| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302038
Identifier: 146302038
GI number: 146302038
Start: 5201097
End: 5201558
Strand: Direct
Name: 146302038
Synonym: Fjoh_4302
Alternate gene names: NA
Gene position: 5201097-5201558 (Clockwise)
Preceding gene: 146302037
Following gene: 146302039
Centisome position: 85.31
GC content: 27.92
Gene sequence:
>462_bases ATGAAGAAAATAGCATGTATTGCGCTTTTAGCTTTACTATTTACAAATTGCAAGCAAAGCAATAATGAAGAATCAAAACC TATTGAAAAACCAGCAGATACAATTGCAGTTGTAAAAACAGAAAAAATAGAAAAAAAGACTGAGCCAAAAGAAGACTGTA AAGATATCGAAGTAGAAATGGGAGATGGCAGAGAATGTATTTTACAGGATTCTGATCTGGATAAAGTTTATCAAAATATT ATTAAAAACAAAGAAGTTGAAGAATCAAATTACTTTTTAAGTACGATTCCAAATGAAAACAAATCTGTTGAAGTAAATCA AAACGGTTTAATCTCAATTGATTATCAAATTACAAAAGATAAAGTTGCTATTTCTATGAATTATGAAGGCGGTGTAACTG AAGTAACCCTTGAAAAAATAAACAATACTGTTAAAAGAAGTATTTATCATTATGCTGATTAA
Upstream 100 bases:
>100_bases ATTTTTGTGAAAGAGTTTCGCATTAAGATTTTTCCTTCGTTTAAATGATAAACCTGGACTTATTTTGTTAATTTTGAATC CCATAATTAAAATTAAAAAA
Downstream 100 bases:
>100_bases GCAACGATACAAATAATTACAATTTAAAACCGCTGGAAGCTCTGAGTTTTTAGCGTTTTTTAAATTTTTGCTGCCAAGGC GCTAAGGCTCGAAGTATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MKKIACIALLALLFTNCKQSNNEESKPIEKPADTIAVVKTEKIEKKTEPKEDCKDIEVEMGDGRECILQDSDLDKVYQNI IKNKEVEESNYFLSTIPNENKSVEVNQNGLISIDYQITKDKVAISMNYEGGVTEVTLEKINNTVKRSIYHYAD
Sequences:
>Translated_153_residues MKKIACIALLALLFTNCKQSNNEESKPIEKPADTIAVVKTEKIEKKTEPKEDCKDIEVEMGDGRECILQDSDLDKVYQNI IKNKEVEESNYFLSTIPNENKSVEVNQNGLISIDYQITKDKVAISMNYEGGVTEVTLEKINNTVKRSIYHYAD >Mature_153_residues MKKIACIALLALLFTNCKQSNNEESKPIEKPADTIAVVKTEKIEKKTEPKEDCKDIEVEMGDGRECILQDSDLDKVYQNI IKNKEVEESNYFLSTIPNENKSVEVNQNGLISIDYQITKDKVAISMNYEGGVTEVTLEKINNTVKRSIYHYAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17366; Mature: 17366
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIACIALLALLFTNCKQSNNEESKPIEKPADTIAVVKTEKIEKKTEPKEDCKDIEVEM CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCCCCEEEEEE GDGRECILQDSDLDKVYQNIIKNKEVEESNYFLSTIPNENKSVEVNQNGLISIDYQITKD CCCCEEEEECCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEECCCCEEEEEEEEECC KVAISMNYEGGVTEVTLEKINNTVKRSIYHYAD EEEEEEECCCCCCEEHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKIACIALLALLFTNCKQSNNEESKPIEKPADTIAVVKTEKIEKKTEPKEDCKDIEVEM CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCCCCEEEEEE GDGRECILQDSDLDKVYQNIIKNKEVEESNYFLSTIPNENKSVEVNQNGLISIDYQITKD CCCCEEEEECCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEECCCCEEEEEEEEECC KVAISMNYEGGVTEVTLEKINNTVKRSIYHYAD EEEEEEECCCCCCEEHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA