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The map label for this gene is yagT [H]

Identifier: 146301938

GI number: 146301938

Start: 5053586

End: 5054308

Strand: Reverse

Name: yagT [H]

Synonym: Fjoh_4202

Alternate gene names: 146301938

Gene position: 5054308-5053586 (Counterclockwise)

Preceding gene: 146301940

Following gene: 146301937

Centisome position: 82.9

GC content: 40.94

Gene sequence:

>723_bases
TTGAATTTCATAACTTTTTGTGGATTAAGATTGTTAAATTTGTTAGAATACCCAAGTGATTTTGCTAATTTAAAGATAGA
TAGAATGGCTTCTAAAAAAACAAATCCGAATACGGCTGCAGAAAATGACTCAAATTCCCGTCGTGACTTTATAAAGAAAT
CGGGACTTTTTACTGCTCTGGCCTTTACACCGCCTTCGCTGGTAATGGCTTCAGAGAATAAATGGGATGAAAAAATAGCG
GAGTATTTAGAAACAGTACCGCTTTCTATCGAGGTAAACGGCAAAAAACACAATCTTAACATAGAACCAAGAACTACTTT
ACTGGATTTGTTAAGAGAGCAGTTACAGCTTACAGGAACCAAAAAAGGCTGTGACCACGGGCAATGCGGTGCATGTACAG
TTCACGTAAACGGAACAAGAATTTTGTCGTGCCTGACTCTGGCATCCATGCAGCAAAATGCACAGGTAACCACAATCGAA
GGACTTTCAAAAGGAAAAAAACTGCACCCAATGCAGGAAGCTTTTATCAAACATGACGGTTTTCAGTGCGGTTATTGCAC
GCCGGGACAAATCATGTCGGGAATTGCCTGTATCAAAGAAGGCCACGCCAACAGCAGAGAAGAAATCAGTGAATATATGA
GTGGCAATATCTGCCGTTGCGGCGCTTACCACAACATTGTTGATGCCATAACCGAAATGAAGGAAGGAGGGAAGGAACTA
TGA

Upstream 100 bases:

>100_bases
GAACTTTGCGTTTTTTATAGATGATAAAGAGAAAAAACTTTGCGCTCTTTGCGGTTAAATCTCAAAGCGAAATTGTAATT
ATTCTAAATAAGAGTAATGT

Downstream 100 bases:

>100_bases
AAAACTTTCAAATAATTAGAGCATTATCATCAGGTTCGGCGGTAACCAATATCAGCAAAGAAAAAGAAGCGATGTTTATT
GCGGGAGGAACCAATCTGGT

Product: 2Fe-2S iron-sulfur cluster binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MNFITFCGLRLLNLLEYPSDFANLKIDRMASKKTNPNTAAENDSNSRRDFIKKSGLFTALAFTPPSLVMASENKWDEKIA
EYLETVPLSIEVNGKKHNLNIEPRTTLLDLLREQLQLTGTKKGCDHGQCGACTVHVNGTRILSCLTLASMQQNAQVTTIE
GLSKGKKLHPMQEAFIKHDGFQCGYCTPGQIMSGIACIKEGHANSREEISEYMSGNICRCGAYHNIVDAITEMKEGGKEL

Sequences:

>Translated_240_residues
MNFITFCGLRLLNLLEYPSDFANLKIDRMASKKTNPNTAAENDSNSRRDFIKKSGLFTALAFTPPSLVMASENKWDEKIA
EYLETVPLSIEVNGKKHNLNIEPRTTLLDLLREQLQLTGTKKGCDHGQCGACTVHVNGTRILSCLTLASMQQNAQVTTIE
GLSKGKKLHPMQEAFIKHDGFQCGYCTPGQIMSGIACIKEGHANSREEISEYMSGNICRCGAYHNIVDAITEMKEGGKEL
>Mature_240_residues
MNFITFCGLRLLNLLEYPSDFANLKIDRMASKKTNPNTAAENDSNSRRDFIKKSGLFTALAFTPPSLVMASENKWDEKIA
EYLETVPLSIEVNGKKHNLNIEPRTTLLDLLREQLQLTGTKKGCDHGQCGACTVHVNGTRILSCLTLASMQQNAQVTTIE
GLSKGKKLHPMQEAFIKHDGFQCGYCTPGQIMSGIACIKEGHANSREEISEYMSGNICRCGAYHNIVDAITEMKEGGKEL

Specific function: Iron-sulfur subunit of the xanthine dehydrogenase complex [H]

COG id: COG2080

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI91823271, Length=155, Percent_Identity=40, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI71773480, Length=154, Percent_Identity=38.961038961039, Blast_Score=78, Evalue=6e-15,
Organism=Escherichia coli, GI1786480, Length=204, Percent_Identity=52.9411764705882, Blast_Score=200, Evalue=9e-53,
Organism=Escherichia coli, GI1789232, Length=153, Percent_Identity=43.1372549019608, Blast_Score=117, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI17540638, Length=154, Percent_Identity=38.961038961039, Blast_Score=104, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17539860, Length=151, Percent_Identity=35.7615894039735, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI32566215, Length=151, Percent_Identity=35.7615894039735, Blast_Score=95, Evalue=3e-20,
Organism=Drosophila melanogaster, GI17737937, Length=153, Percent_Identity=42.483660130719, Blast_Score=110, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24647201, Length=151, Percent_Identity=35.0993377483444, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24647193, Length=156, Percent_Identity=36.5384615384615, Blast_Score=91, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24647197, Length=160, Percent_Identity=35, Blast_Score=90, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24647195, Length=160, Percent_Identity=35, Blast_Score=90, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24647199, Length=137, Percent_Identity=37.2262773722628, Blast_Score=90, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002888
- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]

EC number: NA

Molecular weight: Translated: 26534; Mature: 26534

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFITFCGLRLLNLLEYPSDFANLKIDRMASKKTNPNTAAENDSNSRRDFIKKSGLFTAL
CCHHHHHHHHHHHHHHCCCHHHCEEHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCEEEE
AFTPPSLVMASENKWDEKIAEYLETVPLSIEVNGKKHNLNIEPRTTLLDLLREQLQLTGT
EECCCCEEEECCCCHHHHHHHHHHHCCCEEEECCCEECCCCCHHHHHHHHHHHHHHHCCC
KKGCDHGQCGACTVHVNGTRILSCLTLASMQQNAQVTTIEGLSKGKKLHPMQEAFIKHDG
CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCHHHHHHHHCCC
FQCGYCTPGQIMSGIACIKEGHANSREEISEYMSGNICRCGAYHNIVDAITEMKEGGKEL
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNFITFCGLRLLNLLEYPSDFANLKIDRMASKKTNPNTAAENDSNSRRDFIKKSGLFTAL
CCHHHHHHHHHHHHHHCCCHHHCEEHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCEEEE
AFTPPSLVMASENKWDEKIAEYLETVPLSIEVNGKKHNLNIEPRTTLLDLLREQLQLTGT
EECCCCEEEECCCCHHHHHHHHHHHCCCEEEECCCEECCCCCHHHHHHHHHHHHHHHCCC
KKGCDHGQCGACTVHVNGTRILSCLTLASMQQNAQVTTIEGLSKGKKLHPMQEAFIKHDG
CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCHHHHHHHHCCC
FQCGYCTPGQIMSGIACIKEGHANSREEISEYMSGNICRCGAYHNIVDAITEMKEGGKEL
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]