| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302161
Identifier: 146302161
GI number: 146302161
Start: 5339389
End: 5341512
Strand: Reverse
Name: 146302161
Synonym: Fjoh_4429
Alternate gene names: NA
Gene position: 5341512-5339389 (Counterclockwise)
Preceding gene: 146302162
Following gene: 146302160
Centisome position: 87.61
GC content: 38.47
Gene sequence:
>2124_bases ATGAAACACTTTTTTCTCACCGCTATTTTGTGGTTTGGCATTTTTACTGCCAATGCACAGGATTTAAAATCGCCTGACGG CAACTTTTTAATGCACTTTTCCCTGGAGGCAGACGGTACTCCGGTTTATAAATTAATTTATAAAGGAAAAGACGTTATAA AAGCAAGCAAGTTAGGTTTTACGCTTAAAAATGATAATAAGTCCTTATTAAATGATTTTAAAATAGAAGACACTAAAACT AGTTCTTTCGATGAAAATTGGAAACCTGTATGGGGAGAAGTTTCATCAATTAGAAACAATTATAATGAATTGGCTGTAAG CCTGAGCCAAAAAGAAACAGATAGAAAAATGATCATTAGATTTCGTCTTTTTGATGATGGACTGGGTTTCCGTTACGAAT TTCCCCAGCAAAATAACCTGATTTATTTCACCATTAAGGAAGAACGAACCCAGTTTGCTATGGCGGGAGACCATACCGCT TATTGGATTCCCGGAGACTATGATACGCAGGAATACAATTATAGTACTTCAAAACTTTCTGAAATAAGAGGCCTGATGGA AAAAGCATATACAAAAGGAAATGCTTCGCAGACGTCATTCTCTCCAACCGGCGTGCAGACTTCACTAATGATGAAAAGCC AGGATGGATTGTATATTAACCTGCATGAAGCTGCATTAATTAATTATTCCTGCATGCATCTTAATCTAGATGATAAAAAT TTTGTATTTGAATCATGGCTGACGCCTGATTCACATGGGGATAAGGGTAAGATGCAGGCACCTTGCAAAACGCCATGGAG AACTGTTATTGTTAGTGATGATGCACGTAACATTTTGGCTTCGAAATTGACTTATAACTTGAACGAACCAAGTAAAATTC AAGAAACATCATGGATCAAACCAACAAAATATGTGGGTGTATGGTGGGAAATGATTTCAGGAAAAAGTACCTGGTCTTAC ACTGATGAATTTCCTTCTGTTCAGCTTGGCGTTACCGATTTCTCTAAAGCCAAACCAAATAGGAAACATGGCGCAACTAC CGCCAATGTGAAAAGATATATAGACTTTGCAGCTAAAAATGGATTTGATGCGGTGCTGGTTGAAGGATGGAACGAAGGCT GGGAAGACTGGATTGGCCATGAGAAAGATTATGTTTTTGATTTCGTTACGCCATATCCCGATTTTGACATAAAAGGATTA AATGAATATGCACATGCAAAGAAGGTAAAACTTATTATGCATCATGAAACTTCAGGGGCGGTACGTAATTATGAGCGTCA TATGGATGCTGCATACAAATTGATGAAGCAATATGGTTACGATGCTGTAAAAAGTGGATATGTAGGCAATATACTTCCGC TTGGTGAGACGCATTACAGCCAATGGACAAATAATCATTATCAATATGCCATTGAGAAAGCAGCAGATTATCAAATTATG GTAAATGCGCACGAAGCAGTCCGTCCGACTGGAATTGCACGTACTTATCCAAATCTTATCGGAAATGAAGCTGCACGTGG AACCGAATATCAGGCTTTCGGTAATGACAGAAATAATGCAAACCATGTCACAATACTGCCTTTTACAAGACTGATTGGTG GACCAATGGACTATACTCCGGGAATTTTTGAAATGGATGTAACAAATGGTTCACATGTAAACGCTACTATTGCTAATCAA TTAGCGCTTTACGTAACGATGTACAGTCCATTGCAGATGGCGGCAGATTTTCCTGAAAACTATGAACGTTTTGCAGATGC TTTCCAATTTATTAAGGATGTTGCGGTGGATTGGGATGACAGCAGATATCTTGAAGCTGAACCTGGCCAGTATATTACAG TAGCCAGAAAGGCCAAAGGAACTGACAACTGGTTTTTAGGAAATGTAAACGGAGAAACAGCGCGTGTGTCCAATATCGAT CTTGGATTTCTTGAAAAAGGGAAAAAGTATACCGCTGTAATTTATGCTGATGCTAAAGACGCAAATTATAAAACTAATAC CCAGGCCTACACAATCCGTAAAGTTGTTGTTACGAGCAATTCAAAGCTTTCGCAATTTTCGGCTTCGGGTGGAGGATATG CTATTAGTTTTTATCCTGTAGCTGATGCAGCAAAAAAAAAGTGA
Upstream 100 bases:
>100_bases GGAGCTGGAATGAAGCTGAAAATGTTATCTCAGTAAGAATTCCTGATTCAGGAAAAAATGCAGTAATCACAATTAAAAAT TAAATACTATTATACTCACA
Downstream 100 bases:
>100_bases TAAAGACCTAAACAAAATAAAAATTTAATTAATTAGTTTTTTAAAGATCGTTGCTGTTAAACAGACTGCAGCGATCTTTA TGTATTATAACTAACCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase; Glycoside Hydrolase Family; Alpha-Glucosidase Family Protein; Alpha-Glucosidase Protein; Glycoside Hydrolase Family Protein; Esterase; Alpha-Glucosidase-Like Protein; Glycosyl Hydrolase Family; Alpha-Glucosidase SusB; Secreted Protein
Number of amino acids: Translated: 707; Mature: 707
Protein sequence:
>707_residues MKHFFLTAILWFGIFTANAQDLKSPDGNFLMHFSLEADGTPVYKLIYKGKDVIKASKLGFTLKNDNKSLLNDFKIEDTKT SSFDENWKPVWGEVSSIRNNYNELAVSLSQKETDRKMIIRFRLFDDGLGFRYEFPQQNNLIYFTIKEERTQFAMAGDHTA YWIPGDYDTQEYNYSTSKLSEIRGLMEKAYTKGNASQTSFSPTGVQTSLMMKSQDGLYINLHEAALINYSCMHLNLDDKN FVFESWLTPDSHGDKGKMQAPCKTPWRTVIVSDDARNILASKLTYNLNEPSKIQETSWIKPTKYVGVWWEMISGKSTWSY TDEFPSVQLGVTDFSKAKPNRKHGATTANVKRYIDFAAKNGFDAVLVEGWNEGWEDWIGHEKDYVFDFVTPYPDFDIKGL NEYAHAKKVKLIMHHETSGAVRNYERHMDAAYKLMKQYGYDAVKSGYVGNILPLGETHYSQWTNNHYQYAIEKAADYQIM VNAHEAVRPTGIARTYPNLIGNEAARGTEYQAFGNDRNNANHVTILPFTRLIGGPMDYTPGIFEMDVTNGSHVNATIANQ LALYVTMYSPLQMAADFPENYERFADAFQFIKDVAVDWDDSRYLEAEPGQYITVARKAKGTDNWFLGNVNGETARVSNID LGFLEKGKKYTAVIYADAKDANYKTNTQAYTIRKVVVTSNSKLSQFSASGGGYAISFYPVADAAKKK
Sequences:
>Translated_707_residues MKHFFLTAILWFGIFTANAQDLKSPDGNFLMHFSLEADGTPVYKLIYKGKDVIKASKLGFTLKNDNKSLLNDFKIEDTKT SSFDENWKPVWGEVSSIRNNYNELAVSLSQKETDRKMIIRFRLFDDGLGFRYEFPQQNNLIYFTIKEERTQFAMAGDHTA YWIPGDYDTQEYNYSTSKLSEIRGLMEKAYTKGNASQTSFSPTGVQTSLMMKSQDGLYINLHEAALINYSCMHLNLDDKN FVFESWLTPDSHGDKGKMQAPCKTPWRTVIVSDDARNILASKLTYNLNEPSKIQETSWIKPTKYVGVWWEMISGKSTWSY TDEFPSVQLGVTDFSKAKPNRKHGATTANVKRYIDFAAKNGFDAVLVEGWNEGWEDWIGHEKDYVFDFVTPYPDFDIKGL NEYAHAKKVKLIMHHETSGAVRNYERHMDAAYKLMKQYGYDAVKSGYVGNILPLGETHYSQWTNNHYQYAIEKAADYQIM VNAHEAVRPTGIARTYPNLIGNEAARGTEYQAFGNDRNNANHVTILPFTRLIGGPMDYTPGIFEMDVTNGSHVNATIANQ LALYVTMYSPLQMAADFPENYERFADAFQFIKDVAVDWDDSRYLEAEPGQYITVARKAKGTDNWFLGNVNGETARVSNID LGFLEKGKKYTAVIYADAKDANYKTNTQAYTIRKVVVTSNSKLSQFSASGGGYAISFYPVADAAKKK >Mature_707_residues MKHFFLTAILWFGIFTANAQDLKSPDGNFLMHFSLEADGTPVYKLIYKGKDVIKASKLGFTLKNDNKSLLNDFKIEDTKT SSFDENWKPVWGEVSSIRNNYNELAVSLSQKETDRKMIIRFRLFDDGLGFRYEFPQQNNLIYFTIKEERTQFAMAGDHTA YWIPGDYDTQEYNYSTSKLSEIRGLMEKAYTKGNASQTSFSPTGVQTSLMMKSQDGLYINLHEAALINYSCMHLNLDDKN FVFESWLTPDSHGDKGKMQAPCKTPWRTVIVSDDARNILASKLTYNLNEPSKIQETSWIKPTKYVGVWWEMISGKSTWSY TDEFPSVQLGVTDFSKAKPNRKHGATTANVKRYIDFAAKNGFDAVLVEGWNEGWEDWIGHEKDYVFDFVTPYPDFDIKGL NEYAHAKKVKLIMHHETSGAVRNYERHMDAAYKLMKQYGYDAVKSGYVGNILPLGETHYSQWTNNHYQYAIEKAADYQIM VNAHEAVRPTGIARTYPNLIGNEAARGTEYQAFGNDRNNANHVTILPFTRLIGGPMDYTPGIFEMDVTNGSHVNATIANQ LALYVTMYSPLQMAADFPENYERFADAFQFIKDVAVDWDDSRYLEAEPGQYITVARKAKGTDNWFLGNVNGETARVSNID LGFLEKGKKYTAVIYADAKDANYKTNTQAYTIRKVVVTSNSKLSQFSASGGGYAISFYPVADAAKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80318; Mature: 80318
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHFFLTAILWFGIFTANAQDLKSPDGNFLMHFSLEADGTPVYKLIYKGKDVIKASKLGF CCHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCHHEEHHHCCE TLKNDNKSLLNDFKIEDTKTSSFDENWKPVWGEVSSIRNNYNELAVSLSQKETDRKMIIR EEECCCHHHHCCEECCCCCCCCCCCCCCCHHHHHHHHHCCHHHEEEEECCCCCCCEEEEE FRLFDDGLGFRYEFPQQNNLIYFTIKEERTQFAMAGDHTAYWIPGDYDTQEYNYSTSKLS EEEEECCCCCEEECCCCCCEEEEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCHHHHH EIRGLMEKAYTKGNASQTSFSPTGVQTSLMMKSQDGLYINLHEAALINYSCMHLNLDDKN HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECEEEEEEEEEEEECCCCC FVFESWLTPDSHGDKGKMQAPCKTPWRTVIVSDDARNILASKLTYNLNEPSKIQETSWIK EEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHEECCCCCCCCCCCCCCC PTKYVGVWWEMISGKSTWSYTDEFPSVQLGVTDFSKAKPNRKHGATTANVKRYIDFAAKN CCHHHEEEHHHHCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHCC GFDAVLVEGWNEGWEDWIGHEKDYVFDFVTPYPDFDIKGLNEYAHAKKVKLIMHHETSGA CCCEEEEECCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHEEEEEEEEECCCCH VRNYERHMDAAYKLMKQYGYDAVKSGYVGNILPLGETHYSQWTNNHYQYAIEKAADYQIM HHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEECCCCHHHHHCCCCEEEEEECCCCEEEE VNAHEAVRPTGIARTYPNLIGNEAARGTEYQAFGNDRNNANHVTILPFTRLIGGPMDYTP EECCHHCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEEEEEHHHHCCCCCCCC GIFEMDVTNGSHVNATIANQLALYVTMYSPLQMAADFPENYERFADAFQFIKDVAVDWDD CEEEEECCCCCEEEEEHHCCEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC SRYLEAEPGQYITVARKAKGTDNWFLGNVNGETARVSNIDLGFLEKGKKYTAVIYADAKD CCEEECCCCCEEEEEEECCCCCCEEEECCCCCEEEEECCCCHHHCCCCEEEEEEEECCCC ANYKTNTQAYTIRKVVVTSNSKLSQFSASGGGYAISFYPVADAAKKK CCCCCCCEEEEEEEEEEECCCCHHEEECCCCCEEEEEEECCCCCCCC >Mature Secondary Structure MKHFFLTAILWFGIFTANAQDLKSPDGNFLMHFSLEADGTPVYKLIYKGKDVIKASKLGF CCHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCHHEEHHHCCE TLKNDNKSLLNDFKIEDTKTSSFDENWKPVWGEVSSIRNNYNELAVSLSQKETDRKMIIR EEECCCHHHHCCEECCCCCCCCCCCCCCCHHHHHHHHHCCHHHEEEEECCCCCCCEEEEE FRLFDDGLGFRYEFPQQNNLIYFTIKEERTQFAMAGDHTAYWIPGDYDTQEYNYSTSKLS EEEEECCCCCEEECCCCCCEEEEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCHHHHH EIRGLMEKAYTKGNASQTSFSPTGVQTSLMMKSQDGLYINLHEAALINYSCMHLNLDDKN HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECEEEEEEEEEEEECCCCC FVFESWLTPDSHGDKGKMQAPCKTPWRTVIVSDDARNILASKLTYNLNEPSKIQETSWIK EEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHEECCCCCCCCCCCCCCC PTKYVGVWWEMISGKSTWSYTDEFPSVQLGVTDFSKAKPNRKHGATTANVKRYIDFAAKN CCHHHEEEHHHHCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHCC GFDAVLVEGWNEGWEDWIGHEKDYVFDFVTPYPDFDIKGLNEYAHAKKVKLIMHHETSGA CCCEEEEECCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHEEEEEEEEECCCCH VRNYERHMDAAYKLMKQYGYDAVKSGYVGNILPLGETHYSQWTNNHYQYAIEKAADYQIM HHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEECCCCHHHHHCCCCEEEEEECCCCEEEE VNAHEAVRPTGIARTYPNLIGNEAARGTEYQAFGNDRNNANHVTILPFTRLIGGPMDYTP EECCHHCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEEEEEHHHHCCCCCCCC GIFEMDVTNGSHVNATIANQLALYVTMYSPLQMAADFPENYERFADAFQFIKDVAVDWDD CEEEEECCCCCEEEEEHHCCEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC SRYLEAEPGQYITVARKAKGTDNWFLGNVNGETARVSNIDLGFLEKGKKYTAVIYADAKD CCEEECCCCCEEEEEEECCCCCCEEEECCCCCEEEEECCCCHHHCCCCEEEEEEEECCCC ANYKTNTQAYTIRKVVVTSNSKLSQFSASGGGYAISFYPVADAAKKK CCCCCCCEEEEEEEEEEECCCCHHEEECCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA