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The map label for this gene is ychJ [C]

Identifier: 146302074

GI number: 146302074

Start: 5244156

End: 5244536

Strand: Reverse

Name: ychJ [C]

Synonym: Fjoh_4338

Alternate gene names: 146302074

Gene position: 5244536-5244156 (Counterclockwise)

Preceding gene: 146302075

Following gene: 146302073

Centisome position: 86.02

GC content: 31.23

Gene sequence:

>381_bases
ATGGAGAATAAAATCTGCTTTTGTGACACAGGATTACTTTTTGAAAATTGCTGCGGATTATATCTCCAAAAGAATCAAAA
AGCACCAGCAGCTTTGGCCTTAATGCGTTCCAGATATTCTGCTTATGCTAGCCATAATGCTGATTATCTTATAGAAACGA
CCTATATTTCTGAAAGAAAATATTATTCTAAAACAGAAATTTTAAGATGGGCACAAGAAAATAAATGGCAGAAACTGGAA
ATTTTGAGTTTTACCGAAAATACAGTTGAGTTTAAAGCTTATTTTTTAGATTCTGATCAAAAACCTCAAATACATTACGA
ATTTTCTACTTTTAAATTCGAAAATGGCGCTTGGTTTTATGTTGACGGAAAGTTTGAATAA

Upstream 100 bases:

>100_bases
ATTGATTTTGCTGAAGAAGATGAAGAAGTGAGAGAAATCAGCCGTTATCAGGTTTTATTAAATCAGCTTCACGTTAAAAT
TAATGGAGAAGAACCAGTCG

Downstream 100 bases:

>100_bases
TTATTATATCTAACACTGTTAGTAGTAGATTTTGGTTAAATATTTTAACTAAAAATTAATAAACGTTTCGTTTTTCATAA
TTCTAAAAAAACGTAATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MENKICFCDTGLLFENCCGLYLQKNQKAPAALALMRSRYSAYASHNADYLIETTYISERKYYSKTEILRWAQENKWQKLE
ILSFTENTVEFKAYFLDSDQKPQIHYEFSTFKFENGAWFYVDGKFE

Sequences:

>Translated_126_residues
MENKICFCDTGLLFENCCGLYLQKNQKAPAALALMRSRYSAYASHNADYLIETTYISERKYYSKTEILRWAQENKWQKLE
ILSFTENTVEFKAYFLDSDQKPQIHYEFSTFKFENGAWFYVDGKFE
>Mature_126_residues
MENKICFCDTGLLFENCCGLYLQKNQKAPAALALMRSRYSAYASHNADYLIETTYISERKYYSKTEILRWAQENKWQKLE
ILSFTENTVEFKAYFLDSDQKPQIHYEFSTFKFENGAWFYVDGKFE

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=127, Percent_Identity=31.496062992126, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 15016; Mature: 15016

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKICFCDTGLLFENCCGLYLQKNQKAPAALALMRSRYSAYASHNADYLIETTYISERK
CCCCEEEEECCCHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCC
YYSKTEILRWAQENKWQKLEILSFTENTVEFKAYFLDSDQKPQIHYEFSTFKFENGAWFY
CCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEECCCCCCEEEEEEEEEEECCCEEEE
VDGKFE
EECCCC
>Mature Secondary Structure
MENKICFCDTGLLFENCCGLYLQKNQKAPAALALMRSRYSAYASHNADYLIETTYISERK
CCCCEEEEECCCHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCC
YYSKTEILRWAQENKWQKLEILSFTENTVEFKAYFLDSDQKPQIHYEFSTFKFENGAWFY
CCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEECCCCCCEEEEEEEEEEECCCEEEE
VDGKFE
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]