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The map label for this gene is rhaT [H]

Identifier: 146301952

GI number: 146301952

Start: 5068181

End: 5069230

Strand: Reverse

Name: rhaT [H]

Synonym: Fjoh_4216

Alternate gene names: 146301952

Gene position: 5069230-5068181 (Counterclockwise)

Preceding gene: 146301955

Following gene: 146301951

Centisome position: 83.14

GC content: 34.48

Gene sequence:

>1050_bases
ATGGAATCATTATTAGGAATCATTTTTCATTCTATCGGAGGATTTTCTTCAGGTAGTTTTTATATGCCTTTTAAAAAAGT
TAAAGATTGGGCTTGGGAAAGTTACTGGCTTGTGGGCGGTTTCTTTTCTTGGTTAATTGTACCGCCGATTGCGGCTTATT
TAACGATTCCAAATTTTACAGAAATTATCATTGCCGCTTCACCTGCAATTAAATCCTTTACTTTTTTAATGGGATTAATT
TGGGGAATTGGCGGACTTACTTATGGTCTTGGCGTTCGCTACTTAGGAATGTCTTTAGGAAATTCAATTACATTAGGATT
TTGTTCTGCATTTGGAGCTTTAGTTCCTTCAATTTATTATGATATTGTTCCAACAGAAGGAAAAATTTCATTTACACACA
TGCTTTCTACTTCTGGCGGACAGCTGGTTTTATTTGGAGTTGTAGTATATCTTATAGGTATTGCTATTTCTGGAAAAGCT
GGAATGCTGAAAGAAAAGGATTTTGCAACAGGTCATGAAGATAAGGACAAAGACTTCAATTTGGTAAAAGGTTTAATTGT
AGCTGTAATTTCAGGAATTTTAAGTTCATTTTTTAATTACGGAATCGAAGCCGGAAAACCAATGGCAGAACATGCTATAG
TAAATGGTGCAAATCCGTTATTCCAAAACAACGTAACCTATGTTGTACTGCTTTGGGGAGGATTAACAACCAATTTTATC
TGGTGTCTTTATTTAAACTTTAAAAATAAAACAATTAAAAACTATACCGATAAATCTACTCCAATTACTAAAAACGTTTT
GTTTTCTGCACTTGCCGGAACGATGTGGTTTTTACAGTTTTTCTTTTACGGAATGGGAGAGAGCAAACTAGGGAATGGTG
CCAGTTCATGGATTCTGCACATGGCAACCATCATTTTAACTGCAAACTTTTGGGGTTTTTATTTAAAAGAATGGAAAGGA
GTTTCGAAAAAAACATTAAGAACTTTTTTCTGGGGAATCGGGCTTATTATGCTTGCGATCATTTTGGTAGGAATTGGTAA
CTCATTATAA

Upstream 100 bases:

>100_bases
ACAAATCATAAAGGATAGTACAGGACAGTTTTAATTTTTACATTATATTATTTTACAAAACCAAACTAACTATCACAATT
AACCAAAAACAAATTATTAA

Downstream 100 bases:

>100_bases
ATAATACAAGAAATAATTATAAAGTATATGTCGAATACAAAAACAATTAATACAAATTTTAAGCACGTAAGCTACCTTTG
GGATGATGCTAAAGCCGCAG

Product: rhamnose-proton symporter

Products: Proton [Cytoplasm]; L-rhamnose [Cytoplasm] [C]

Alternate protein names: L-rhamnose-H(+) transport protein [H]

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MESLLGIIFHSIGGFSSGSFYMPFKKVKDWAWESYWLVGGFFSWLIVPPIAAYLTIPNFTEIIIAASPAIKSFTFLMGLI
WGIGGLTYGLGVRYLGMSLGNSITLGFCSAFGALVPSIYYDIVPTEGKISFTHMLSTSGGQLVLFGVVVYLIGIAISGKA
GMLKEKDFATGHEDKDKDFNLVKGLIVAVISGILSSFFNYGIEAGKPMAEHAIVNGANPLFQNNVTYVVLLWGGLTTNFI
WCLYLNFKNKTIKNYTDKSTPITKNVLFSALAGTMWFLQFFFYGMGESKLGNGASSWILHMATIILTANFWGFYLKEWKG
VSKKTLRTFFWGIGLIMLAIILVGIGNSL

Sequences:

>Translated_349_residues
MESLLGIIFHSIGGFSSGSFYMPFKKVKDWAWESYWLVGGFFSWLIVPPIAAYLTIPNFTEIIIAASPAIKSFTFLMGLI
WGIGGLTYGLGVRYLGMSLGNSITLGFCSAFGALVPSIYYDIVPTEGKISFTHMLSTSGGQLVLFGVVVYLIGIAISGKA
GMLKEKDFATGHEDKDKDFNLVKGLIVAVISGILSSFFNYGIEAGKPMAEHAIVNGANPLFQNNVTYVVLLWGGLTTNFI
WCLYLNFKNKTIKNYTDKSTPITKNVLFSALAGTMWFLQFFFYGMGESKLGNGASSWILHMATIILTANFWGFYLKEWKG
VSKKTLRTFFWGIGLIMLAIILVGIGNSL
>Mature_349_residues
MESLLGIIFHSIGGFSSGSFYMPFKKVKDWAWESYWLVGGFFSWLIVPPIAAYLTIPNFTEIIIAASPAIKSFTFLMGLI
WGIGGLTYGLGVRYLGMSLGNSITLGFCSAFGALVPSIYYDIVPTEGKISFTHMLSTSGGQLVLFGVVVYLIGIAISGKA
GMLKEKDFATGHEDKDKDFNLVKGLIVAVISGILSSFFNYGIEAGKPMAEHAIVNGANPLFQNNVTYVVLLWGGLTTNFI
WCLYLNFKNKTIKNYTDKSTPITKNVLFSALAGTMWFLQFFFYGMGESKLGNGASSWILHMATIILTANFWGFYLKEWKG
VSKKTLRTFFWGIGLIMLAIILVGIGNSL

Specific function: Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system) [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the L-rhamnose transporter (TC 2.A.7.6) family [H]

Homologues:

Organism=Escherichia coli, GI1790341, Length=347, Percent_Identity=39.193083573487, Blast_Score=225, Evalue=3e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004673
- InterPro:   IPR010476 [H]

Pfam domain/function: PF06379 RhaT [H]

EC number: NA

Molecular weight: Translated: 38342; Mature: 38342

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLLGIIFHSIGGFSSGSFYMPFKKVKDWAWESYWLVGGFFSWLIVPPIAAYLTIPNFT
CHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EIIIAASPAIKSFTFLMGLIWGIGGLTYGLGVRYLGMSLGNSITLGFCSAFGALVPSIYY
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
DIVPTEGKISFTHMLSTSGGQLVLFGVVVYLIGIAISGKAGMLKEKDFATGHEDKDKDFN
HCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
LVKGLIVAVISGILSSFFNYGIEAGKPMAEHAIVNGANPLFQNNVTYVVLLWGGLTTNFI
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHCCCEEEEEEECCHHHCEE
WCLYLNFKNKTIKNYTDKSTPITKNVLFSALAGTMWFLQFFFYGMGESKLGNGASSWILH
EEEEEECCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
MATIILTANFWGFYLKEWKGVSKKTLRTFFWGIGLIMLAIILVGIGNSL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MESLLGIIFHSIGGFSSGSFYMPFKKVKDWAWESYWLVGGFFSWLIVPPIAAYLTIPNFT
CHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EIIIAASPAIKSFTFLMGLIWGIGGLTYGLGVRYLGMSLGNSITLGFCSAFGALVPSIYY
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
DIVPTEGKISFTHMLSTSGGQLVLFGVVVYLIGIAISGKAGMLKEKDFATGHEDKDKDFN
HCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
LVKGLIVAVISGILSSFFNYGIEAGKPMAEHAIVNGANPLFQNNVTYVVLLWGGLTTNFI
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHCCCEEEEEEECCHHHCEE
WCLYLNFKNKTIKNYTDKSTPITKNVLFSALAGTMWFLQFFFYGMGESKLGNGASSWILH
EEEEEECCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
MATIILTANFWGFYLKEWKGVSKKTLRTFFWGIGLIMLAIILVGIGNSL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; L-rhamnose [Periplasm] [C]

Specific reaction: Proton [Periplasm] + L-rhamnose [Periplasm] = Proton [Cytoplasm] + L-rhamnose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA