| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146302104
Identifier: 146302104
GI number: 146302104
Start: 5271895
End: 5273124
Strand: Direct
Name: 146302104
Synonym: Fjoh_4369
Alternate gene names: NA
Gene position: 5271895-5273124 (Clockwise)
Preceding gene: 146302100
Following gene: 146302108
Centisome position: 86.47
GC content: 30.89
Gene sequence:
>1230_bases ATGAACAATTCAAGAGGCTTATTATATCCTGCACTGCATAAATTTTATAGTGCCTTAAGCAGTTTAGAAAAATTTAAAAA AGGAACAAACTTCTTCGACAATATAAGTTTTTTGGATAATTTTTTTTCAGAGTATAGGAATGTCACTTTTGTGCTTCAAA AGTCTTTGGCTAAAACACAATTCATGCCTACTTACGAAGAGTTACGCGATCAATATCTAGTTAATAATTTCGGTAAATGG TTTGTCGAAAAACGTAACGAGGTAATTAAACAACAACCTTTTGATCTAGAAAAGCGGATTGTTATTAGTATCTATTCTGG TCAGATTCCGTTGTCATTACCTGAATTAATTTTTACCATTGATAATGATGTAGAAATTTCAACTATAGTTGAGTCGTTGC GGACAACATTTATGAACTCCGGTCAATTGGAAGTGATGTTTTCGGCAGAGTTTTTATTTTTTGAGTATGGTCATAGTGAA GATTTATATGATAATTTGATTTTGGGAATAAATCAAATGAAACTCTTCTTAGCTGAGATGAAAAAGGCAATCAATGAAGA TTGTAAATTATCCGATGAACTCGAAAGGAAAATAGATAAGATGAATTTCTATCAGGTGCCTAAAGATATGCTCTTCGTTG ATGACTACGTATTTTACTGTAAAAAAGAATATTTTGAAAAAGCTTCTCGAGTTGCTCTGCAGTCTGGTTCAGGTCAGATT AGAGTTCCAATTGAGAATCTAAATGAAATGTATCCTAACGGCGACTTATTTAGTAAATTTGAACTTATGCATGTGGTGAT TTTCCAAATGGGAAAATCGCTATTACCGACTTACCTGATATTATATAGTGATGATACGTTTGAATTAGTTACTTTCGGAT TCTCGATCAAAACTACTGTATACAGAAAATTTAATGAAATTGCGAGACGAATTGAAGCAGATAAAATAGTTAATGTCCTT TTCGTTACAGAAATGTATATTTACGATTTAGATGAAGTAAGTAAACTGGACAGTCGTGAAAGGATAGAACATGCTAAAAA CGAGATATTAGCATTTTATATGATTGATAAACATTTAGCAATTAAATCACATTCATATGACACAAAGCAAATTAATGATT TTAAATATATTAGTTCGATAATGTTTTCAAAATCGAGCGAGCGAGTATTACCAAGATATATGAATCCGGTTATGCAAGAG TTTATACGTTTGAAAACAAATTTAAAATAA
Upstream 100 bases:
>100_bases TGGCGTACTTTATCAACCTAAACTTTTCCAAAGCACAAATGCATACATAATAGATATTAGATTCGTTTTTTCATATCTTT AATTTTTAATACAAGATAAA
Downstream 100 bases:
>100_bases GTTTAAGGTAAGTTATAATGTTCTCAATTGTTGAATTTACCGGGATTGTCTAGTATGCCACATAACGTTCTGGCGCTACA CGAGGTTTGGGATTAAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MNNSRGLLYPALHKFYSALSSLEKFKKGTNFFDNISFLDNFFSEYRNVTFVLQKSLAKTQFMPTYEELRDQYLVNNFGKW FVEKRNEVIKQQPFDLEKRIVISIYSGQIPLSLPELIFTIDNDVEISTIVESLRTTFMNSGQLEVMFSAEFLFFEYGHSE DLYDNLILGINQMKLFLAEMKKAINEDCKLSDELERKIDKMNFYQVPKDMLFVDDYVFYCKKEYFEKASRVALQSGSGQI RVPIENLNEMYPNGDLFSKFELMHVVIFQMGKSLLPTYLILYSDDTFELVTFGFSIKTTVYRKFNEIARRIEADKIVNVL FVTEMYIYDLDEVSKLDSRERIEHAKNEILAFYMIDKHLAIKSHSYDTKQINDFKYISSIMFSKSSERVLPRYMNPVMQE FIRLKTNLK
Sequences:
>Translated_409_residues MNNSRGLLYPALHKFYSALSSLEKFKKGTNFFDNISFLDNFFSEYRNVTFVLQKSLAKTQFMPTYEELRDQYLVNNFGKW FVEKRNEVIKQQPFDLEKRIVISIYSGQIPLSLPELIFTIDNDVEISTIVESLRTTFMNSGQLEVMFSAEFLFFEYGHSE DLYDNLILGINQMKLFLAEMKKAINEDCKLSDELERKIDKMNFYQVPKDMLFVDDYVFYCKKEYFEKASRVALQSGSGQI RVPIENLNEMYPNGDLFSKFELMHVVIFQMGKSLLPTYLILYSDDTFELVTFGFSIKTTVYRKFNEIARRIEADKIVNVL FVTEMYIYDLDEVSKLDSRERIEHAKNEILAFYMIDKHLAIKSHSYDTKQINDFKYISSIMFSKSSERVLPRYMNPVMQE FIRLKTNLK >Mature_409_residues MNNSRGLLYPALHKFYSALSSLEKFKKGTNFFDNISFLDNFFSEYRNVTFVLQKSLAKTQFMPTYEELRDQYLVNNFGKW FVEKRNEVIKQQPFDLEKRIVISIYSGQIPLSLPELIFTIDNDVEISTIVESLRTTFMNSGQLEVMFSAEFLFFEYGHSE DLYDNLILGINQMKLFLAEMKKAINEDCKLSDELERKIDKMNFYQVPKDMLFVDDYVFYCKKEYFEKASRVALQSGSGQI RVPIENLNEMYPNGDLFSKFELMHVVIFQMGKSLLPTYLILYSDDTFELVTFGFSIKTTVYRKFNEIARRIEADKIVNVL FVTEMYIYDLDEVSKLDSRERIEHAKNEILAFYMIDKHLAIKSHSYDTKQINDFKYISSIMFSKSSERVLPRYMNPVMQE FIRLKTNLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48363; Mature: 48363
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNSRGLLYPALHKFYSALSSLEKFKKGTNFFDNISFLDNFFSEYRNVTFVLQKSLAKTQ CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH FMPTYEELRDQYLVNNFGKWFVEKRNEVIKQQPFDLEKRIVISIYSGQIPLSLPELIFTI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHEEEC DNDVEISTIVESLRTTFMNSGQLEVMFSAEFLFFEYGHSEDLYDNLILGINQMKLFLAEM CCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH KKAINEDCKLSDELERKIDKMNFYQVPKDMLFVDDYVFYCKKEYFEKASRVALQSGSGQI HHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE RVPIENLNEMYPNGDLFSKFELMHVVIFQMGKSLLPTYLILYSDDTFELVTFGFSIKTTV EEEHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHCCEEEEEECCCCEEEEEECCHHHHHH YRKFNEIARRIEADKIVNVLFVTEMYIYDLDEVSKLDSRERIEHAKNEILAFYMIDKHLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHEEEEEEEEHHHE IKSHSYDTKQINDFKYISSIMFSKSSERVLPRYMNPVMQEFIRLKTNLK ECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNNSRGLLYPALHKFYSALSSLEKFKKGTNFFDNISFLDNFFSEYRNVTFVLQKSLAKTQ CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH FMPTYEELRDQYLVNNFGKWFVEKRNEVIKQQPFDLEKRIVISIYSGQIPLSLPELIFTI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHEEEC DNDVEISTIVESLRTTFMNSGQLEVMFSAEFLFFEYGHSEDLYDNLILGINQMKLFLAEM CCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH KKAINEDCKLSDELERKIDKMNFYQVPKDMLFVDDYVFYCKKEYFEKASRVALQSGSGQI HHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE RVPIENLNEMYPNGDLFSKFELMHVVIFQMGKSLLPTYLILYSDDTFELVTFGFSIKTTV EEEHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHCCEEEEEECCCCEEEEEECCHHHHHH YRKFNEIARRIEADKIVNVLFVTEMYIYDLDEVSKLDSRERIEHAKNEILAFYMIDKHLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHEEEEEEEEHHHE IKSHSYDTKQINDFKYISSIMFSKSSERVLPRYMNPVMQEFIRLKTNLK ECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA