| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302124
Identifier: 146302124
GI number: 146302124
Start: 5294182
End: 5294529
Strand: Direct
Name: 146302124
Synonym: Fjoh_4389
Alternate gene names: NA
Gene position: 5294182-5294529 (Clockwise)
Preceding gene: 146302123
Following gene: 146302125
Centisome position: 86.83
GC content: 30.17
Gene sequence:
>348_bases ATGGCGTTAGAATTTGAAAACGAAATTGAAATTATTGAAGTAATGGAAGGCTACTTAATAAATTCTCGTCCACCAGAGGA AGTTAGAAACCAAGTTGACATCAATTATAAAATAGAAAGTCAAAGCATTATTATTTTTGAAATTCGTCCCGTTTGGGACA ATCCAAGCGAAAAAATGGAGTATAATGTAGCAAAAGCAACGTTTGTGAAAACCGAGAACAAATGGAAAGTATATTGGTTT AAGTCTGATATGAAATGGCATACTTACAAACCAAATGAAAAAGTAAATAACCTAAAAGAGTTTGTGAAAATTATTGAAGA AGATAAATATAATTGTTTTAGGGGTTAA
Upstream 100 bases:
>100_bases TTATGTGCTAGCTGATCGGTACGCCACAAAAGCTGAAAATAAACCTAAAATAAAAAATAGCATGATACTTTTCAAAGTAG AAGCTTAAAAACGAAAAATA
Downstream 100 bases:
>100_bases ACAAGAACTTTTATTAAACAGCCTGTCTTCGTTAGTATTGACAGCAGTGTATTTTGCACTTCTTGCCATTTCTAATGAAC TTTCTACATTAATTATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MALEFENEIEIIEVMEGYLINSRPPEEVRNQVDINYKIESQSIIIFEIRPVWDNPSEKMEYNVAKATFVKTENKWKVYWF KSDMKWHTYKPNEKVNNLKEFVKIIEEDKYNCFRG
Sequences:
>Translated_115_residues MALEFENEIEIIEVMEGYLINSRPPEEVRNQVDINYKIESQSIIIFEIRPVWDNPSEKMEYNVAKATFVKTENKWKVYWF KSDMKWHTYKPNEKVNNLKEFVKIIEEDKYNCFRG >Mature_114_residues ALEFENEIEIIEVMEGYLINSRPPEEVRNQVDINYKIESQSIIIFEIRPVWDNPSEKMEYNVAKATFVKTENKWKVYWFK SDMKWHTYKPNEKVNNLKEFVKIIEEDKYNCFRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13989; Mature: 13858
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALEFENEIEIIEVMEGYLINSRPPEEVRNQVDINYKIESQSIIIFEIRPVWDNPSEKME CCCCCCCCCCEEEECCCEEECCCCHHHHHCEECCEEEECCCEEEEEEEEECCCCCCHHEE YNVAKATFVKTENKWKVYWFKSDMKWHTYKPNEKVNNLKEFVKIIEEDKYNCFRG EEEEEEEEEEECCCEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ALEFENEIEIIEVMEGYLINSRPPEEVRNQVDINYKIESQSIIIFEIRPVWDNPSEKME CCCCCCCCCEEEECCCEEECCCCHHHHHCEECCEEEECCCEEEEEEEEECCCCCCHHEE YNVAKATFVKTENKWKVYWFKSDMKWHTYKPNEKVNNLKEFVKIIEEDKYNCFRG EEEEEEEEEEECCCEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA