| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302105
Identifier: 146302105
GI number: 146302105
Start: 5273324
End: 5274121
Strand: Reverse
Name: 146302105
Synonym: Fjoh_4370
Alternate gene names: NA
Gene position: 5274121-5273324 (Counterclockwise)
Preceding gene: 146302106
Following gene: 146302103
Centisome position: 86.51
GC content: 24.06
Gene sequence:
>798_bases ATGTCGTTCAAAAAAGAAATTCCAGACGATTTAACTAAGCAACAAAAAGAACAACTTGTTGCATACATTGGATATTCTGA CTCTGATTGGTGTTTAGTCGGTCAATACGAAAATGCAATAGACATGTTAGTAAATCAAATCATTGAAGAAAAATCTAGAG TTGATCTTATTGCACATCCTCTACTTTATCTTATTAGGCACTCAATAGAATTAGCACTAAAAGAAAATATAAAATATTTA AACAAATACAGTAAAATAGGTATTGAGAAAGATTTTAAAAACCATAAATTAAGTGGTTTATTTTCTGTTTTTGAAAAGCA TTATGATAAAATTGCAACAAATCAAAATTTCAAAGCTGAATTAAGTTCAGATTACGAGAAATATACAAATGATTTAAAAA ATTTAATTGAGTTTCTTGGTGAAGACCAAAGTTCTTTTAGATACACATTTACACATAAAAACAATGCAATTTTTAATCAT ACGGATAAATTAAATATCATTGAGGTAAAAAAAATATATGATAATTCGCTAAAATTTTTGACTTTTACAGCTGATGTAAT TTCACCATTTACAAATTATGCAGATTATATAGAAACTGATAAGTCTATAATAAATGATAGTTTAGGATTTGTTCTATATG TTTTTGATAATCATAAAAAAAATTGGTTAATCGAAAAACTGAATGAAAAGTTTAAAATAATTACAGGTAAAAATGTTTGG TTTGATGAAAAAGAAAATTATTTTTTGCACTTAAAAAATAAAGATAAAAAATGTTATGTTATACCAATGAACAAATAA
Upstream 100 bases:
>100_bases TTTAGAATTGTTTAAAATGGATTCTTTATATAATGGAGGATATATAAATGTTTATGACATAAAACTTACAAACGCAATGT TTTCAAGTGATTTTTAAAAT
Downstream 100 bases:
>100_bases AAACTGCCACCAACAGCCGTTACACGAGATTTGGGTATTTGGCTGAATTTAAAAATTGGTTTGTATTTGGAAAATTTGTG TTTAACCGAAAGATTACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MSFKKEIPDDLTKQQKEQLVAYIGYSDSDWCLVGQYENAIDMLVNQIIEEKSRVDLIAHPLLYLIRHSIELALKENIKYL NKYSKIGIEKDFKNHKLSGLFSVFEKHYDKIATNQNFKAELSSDYEKYTNDLKNLIEFLGEDQSSFRYTFTHKNNAIFNH TDKLNIIEVKKIYDNSLKFLTFTADVISPFTNYADYIETDKSIINDSLGFVLYVFDNHKKNWLIEKLNEKFKIITGKNVW FDEKENYFLHLKNKDKKCYVIPMNK
Sequences:
>Translated_265_residues MSFKKEIPDDLTKQQKEQLVAYIGYSDSDWCLVGQYENAIDMLVNQIIEEKSRVDLIAHPLLYLIRHSIELALKENIKYL NKYSKIGIEKDFKNHKLSGLFSVFEKHYDKIATNQNFKAELSSDYEKYTNDLKNLIEFLGEDQSSFRYTFTHKNNAIFNH TDKLNIIEVKKIYDNSLKFLTFTADVISPFTNYADYIETDKSIINDSLGFVLYVFDNHKKNWLIEKLNEKFKIITGKNVW FDEKENYFLHLKNKDKKCYVIPMNK >Mature_264_residues SFKKEIPDDLTKQQKEQLVAYIGYSDSDWCLVGQYENAIDMLVNQIIEEKSRVDLIAHPLLYLIRHSIELALKENIKYLN KYSKIGIEKDFKNHKLSGLFSVFEKHYDKIATNQNFKAELSSDYEKYTNDLKNLIEFLGEDQSSFRYTFTHKNNAIFNHT DKLNIIEVKKIYDNSLKFLTFTADVISPFTNYADYIETDKSIINDSLGFVLYVFDNHKKNWLIEKLNEKFKIITGKNVWF DEKENYFLHLKNKDKKCYVIPMNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31412; Mature: 31281
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFKKEIPDDLTKQQKEQLVAYIGYSDSDWCLVGQYENAIDMLVNQIIEEKSRVDLIAHP CCCCCCCCHHHHHHHHHHEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH LLYLIRHSIELALKENIKYLNKYSKIGIEKDFKNHKLSGLFSVFEKHYDKIATNQNFKAE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH LSSDYEKYTNDLKNLIEFLGEDQSSFRYTFTHKNNAIFNHTDKLNIIEVKKIYDNSLKFL HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEECCCCCCEEEEEEEHHCCCCEEE TFTADVISPFTNYADYIETDKSIINDSLGFVLYVFDNHKKNWLIEKLNEKFKIITGKNVW EEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCCCEEEEECCCCE FDEKENYFLHLKNKDKKCYVIPMNK EECCCCEEEEEECCCCEEEEEECCC >Mature Secondary Structure SFKKEIPDDLTKQQKEQLVAYIGYSDSDWCLVGQYENAIDMLVNQIIEEKSRVDLIAHP CCCCCCCHHHHHHHHHHEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH LLYLIRHSIELALKENIKYLNKYSKIGIEKDFKNHKLSGLFSVFEKHYDKIATNQNFKAE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH LSSDYEKYTNDLKNLIEFLGEDQSSFRYTFTHKNNAIFNHTDKLNIIEVKKIYDNSLKFL HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEECCCCCCEEEEEEEHHCCCCEEE TFTADVISPFTNYADYIETDKSIINDSLGFVLYVFDNHKKNWLIEKLNEKFKIITGKNVW EEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCCCEEEEECCCCE FDEKENYFLHLKNKDKKCYVIPMNK EECCCCEEEEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA