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The map label for this gene is 146302107

Identifier: 146302107

GI number: 146302107

Start: 5274970

End: 5275233

Strand: Reverse

Name: 146302107

Synonym: Fjoh_4372

Alternate gene names: NA

Gene position: 5275233-5274970 (Counterclockwise)

Preceding gene: 146302111

Following gene: 146302106

Centisome position: 86.52

GC content: 28.41

Gene sequence:

>264_bases
ATGAAATTAAACAGATTAAAAAAAGTCTTTGACGATCAGAAAATTAAGAACCGAGTAATTGCTAAATATTTAGGGAAATC
TGAATCGACTATATCTTTATGGCGTAATAATAAAAGACAACCGAACCTTGAGGAATTTTATCAAATAGCGAAACTTTTGC
GTGTAAATATACATAGCTTGATAGAACCTACTAATTGGAAAGAAGAAACCTCAGAAACTTATGAAGATTTTGCTAAGAGG
TATATAGAAAAAAACAATAATTAA

Upstream 100 bases:

>100_bases
TTATTAGACTTAATTAAAATTTTATGTCGCAAAATTATAAATACAAATATATAAAAGTTTTACGTTAAACGCAAAACTTT
TGAAAATAAATTTTTTAAGA

Downstream 100 bases:

>100_bases
AGTTCAAATTATATTTGTACAATTGAAATTAGATCAAATATTTATTGCAAATAAATATCTATAAATTTGATATGTAATAA
TAGAGAAAAAGAACTAAAGG

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKLNRLKKVFDDQKIKNRVIAKYLGKSESTISLWRNNKRQPNLEEFYQIAKLLRVNIHSLIEPTNWKEETSETYEDFAKR
YIEKNNN

Sequences:

>Translated_87_residues
MKLNRLKKVFDDQKIKNRVIAKYLGKSESTISLWRNNKRQPNLEEFYQIAKLLRVNIHSLIEPTNWKEETSETYEDFAKR
YIEKNNN
>Mature_87_residues
MKLNRLKKVFDDQKIKNRVIAKYLGKSESTISLWRNNKRQPNLEEFYQIAKLLRVNIHSLIEPTNWKEETSETYEDFAKR
YIEKNNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10560; Mature: 10560

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNRLKKVFDDQKIKNRVIAKYLGKSESTISLWRNNKRQPNLEEFYQIAKLLRVNIHSL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
IEPTNWKEETSETYEDFAKRYIEKNNN
HCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKLNRLKKVFDDQKIKNRVIAKYLGKSESTISLWRNNKRQPNLEEFYQIAKLLRVNIHSL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
IEPTNWKEETSETYEDFAKRYIEKNNN
HCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA