| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302132
Identifier: 146302132
GI number: 146302132
Start: 5304168
End: 5304608
Strand: Direct
Name: 146302132
Synonym: Fjoh_4397
Alternate gene names: NA
Gene position: 5304168-5304608 (Clockwise)
Preceding gene: 146302131
Following gene: 146302133
Centisome position: 87.0
GC content: 34.92
Gene sequence:
>441_bases ATGAGTACTATAATAGGTATATGGAATGCAAGTGGCAAAGGGAAATCATCCTCCATTTTAAGTTTAGCCAACTTTTTAAT GAGTACTTATCAAAGTTATCGTGTCGTTCACTGCAATAAAAACCCATCGGCTCTAACTATTGATTTTAGACTAATTCTTG AAATAAAGGGTAAAATTTATGCTTTAGAAAGTATGGGTGACCCTAATTCGGGGTTAGAGCGTCGTTTAGATGACATTATG GTTACATATAAACCAGATGTACTCGTTTGTGCAACCCGTACTAGAGGGAATACGGTCCTTGCAGTGCAAAACATTAAGGC CAAATATTCATCAGATTTAATATGGTCATCGACCTATCAAACTTCCCATAGTCATACTCTTGTAAATGATGCTAAAGCAG AACATTTACATGACTTAATGCGTAAATTAAGCTTAATATAA
Upstream 100 bases:
>100_bases AAAAGCAAAGTGTATTCCAGAAAATTAGCTTCTTTGTCGACAAATTTAAAGGAGTTGGAGGGCAATTGTAAATGAAATTA CAAATAATAATTACAAACTA
Downstream 100 bases:
>100_bases TTACCGTCAATGTACCTATACAAAAACCAAAATAACCAAGTAAACAGCTTAAAAGAAAAACCATTTAAGCTTGAAAAAGA AATACAAAACTTGTTCGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSTIIGIWNASGKGKSSSILSLANFLMSTYQSYRVVHCNKNPSALTIDFRLILEIKGKIYALESMGDPNSGLERRLDDIM VTYKPDVLVCATRTRGNTVLAVQNIKAKYSSDLIWSSTYQTSHSHTLVNDAKAEHLHDLMRKLSLI
Sequences:
>Translated_146_residues MSTIIGIWNASGKGKSSSILSLANFLMSTYQSYRVVHCNKNPSALTIDFRLILEIKGKIYALESMGDPNSGLERRLDDIM VTYKPDVLVCATRTRGNTVLAVQNIKAKYSSDLIWSSTYQTSHSHTLVNDAKAEHLHDLMRKLSLI >Mature_145_residues STIIGIWNASGKGKSSSILSLANFLMSTYQSYRVVHCNKNPSALTIDFRLILEIKGKIYALESMGDPNSGLERRLDDIMV TYKPDVLVCATRTRGNTVLAVQNIKAKYSSDLIWSSTYQTSHSHTLVNDAKAEHLHDLMRKLSLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16305; Mature: 16174
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIIGIWNASGKGKSSSILSLANFLMSTYQSYRVVHCNKNPSALTIDFRLILEIKGKIY CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEEEEEEEECCEEE ALESMGDPNSGLERRLDDIMVTYKPDVLVCATRTRGNTVLAVQNIKAKYSSDLIWSSTYQ EEECCCCCCHHHHHHHHHEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEEECCCC TSHSHTLVNDAKAEHLHDLMRKLSLI CCCCCEECCCHHHHHHHHHHHHHCCC >Mature Secondary Structure STIIGIWNASGKGKSSSILSLANFLMSTYQSYRVVHCNKNPSALTIDFRLILEIKGKIY CEEEEEEECCCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEEEEEEEECCEEE ALESMGDPNSGLERRLDDIMVTYKPDVLVCATRTRGNTVLAVQNIKAKYSSDLIWSSTYQ EEECCCCCCHHHHHHHHHEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEEECCCC TSHSHTLVNDAKAEHLHDLMRKLSLI CCCCCEECCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA