| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302078
Identifier: 146302078
GI number: 146302078
Start: 5246067
End: 5246507
Strand: Direct
Name: 146302078
Synonym: Fjoh_4342
Alternate gene names: NA
Gene position: 5246067-5246507 (Clockwise)
Preceding gene: 146302077
Following gene: 146302079
Centisome position: 86.05
GC content: 30.61
Gene sequence:
>441_bases ATGAAAAAAATAGTTGAATACCGCAAGTTACTAAACGTAGAGAAAACTGCAGAATTAAAAGATTTAAAAACAATTTATCG TAATGCGATGAAAGAATCTCATCCTGATAAATTTGTTGGAGATGAAGCTGGTCTTAAAGCTGCAGAAGAAAAAAGTAAAA CGATTATCGAAGCTTACCACTTTTTAGTAAGTATTCACCCTGATACTATCAAACTTAATTTACCTGAGTACACAGAAACA ATTTCAACTTGTTCTATTACTGATTTTAAATTTGTAGAAGGACGTTTGATTATTGATTTTTCTAATGGAAGTGTTTACGA ATACATTAGTGTTCCTAAAGCAACTTACGTGAAAATGGTAAATGCTGATTCTCCTGCAAGGTTTGCAAAAAGACATATCT TAAATGCTTTTACCTGGAGAAAGAAAACAAATCAAGAATAA
Upstream 100 bases:
>100_bases ACTGAAAAGTTAAAAAAAAGTGTACCTTTGCAAAAAATTTGTCGATTTGAACTAAAAAAGATCAATTTCAAACTAATAGA CAAGTAGTTACCTTTTATTT
Downstream 100 bases:
>100_bases TTTTATTCAAAAATATTTCAGAAAGCACTCTTTTTACAGAGTGCTTTTTTTATACTTTATTATTATAAAAATCCTATCTT CACGTTAGAAACAAAAATCA
Product: heat shock protein DnaJ domain-containing protein
Products: NA
Alternate protein names: Heat Shock Protein DNAj Domain Protein; Chaperone Protein DNAJ; DNAJ-Like Protein; Heat Shock Protein DNAJ Domain Protein; Heat Shock Protein DNAJ Domain-Containing Protein; DNAJ-Class Molecular Chaperone
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MKKIVEYRKLLNVEKTAELKDLKTIYRNAMKESHPDKFVGDEAGLKAAEEKSKTIIEAYHFLVSIHPDTIKLNLPEYTET ISTCSITDFKFVEGRLIIDFSNGSVYEYISVPKATYVKMVNADSPARFAKRHILNAFTWRKKTNQE
Sequences:
>Translated_146_residues MKKIVEYRKLLNVEKTAELKDLKTIYRNAMKESHPDKFVGDEAGLKAAEEKSKTIIEAYHFLVSIHPDTIKLNLPEYTET ISTCSITDFKFVEGRLIIDFSNGSVYEYISVPKATYVKMVNADSPARFAKRHILNAFTWRKKTNQE >Mature_146_residues MKKIVEYRKLLNVEKTAELKDLKTIYRNAMKESHPDKFVGDEAGLKAAEEKSKTIIEAYHFLVSIHPDTIKLNLPEYTET ISTCSITDFKFVEGRLIIDFSNGSVYEYISVPKATYVKMVNADSPARFAKRHILNAFTWRKKTNQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16851; Mature: 16851
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIVEYRKLLNVEKTAELKDLKTIYRNAMKESHPDKFVGDEAGLKAAEEKSKTIIEAYH CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHH FLVSIHPDTIKLNLPEYTETISTCSITDFKFVEGRLIIDFSNGSVYEYISVPKATYVKMV HHHEECCCEEEEECCHHHHHHHHCCCCCEEEECCEEEEEECCCCEEEEECCCCCCEEEEE NADSPARFAKRHILNAFTWRKKTNQE CCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKKIVEYRKLLNVEKTAELKDLKTIYRNAMKESHPDKFVGDEAGLKAAEEKSKTIIEAYH CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHH FLVSIHPDTIKLNLPEYTETISTCSITDFKFVEGRLIIDFSNGSVYEYISVPKATYVKMV HHHEECCCEEEEECCHHHHHHHHCCCCCEEEECCEEEEEECCCCEEEEECCCCCCEEEEE NADSPARFAKRHILNAFTWRKKTNQE CCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA