCCTATCAG CCGTTATCAACCGAACTGTTCATGGTCGGTGATGCATCACCAAATGGTTGGGATATTACAAAGGCTTTTGCTCTGACTGC CCAGACAGCTAATCCTGTTGTTTTTGTATATTCTGGCCAGTTAAGTAAAGGTAAATTCAAATTTGCAGTAAATACGGATT CTTGCTGGTGCCAGGACTTTTATACAAAAGATGCTGCTGATACAGGCAAGATAGTCCATAATACTGGCGGAAGCGGTTCT GACCTGCAATGGGAAATTACCAAAGCAGGACTTTACAAAATTACAGTGAACTTGCTAAAATTAACTATTGTAATTGAAGA ACAGGAATCTCCAGCTTTTACACAATTATGGATTGTAGGTGATGCAAGTCCGAGCGGCTGGAATGTCGATACGCCAGAAG CCTTTACGGTTACAGATAATCCTTTTATTTTCACATACGAAGCTAATTTAACGCCTGGAAACTTTAAAATAATGGCTGGC ACAAAAGGAGGCTGGTGCGGAGAATGGTACAGACCATTGGTGGATAATCAAGGTTTGACCGAAACAGGCGTTGCACAGAA TTCCGGCTGTGATGTAGATAATAAATGGCAGGTTACAGCACAGACTGCAGGCAGATACAAAATTACACTTGATATAAGTA CAAACGTTATTAAGATTGTCCCTGTTGAAGTTTATCTGATTGGCAGTGCTACACCAAATGGATGGAATATGGGCTCATTG CTTCCGATGACTAAAAATGGAAGTGTCTATACTTACAGTGGACCTTTGACTGCAGGTGAATTTAAATTTACAAAATACAA TACCAATTGGTGTGAGGGGACTGAAATTACACCAGTATCAGCAAACCAGGCGATTACTAATACAAATTTTACTAAACGTG ATAAATGTGATGGTGACGATAATAAATGGGTGGTAAGCGCAGCACAGGCAGGCAACCATACTATTACATTAGATCTTTCA ACAAATGTCCTTACAATCAACTAA
Upstream 100 bases:
>100_bases TAATGCTGATCAGCATCACTTGCTGCTTCCTATACCGCAGATTGAGCGTGACAGAAATCCTAATTTATCTCAAAATCCAG GTTACTAAAATTGTAGTGCT
Downstream 100 bases:
>100_bases AGATGAGTATTAAAAATAAAATAATAAAGCTGTTTTTTCTTTGCCTCTTTTTATGTTTTGCATCATGCCAGAGTGATGAT GACAATGGAAAGATTGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MKKNRNYIVWTRYVIVFLLFLSAALSSCSNDDLQAKNFSADVLKLTLSSTDMVLDQSMFQQKFSFKWSTGDNKGTGASIS YKLEIDKKENNFVNAVEYDFGKNRYDFDINVATLNSILLTTFNGEPGKVIVLQARITATFGDKSVTPQTSIIDFNLTPYQ PLSTELFMVGDASPNGWDITKAFALTAQTANPVVFVYSGQLSKGKFKFAVNTDSCWCQDFYTKDAADTGKIVHNTGGSGS DLQWEITKAGLYKITVNLLKLTIVIEEQESPAFTQLWIVGDASPSGWNVDTPEAFTVTDNPFIFTYEANLTPGNFKIMAG TKGGWCGEWYRPLVDNQGLTETGVAQNSGCDVDNKWQVTAQTAGRYKITLDISTNVIKIVPVEVYLIGSATPNGWNMGSL LPMTKNGSVYTYSGPLTAGEFKFTKYNTNWCEGTEITPVSANQAITNTNFTKRDKCDGDDNKWVVSAAQAGNHTITLDLS TNVLTIN
Sequences:
>Translated_487_residues MKKNRNYIVWTRYVIVFLLFLSAALSSCSNDDLQAKNFSADVLKLTLSSTDMVLDQSMFQQKFSFKWSTGDNKGTGASIS YKLEIDKKENNFVNAVEYDFGKNRYDFDINVATLNSILLTTFNGEPGKVIVLQARITATFGDKSVTPQTSIIDFNLTPYQ PLSTELFMVGDASPNGWDITKAFALTAQTANPVVFVYSGQLSKGKFKFAVNTDSCWCQDFYTKDAADTGKIVHNTGGSGS DLQWEITKAGLYKITVNLLKLTIVIEEQESPAFTQLWIVGDASPSGWNVDTPEAFTVTDNPFIFTYEANLTPGNFKIMAG TKGGWCGEWYRPLVDNQGLTETGVAQNSGCDVDNKWQVTAQTAGRYKITLDISTNVIKIVPVEVYLIGSATPNGWNMGSL LPMTKNGSVYTYSGPLTAGEFKFTKYNTNWCEGTEITPVSANQAITNTNFTKRDKCDGDDNKWVVSAAQAGNHTITLDLS TNVLTIN >Mature_487_residues MKKNRNYIVWTRYVIVFLLFLSAALSSCSNDDLQAKNFSADVLKLTLSSTDMVLDQSMFQQKFSFKWSTGDNKGTGASIS YKLEIDKKENNFVNAVEYDFGKNRYDFDINVATLNSILLTTFNGEPGKVIVLQARITATFGDKSVTPQTSIIDFNLTPYQ PLSTELFMVGDASPNGWDITKAFALTAQTANPVVFVYSGQLSKGKFKFAVNTDSCWCQDFYTKDAADTGKIVHNTGGSGS DLQWEITKAGLYKITVNLLKLTIVIEEQESPAFTQLWIVGDASPSGWNVDTPEAFTVTDNPFIFTYEANLTPGNFKIMAG TKGGWCGEWYRPLVDNQGLTETGVAQNSGCDVDNKWQVTAQTAGRYKITLDISTNVIKIVPVEVYLIGSATPNGWNMGSL LPMTKNGSVYTYSGPLTAGEFKFTKYNTNWCEGTEITPVSANQAITNTNFTKRDKCDGDDNKWVVSAAQAGNHTITLDLS TNVLTIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53628; Mature: 53628
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNRNYIVWTRYVIVFLLFLSAALSSCSNDDLQAKNFSADVLKLTLSSTDMVLDQSMFQ CCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH QKFSFKWSTGDNKGTGASISYKLEIDKKENNFVNAVEYDFGKNRYDFDINVATLNSILLT HHHEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEEEE TFNGEPGKVIVLQARITATFGDKSVTPQTSIIDFNLTPYQPLSTELFMVGDASPNGWDIT EECCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCEEE KAFALTAQTANPVVFVYSGQLSKGKFKFAVNTDSCWCQDFYTKDAADTGKIVHNTGGSGS EEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCEEEEHHHCCCCCCCCCEEECCCCCCC DLQWEITKAGLYKITVNLLKLTIVIEEQESPAFTQLWIVGDASPSGWNVDTPEAFTVTDN CEEEEEECCCEEEEEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECC PFIFTYEANLTPGNFKIMAGTKGGWCGEWYRPLVDNQGLTETGVAQNSGCDVDNKWQVTA CEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEE QTAGRYKITLDISTNVIKIVPVEVYLIGSATPNGWNMGSLLPMTKNGSVYTYSGPLTAGE ECCCEEEEEEEECCCEEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCEEEECCCCCCCE FKFTKYNTNWCEGTEITPVSANQAITNTNFTKRDKCDGDDNKWVVSAAQAGNHTITLDLS EEEEEECCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEC TNVLTIN CCEEEEC >Mature Secondary Structure MKKNRNYIVWTRYVIVFLLFLSAALSSCSNDDLQAKNFSADVLKLTLSSTDMVLDQSMFQ CCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH QKFSFKWSTGDNKGTGASISYKLEIDKKENNFVNAVEYDFGKNRYDFDINVATLNSILLT HHHEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEEEE TFNGEPGKVIVLQARITATFGDKSVTPQTSIIDFNLTPYQPLSTELFMVGDASPNGWDIT EECCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCEEE KAFALTAQTANPVVFVYSGQLSKGKFKFAVNTDSCWCQDFYTKDAADTGKIVHNTGGSGS EEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCEEEEHHHCCCCCCCCCEEECCCCCCC DLQWEITKAGLYKITVNLLKLTIVIEEQESPAFTQLWIVGDASPSGWNVDTPEAFTVTDN CEEEEEECCCEEEEEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECC PFIFTYEANLTPGNFKIMAGTKGGWCGEWYRPLVDNQGLTETGVAQNSGCDVDNKWQVTA CEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEE QTAGRYKITLDISTNVIKIVPVEVYLIGSATPNGWNMGSLLPMTKNGSVYTYSGPLTAGE ECCCEEEEEEEECCCEEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCEEEECCCCCCCE FKFTKYNTNWCEGTEITPVSANQAITNTNFTKRDKCDGDDNKWVVSAAQAGNHTITLDLS EEEEEECCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEC TNVLTIN CCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA