| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302086
Identifier: 146302086
GI number: 146302086
Start: 5254544
End: 5255833
Strand: Reverse
Name: 146302086
Synonym: Fjoh_4351
Alternate gene names: NA
Gene position: 5255833-5254544 (Counterclockwise)
Preceding gene: 146302087
Following gene: 146302085
Centisome position: 86.21
GC content: 41.32
Gene sequence:
>1290_bases ATGCAAGAGAAAACATTATCTCCAAAGGAATCTAAAAAGAGAAAGATGCTTTTAATGCTGCCTCTTATAACATTTCCATT TCTCACATTCTTATTTTATTCATTAGGCGGCGGAAGAATGGAATCCAAGATGGCAGGGAACGACGAAAGGAAAGGATTCA ATTTTCATCTGCCACTGCCTAAATTTAAAGAAGATTCAGCACTGGATAAGATGAGCTATTACGATCAGGCAGCAGTTGAT TCGATAAAACTGCGAGAGCAGATAAAAAAAGATCCTAACTATATTGATAATAAAGTCTCGGAAGATAAAGCAGATTCTTT TTCCACAAGTGATTTTGAATCCCGCATGCTTCCAAAAAACAGATCAGCTTTTAATTCTCAGTCTTTTCAGGACCGCAATG AACAGAAAGTTTATGAGAAGCTGAGGGCTCTTGAAAACATAATCAGCCAGCCAGCTGTCCCTGCTTACGGTCAGGACATG AGGGAATTTGAAAATTACGGCACTTCTCGTGGAGAATCGGAAGAGATTAAAAAACTTGAAGGGCTAATGTCGACGATGAG CACGACCCAGGAACCTGATCCGGAACTTCAGCAGTTAGGCGGTATGCTGGAAAATATTTTGGATATACAGCATCCGCAGC GCGTGCAGGAAAGGCTTAGACAAACATCTGAGAGCAAAAAAGGCAAAATATATTCAGTGCAGAAAAAAGAAGCAGAGAAT AACATAAGCTCACTTCAGCGGAATGCCGATTGGCAGACCTCTTTGAAAACAAATGAATTTTATTCTCTGGACGAAGCAGA GCCTGCTGAAGAAATACAAAATTCTATTGAAGCAGTTGTGCACCAGACGCAGACTATTGTCAATGGCTCGGTGGTTAAAT TAAGACTCACGAATGATATTTTTCTCCAAGGAACAATTATACCCAGAAATGCTTTTCTGTATGGTATGGCGGCTTTAAAA GGAGAGAGGCTGGAGGTAAAAATCACAAACATCCAGTACAATAATTCGATATTTCCCGTCGAGCTGGCTGTCTATGATAT GGACGGGATTGACGGCATCTATATTCCCGGAGCGATTAACAGGGATGTGGCTAAGGCATCAGCTGACAGATCCATTCAGA CACTCGGTCTTACCGGGATTTCGGATTCATGGGGTGCACAGGCCGCAGGTATGGGTATCGAGGCTGCTAAAAGTCTGATG AGCAAAAAGGTAAAACTCATAAAAGTGGTTGTAAAGGCAGGGTATCAGGTGCTGCTGTATGATGAAAAACAAAAGAATTT AAAACCTTAA
Upstream 100 bases:
>100_bases TCGGGTTATTTAATTTATAACCTGTATAGGACATTTTATAAACAAGCTGAGGTTTCAACAGCTTCAAAAATTAAGACAAT CAATTTAAAAAACTAAAATT
Downstream 100 bases:
>100_bases AAGAGAGAAAATATGAAAAGAGCGAATTATTTGTTTTTAATCAGCTTGCTGCTGGTTTGTGTTTCAGTTAATCCACAGTC AAACGCAAGGGAAACTGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MQEKTLSPKESKKRKMLLMLPLITFPFLTFLFYSLGGGRMESKMAGNDERKGFNFHLPLPKFKEDSALDKMSYYDQAAVD SIKLREQIKKDPNYIDNKVSEDKADSFSTSDFESRMLPKNRSAFNSQSFQDRNEQKVYEKLRALENIISQPAVPAYGQDM REFENYGTSRGESEEIKKLEGLMSTMSTTQEPDPELQQLGGMLENILDIQHPQRVQERLRQTSESKKGKIYSVQKKEAEN NISSLQRNADWQTSLKTNEFYSLDEAEPAEEIQNSIEAVVHQTQTIVNGSVVKLRLTNDIFLQGTIIPRNAFLYGMAALK GERLEVKITNIQYNNSIFPVELAVYDMDGIDGIYIPGAINRDVAKASADRSIQTLGLTGISDSWGAQAAGMGIEAAKSLM SKKVKLIKVVVKAGYQVLLYDEKQKNLKP
Sequences:
>Translated_429_residues MQEKTLSPKESKKRKMLLMLPLITFPFLTFLFYSLGGGRMESKMAGNDERKGFNFHLPLPKFKEDSALDKMSYYDQAAVD SIKLREQIKKDPNYIDNKVSEDKADSFSTSDFESRMLPKNRSAFNSQSFQDRNEQKVYEKLRALENIISQPAVPAYGQDM REFENYGTSRGESEEIKKLEGLMSTMSTTQEPDPELQQLGGMLENILDIQHPQRVQERLRQTSESKKGKIYSVQKKEAEN NISSLQRNADWQTSLKTNEFYSLDEAEPAEEIQNSIEAVVHQTQTIVNGSVVKLRLTNDIFLQGTIIPRNAFLYGMAALK GERLEVKITNIQYNNSIFPVELAVYDMDGIDGIYIPGAINRDVAKASADRSIQTLGLTGISDSWGAQAAGMGIEAAKSLM SKKVKLIKVVVKAGYQVLLYDEKQKNLKP >Mature_429_residues MQEKTLSPKESKKRKMLLMLPLITFPFLTFLFYSLGGGRMESKMAGNDERKGFNFHLPLPKFKEDSALDKMSYYDQAAVD SIKLREQIKKDPNYIDNKVSEDKADSFSTSDFESRMLPKNRSAFNSQSFQDRNEQKVYEKLRALENIISQPAVPAYGQDM REFENYGTSRGESEEIKKLEGLMSTMSTTQEPDPELQQLGGMLENILDIQHPQRVQERLRQTSESKKGKIYSVQKKEAEN NISSLQRNADWQTSLKTNEFYSLDEAEPAEEIQNSIEAVVHQTQTIVNGSVVKLRLTNDIFLQGTIIPRNAFLYGMAALK GERLEVKITNIQYNNSIFPVELAVYDMDGIDGIYIPGAINRDVAKASADRSIQTLGLTGISDSWGAQAAGMGIEAAKSLM SKKVKLIKVVVKAGYQVLLYDEKQKNLKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48491; Mature: 48491
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEKTLSPKESKKRKMLLMLPLITFPFLTFLFYSLGGGRMESKMAGNDERKGFNFHLPLP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEECCCC KFKEDSALDKMSYYDQAAVDSIKLREQIKKDPNYIDNKVSEDKADSFSTSDFESRMLPKN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHHHCCCCC RSAFNSQSFQDRNEQKVYEKLRALENIISQPAVPAYGQDMREFENYGTSRGESEEIKKLE CCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH GLMSTMSTTQEPDPELQQLGGMLENILDIQHPQRVQERLRQTSESKKGKIYSVQKKEAEN HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHH NISSLQRNADWQTSLKTNEFYSLDEAEPAEEIQNSIEAVVHQTQTIVNGSVVKLRLTNDI HHHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCE FLQGTIIPRNAFLYGMAALKGERLEVKITNIQYNNSIFPVELAVYDMDGIDGIYIPGAIN EEEEEEECCHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEEEEEEECCCCCCEEECCCCC RDVAKASADRSIQTLGLTGISDSWGAQAAGMGIEAAKSLMSKKVKLIKVVVKAGYQVLLY HHHHHHHHCCCEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE DEKQKNLKP ECHHCCCCC >Mature Secondary Structure MQEKTLSPKESKKRKMLLMLPLITFPFLTFLFYSLGGGRMESKMAGNDERKGFNFHLPLP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEECCCC KFKEDSALDKMSYYDQAAVDSIKLREQIKKDPNYIDNKVSEDKADSFSTSDFESRMLPKN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHHHCCCCC RSAFNSQSFQDRNEQKVYEKLRALENIISQPAVPAYGQDMREFENYGTSRGESEEIKKLE CCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH GLMSTMSTTQEPDPELQQLGGMLENILDIQHPQRVQERLRQTSESKKGKIYSVQKKEAEN HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHH NISSLQRNADWQTSLKTNEFYSLDEAEPAEEIQNSIEAVVHQTQTIVNGSVVKLRLTNDI HHHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCE FLQGTIIPRNAFLYGMAALKGERLEVKITNIQYNNSIFPVELAVYDMDGIDGIYIPGAIN EEEEEEECCHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEEEEEEECCCCCCEEECCCCC RDVAKASADRSIQTLGLTGISDSWGAQAAGMGIEAAKSLMSKKVKLIKVVVKAGYQVLLY HHHHHHHHCCCEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE DEKQKNLKP ECHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA