Click here to switch to the map view.

The map label for this gene is 146302047

Identifier: 146302047

GI number: 146302047

Start: 5206070

End: 5207149

Strand: Direct

Name: 146302047

Synonym: Fjoh_4311

Alternate gene names: NA

Gene position: 5206070-5207149 (Clockwise)

Preceding gene: 146302045

Following gene: 146302048

Centisome position: 85.39

GC content: 35.83

Gene sequence:

>1080_bases
ATGGAAGCAGTAACGACTCAAAACACTTTAGCGACAAAACTGGGTGTTATTTTAGAGAAAACAGACCGGTCTTTTGAGGA
ATTAGGTGTTTTAAATCCTGCCATATATCAAGATGGAAACAGCGTTCATATGTTTTACAGAGCTGCAAAAAGAGGAAATT
TTTCAACCATTGGATATTGCAGATTCGAGGGGCCGACAACGTTAGTTGAACGTCGCACTGAACCCATTTTTGTACCGGAA
TACATTTATGAAATTCACGGTGTAGAAGATCCCCGAATTACCAAAATTGATGATAAGTATTATATGACTTATGTTACTTA
CGATGGAATAAATGCCTGCGGAGCTGTAGCAGTATCAAAAGATTTGACATCGTTTAAAAAGAAAGGAATTATAACTCCAA
AATTCATTTTACACGAGTTCACCAATTTGATCCGCAAACATTTACAAAATCCAAGTGTTGCAAGTATATTGGCTTTTAAT
ACTGCCCGAAATTATCCTTTGAGCGAAACAATAAAGGAAAATTTATTAGTGTGGGACAAAAACGTCGTTCTATTTCCTAA
AAAAATAAATGGAAAATTTGTGGCTTTACACCGCTTATTTCCTTCAATTCAAATCGTTTCATTTGAAAAGAAAAAAGACC
TGACGGTAGATTTTTGGAAAGATTATCTTAAAAACCTGCCTGATTATATTGTAATGGAGCCCAAATTTGAACACGAAACA
AGTCATATTGGACCAGGCGCTCCGCCAATTGAAACAAAAGATGGATGGCTGTTGATTTATCACGCTGCCGAAAGACGCGA
AAAAGGTCTTGTTTATCATGCCTGTGCCGCTTTATTAGATCTAAATGATCCCAGTAAAGTGATTGGAAGATTAACAAAAC
CAATTATAACGCCATCAGAATATTATGAAAGACATGGTTATGTAAATTATGTAGTTTTTCCAACCGGAACTGCCATTTTT
GACGACCAATTATATATTTATTACGGTGCCGCCGATGATAAGATTGCGGTGGCTTCTCTGAACCTTAACGACTTATTAAC
CGAATTAAAATTGAACTCCCATGAAGAAGATATCAAATAA

Upstream 100 bases:

>100_bases
TATACAATTCCCATGTAAATGCTTTAGAGTTAATTTTTTGATCGATTGAGTTAATCGCCCCTCTGTTCCCAAGGTAATTT
TAACCTATAGAAATTTAGAT

Downstream 100 bases:

>100_bases
ATCGAAAATTGTTTTTCTTTCTACATTCCCTCCAACACAATGTGGAATCGCAACTTATACTCAAGATACCATTAAAGGAA
TTACCAATGTTTTTGGTAAA

Product: PH1107-like glycosidase

Products: NA

Alternate protein names: Glycosidase Related Protein; Glycosidase-Like Protein; Glycosylase; Conserved Domain Protein; Glycosidase-Related; Glycosidase-Related Protein; Cytoplasmic Protein; Glycosylase-Like Protein; Unknwon Conserved Protein

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MEAVTTQNTLATKLGVILEKTDRSFEELGVLNPAIYQDGNSVHMFYRAAKRGNFSTIGYCRFEGPTTLVERRTEPIFVPE
YIYEIHGVEDPRITKIDDKYYMTYVTYDGINACGAVAVSKDLTSFKKKGIITPKFILHEFTNLIRKHLQNPSVASILAFN
TARNYPLSETIKENLLVWDKNVVLFPKKINGKFVALHRLFPSIQIVSFEKKKDLTVDFWKDYLKNLPDYIVMEPKFEHET
SHIGPGAPPIETKDGWLLIYHAAERREKGLVYHACAALLDLNDPSKVIGRLTKPIITPSEYYERHGYVNYVVFPTGTAIF
DDQLYIYYGAADDKIAVASLNLNDLLTELKLNSHEEDIK

Sequences:

>Translated_359_residues
MEAVTTQNTLATKLGVILEKTDRSFEELGVLNPAIYQDGNSVHMFYRAAKRGNFSTIGYCRFEGPTTLVERRTEPIFVPE
YIYEIHGVEDPRITKIDDKYYMTYVTYDGINACGAVAVSKDLTSFKKKGIITPKFILHEFTNLIRKHLQNPSVASILAFN
TARNYPLSETIKENLLVWDKNVVLFPKKINGKFVALHRLFPSIQIVSFEKKKDLTVDFWKDYLKNLPDYIVMEPKFEHET
SHIGPGAPPIETKDGWLLIYHAAERREKGLVYHACAALLDLNDPSKVIGRLTKPIITPSEYYERHGYVNYVVFPTGTAIF
DDQLYIYYGAADDKIAVASLNLNDLLTELKLNSHEEDIK
>Mature_359_residues
MEAVTTQNTLATKLGVILEKTDRSFEELGVLNPAIYQDGNSVHMFYRAAKRGNFSTIGYCRFEGPTTLVERRTEPIFVPE
YIYEIHGVEDPRITKIDDKYYMTYVTYDGINACGAVAVSKDLTSFKKKGIITPKFILHEFTNLIRKHLQNPSVASILAFN
TARNYPLSETIKENLLVWDKNVVLFPKKINGKFVALHRLFPSIQIVSFEKKKDLTVDFWKDYLKNLPDYIVMEPKFEHET
SHIGPGAPPIETKDGWLLIYHAAERREKGLVYHACAALLDLNDPSKVIGRLTKPIITPSEYYERHGYVNYVVFPTGTAIF
DDQLYIYYGAADDKIAVASLNLNDLLTELKLNSHEEDIK

Specific function: Unknown

COG id: COG2152

COG function: function code G; Predicted glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40997; Mature: 40997

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAVTTQNTLATKLGVILEKTDRSFEELGVLNPAIYQDGNSVHMFYRAAKRGNFSTIGYC
CCCCCCCHHHHHHHHHHEECCCCCHHHHCCCCCHHCCCCCEEEEEEEECCCCCCCEEEEE
RFEGPTTLVERRTEPIFVPEYIYEIHGVEDPRITKIDDKYYMTYVTYDGINACGAVAVSK
EECCCHHHHHCCCCCEECHHHHHHHCCCCCCCEEEECCCEEEEEEEECCCCCHHHHHHHH
DLTSFKKKGIITPKFILHEFTNLIRKHLQNPSVASILAFNTARNYPLSETIKENLLVWDK
HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCHHHHHHHCEEEEEC
NVVLFPKKINGKFVALHRLFPSIQIVSFEKKKDLTVDFWKDYLKNLPDYIVMEPKFEHET
CEEEEEEECCCCEEEEEHHCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCC
SHIGPGAPPIETKDGWLLIYHAAERREKGLVYHACAALLDLNDPSKVIGRLTKPIITPSE
CCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHEEHHHHHCCCCHHHHHHHHHCCCCCCHH
YYERHGYVNYVVFPTGTAIFDDQLYIYYGAADDKIAVASLNLNDLLTELKLNSHEEDIK
HHHHCCEEEEEEEECCCEEECCEEEEEEECCCCEEEEEECCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEAVTTQNTLATKLGVILEKTDRSFEELGVLNPAIYQDGNSVHMFYRAAKRGNFSTIGYC
CCCCCCCHHHHHHHHHHEECCCCCHHHHCCCCCHHCCCCCEEEEEEEECCCCCCCEEEEE
RFEGPTTLVERRTEPIFVPEYIYEIHGVEDPRITKIDDKYYMTYVTYDGINACGAVAVSK
EECCCHHHHHCCCCCEECHHHHHHHCCCCCCCEEEECCCEEEEEEEECCCCCHHHHHHHH
DLTSFKKKGIITPKFILHEFTNLIRKHLQNPSVASILAFNTARNYPLSETIKENLLVWDK
HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCHHHHHHHCEEEEEC
NVVLFPKKINGKFVALHRLFPSIQIVSFEKKKDLTVDFWKDYLKNLPDYIVMEPKFEHET
CEEEEEEECCCCEEEEEHHCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCC
SHIGPGAPPIETKDGWLLIYHAAERREKGLVYHACAALLDLNDPSKVIGRLTKPIITPSE
CCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHEEHHHHHCCCCHHHHHHHHHCCCCCCHH
YYERHGYVNYVVFPTGTAIFDDQLYIYYGAADDKIAVASLNLNDLLTELKLNSHEEDIK
HHHHCCEEEEEEEECCCEEECCEEEEEEECCCCEEEEEECCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA