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The map label for this gene is uidA [H]

Identifier: 146301934

GI number: 146301934

Start: 5047727

End: 5049523

Strand: Direct

Name: uidA [H]

Synonym: Fjoh_4198

Alternate gene names: 146301934

Gene position: 5047727-5049523 (Clockwise)

Preceding gene: 146301933

Following gene: 146301935

Centisome position: 82.79

GC content: 33.56

Gene sequence:

>1797_bases
ATGAAAAAACTATTAACTGCATTACTCCTAACTTCTTCTATTCTAGGATTTGCACAAAATTTAATCTCCAATGTACCAAA
CCGAAACACAACTTCTTTAAACGGAGTTTGGAATTATATTATCGATCCGTATCAAACGGGTTTTTACAGCTTTCACTTAG
ATCAATACGATAAAAATGAAAAACCGGCAAAAGGGGCATTTTTTAGTAATTATCATACTCAAAATAAACAGGAACTGGTA
GAATATGATTTTGATAAATCGCCCACAATTAATATCCCAAGCGATTGGAATTCGCAGGTTGCGGAGCTGAAATATTACGA
AGGAAATGTTTGGTTTAAAAAATCATTTGATTATAATTTAAAAGATAAAAAACGTCTGTTTTTATACTTAGGAGCCATTA
ATTATAAAGCTGATGTGTATTTAAACGGAAAAAAACTCGGCACACATGAAGGCGGCTTTACACCATTTAATTATGAAGTA
ACTTCGATTGTACAGCCAAAAGGCAATTATTTGGTAATAAAAGTGGATAATACACGCCATAAAGAAGATGTGCCGACTGT
TAATACTGACTGGTGGAATTACGGAGGCATTACGCGCGATGTGACTTTAATTGAAGAAGAAGCTTCTTTTGTGGAAGATT
ATACTATTCAGCTGAAAAAAGGCAATAAATCGGTTATTTCCGGTTTTATTAAAATCAATAATTTTGATGCTTCACAAAAT
AATATTTCGATTTCTATTCCTGAATTAAAAATCAATTTTAAAGGAAAAGCGGATGCTCAGGGAATTTTAAATTTCGAAAT
TCCTGCGAAAAAAATCTCGTATTGGTCGCCTGAAAGTCCGAAATTATATGATGTAACGATTGACTTTAACGGACAAAAAT
TAAAAGATCAAATTGGTTTTAGAACTATCGAAACAAACGAAGATAAAATTCTGCTTAATGGAAAACCTGTTTTCTTAAGA
GGAATTTCAATTCACGAAGAAAATGCCAAAGGCGGCCGCGCTAATTCTGTTGAAGATGCTTTGCGTTTATTAAACTGGGC
AAAAGAAATGGGATGTAATTATGTTCGTCTGGCACATTATCCGCATAACGAAAACATCATTCGCGAAGCTGATAAAATGG
GAATAATGGTTTGGGAAGAAATTCCAGTATACTGGACTGTAGAATTTACAAACAAAAACACGTATCAAAATGCCGAAGAT
CAATTAACTACTTCTATTACAAGAGATAAAAACAGAGCCAGTATTATTATTTGGTCAATGGCAAATGAAACACCAATTTC
TGAAGCCAGAAATACTTTCATCAAAAATTTAGCATCACACACGAGATCATTAGACAATACGAGATTAATCAGCGCTGCTT
TATTAACAAAAAAAGAAACTATTGATGATCCAATTGGTGAAGTTTTAGATGTTGTGGCTTTCAATCAATATTTAGGCTGG
TACGGCGGTAATTTAGAAGATGCTGAGAAAATAACATGGAAATCGAAATATAATAAACCTATTGTTGTTTCTGAATTTGG
CGGTGATGCGAAAGCTGGTTTTCATGGAGAAAAAAATGAGCGCTGGACTGAGGAATATCAGGAATACCTATATATTCAGA
ATTTAAAAATGATTGAAAAAATCCCGCATCTAAGCGGTACAAGTCCTTGGATTCTGGTCGATTTTAGATCTCCAAAAAGA
TTACTTCCGGGAATTCAGGACGGTTACAACCGTAAAGGTTTAATTTCAAATGACGGTGAAAAGAAAAAAGCTTTTTATAT
TATGCAGGATTGGTACTTGAAGAAGAGCAAAGAGTAA

Upstream 100 bases:

>100_bases
TTAAATCTGCGTGAAACAAAATCATTTTAATCCTTATAATCTGCGGCTATAAATAAAAATCTCCGTGGCAAGTACAAACA
AATACAAATTAATACCAAAA

Downstream 100 bases:

>100_bases
TTAGTAAAGAGTAATGAGTGAAGAGTGAAGAGGAAAGAATGTAGAAGAAAGAATAAAGAGTATTACCAATTCATTAACAA
AAAACCGACTGTAAATTATA

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: GUS; Beta-D-glucuronoside glucuronosohydrolase [H]

Number of amino acids: Translated: 598; Mature: 598

Protein sequence:

>598_residues
MKKLLTALLLTSSILGFAQNLISNVPNRNTTSLNGVWNYIIDPYQTGFYSFHLDQYDKNEKPAKGAFFSNYHTQNKQELV
EYDFDKSPTINIPSDWNSQVAELKYYEGNVWFKKSFDYNLKDKKRLFLYLGAINYKADVYLNGKKLGTHEGGFTPFNYEV
TSIVQPKGNYLVIKVDNTRHKEDVPTVNTDWWNYGGITRDVTLIEEEASFVEDYTIQLKKGNKSVISGFIKINNFDASQN
NISISIPELKINFKGKADAQGILNFEIPAKKISYWSPESPKLYDVTIDFNGQKLKDQIGFRTIETNEDKILLNGKPVFLR
GISIHEENAKGGRANSVEDALRLLNWAKEMGCNYVRLAHYPHNENIIREADKMGIMVWEEIPVYWTVEFTNKNTYQNAED
QLTTSITRDKNRASIIIWSMANETPISEARNTFIKNLASHTRSLDNTRLISAALLTKKETIDDPIGEVLDVVAFNQYLGW
YGGNLEDAEKITWKSKYNKPIVVSEFGGDAKAGFHGEKNERWTEEYQEYLYIQNLKMIEKIPHLSGTSPWILVDFRSPKR
LLPGIQDGYNRKGLISNDGEKKKAFYIMQDWYLKKSKE

Sequences:

>Translated_598_residues
MKKLLTALLLTSSILGFAQNLISNVPNRNTTSLNGVWNYIIDPYQTGFYSFHLDQYDKNEKPAKGAFFSNYHTQNKQELV
EYDFDKSPTINIPSDWNSQVAELKYYEGNVWFKKSFDYNLKDKKRLFLYLGAINYKADVYLNGKKLGTHEGGFTPFNYEV
TSIVQPKGNYLVIKVDNTRHKEDVPTVNTDWWNYGGITRDVTLIEEEASFVEDYTIQLKKGNKSVISGFIKINNFDASQN
NISISIPELKINFKGKADAQGILNFEIPAKKISYWSPESPKLYDVTIDFNGQKLKDQIGFRTIETNEDKILLNGKPVFLR
GISIHEENAKGGRANSVEDALRLLNWAKEMGCNYVRLAHYPHNENIIREADKMGIMVWEEIPVYWTVEFTNKNTYQNAED
QLTTSITRDKNRASIIIWSMANETPISEARNTFIKNLASHTRSLDNTRLISAALLTKKETIDDPIGEVLDVVAFNQYLGW
YGGNLEDAEKITWKSKYNKPIVVSEFGGDAKAGFHGEKNERWTEEYQEYLYIQNLKMIEKIPHLSGTSPWILVDFRSPKR
LLPGIQDGYNRKGLISNDGEKKKAFYIMQDWYLKKSKE
>Mature_598_residues
MKKLLTALLLTSSILGFAQNLISNVPNRNTTSLNGVWNYIIDPYQTGFYSFHLDQYDKNEKPAKGAFFSNYHTQNKQELV
EYDFDKSPTINIPSDWNSQVAELKYYEGNVWFKKSFDYNLKDKKRLFLYLGAINYKADVYLNGKKLGTHEGGFTPFNYEV
TSIVQPKGNYLVIKVDNTRHKEDVPTVNTDWWNYGGITRDVTLIEEEASFVEDYTIQLKKGNKSVISGFIKINNFDASQN
NISISIPELKINFKGKADAQGILNFEIPAKKISYWSPESPKLYDVTIDFNGQKLKDQIGFRTIETNEDKILLNGKPVFLR
GISIHEENAKGGRANSVEDALRLLNWAKEMGCNYVRLAHYPHNENIIREADKMGIMVWEEIPVYWTVEFTNKNTYQNAED
QLTTSITRDKNRASIIIWSMANETPISEARNTFIKNLASHTRSLDNTRLISAALLTKKETIDDPIGEVLDVVAFNQYLGW
YGGNLEDAEKITWKSKYNKPIVVSEFGGDAKAGFHGEKNERWTEEYQEYLYIQNLKMIEKIPHLSGTSPWILVDFRSPKR
LLPGIQDGYNRKGLISNDGEKKKAFYIMQDWYLKKSKE

Specific function: Unknown

COG id: COG3250

COG function: function code G; Beta-galactosidase/beta-glucuronidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 2 family [H]

Homologues:

Organism=Homo sapiens, GI268834192, Length=654, Percent_Identity=25.5351681957187, Blast_Score=189, Evalue=6e-48,
Organism=Escherichia coli, GI1787903, Length=628, Percent_Identity=25.4777070063694, Blast_Score=202, Evalue=5e-53,
Organism=Escherichia coli, GI48994920, Length=386, Percent_Identity=24.6113989637306, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI1786539, Length=396, Percent_Identity=21.4646464646465, Blast_Score=72, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17510825, Length=623, Percent_Identity=24.8796147672552, Blast_Score=173, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI17550784, Length=374, Percent_Identity=23.5294117647059, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24655438, Length=627, Percent_Identity=26.7942583732057, Blast_Score=216, Evalue=5e-56,
Organism=Drosophila melanogaster, GI62471735, Length=627, Percent_Identity=26.7942583732057, Blast_Score=215, Evalue=6e-56,
Organism=Drosophila melanogaster, GI19922582, Length=627, Percent_Identity=26.7942583732057, Blast_Score=215, Evalue=6e-56,
Organism=Drosophila melanogaster, GI24651745, Length=634, Percent_Identity=24.7634069400631, Blast_Score=191, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008979
- InterPro:   IPR006101
- InterPro:   IPR013812
- InterPro:   IPR006104
- InterPro:   IPR006102
- InterPro:   IPR006103
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00703 Glyco_hydro_2; PF02836 Glyco_hydro_2_C; PF02837 Glyco_hydro_2_N [H]

EC number: =3.2.1.31 [H]

Molecular weight: Translated: 68827; Mature: 68827

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS00608 GLYCOSYL_HYDROL_F2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLTALLLTSSILGFAQNLISNVPNRNTTSLNGVWNYIIDPYQTGFYSFHLDQYDKNE
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCC
KPAKGAFFSNYHTQNKQELVEYDFDKSPTINIPSDWNSQVAELKYYEGNVWFKKSFDYNL
CCCCCCEECCCCCCCHHHHHHCCCCCCCEEECCCCCCCCEEEEEEEECCEEEEECCCCCC
KDKKRLFLYLGAINYKADVYLNGKKLGTHEGGFTPFNYEVTSIVQPKGNYLVIKVDNTRH
CCCEEEEEEEEEECEEEEEEECCCEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCC
KEDVPTVNTDWWNYGGITRDVTLIEEEASFVEDYTIQLKKGNKSVISGFIKINNFDASQN
CCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHEEEEEEEECCCHHHEEEEEEEEECCCCCC
NISISIPELKINFKGKADAQGILNFEIPAKKISYWSPESPKLYDVTIDFNGQKLKDQIGF
CEEEEECEEEEEECCCCCCCCEEEEECCHHHCCCCCCCCCEEEEEEEECCCCHHHHHHCE
RTIETNEDKILLNGKPVFLRGISIHEENAKGGRANSVEDALRLLNWAKEMGCNYVRLAHY
EEEECCCCEEEECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEC
PHNENIIREADKMGIMVWEEIPVYWTVEFTNKNTYQNAEDQLTTSITRDKNRASIIIWSM
CCCCCHHHHHHHCCEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEEE
ANETPISEARNTFIKNLASHTRSLDNTRLISAALLTKKETIDDPIGEVLDVVAFNQYLGW
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
YGGNLEDAEKITWKSKYNKPIVVSEFGGDAKAGFHGEKNERWTEEYQEYLYIQNLKMIEK
CCCCCCCCHHEEEHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHH
IPHLSGTSPWILVDFRSPKRLLPGIQDGYNRKGLISNDGEKKKAFYIMQDWYLKKSKE
CCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCC
>Mature Secondary Structure
MKKLLTALLLTSSILGFAQNLISNVPNRNTTSLNGVWNYIIDPYQTGFYSFHLDQYDKNE
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCC
KPAKGAFFSNYHTQNKQELVEYDFDKSPTINIPSDWNSQVAELKYYEGNVWFKKSFDYNL
CCCCCCEECCCCCCCHHHHHHCCCCCCCEEECCCCCCCCEEEEEEEECCEEEEECCCCCC
KDKKRLFLYLGAINYKADVYLNGKKLGTHEGGFTPFNYEVTSIVQPKGNYLVIKVDNTRH
CCCEEEEEEEEEECEEEEEEECCCEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCC
KEDVPTVNTDWWNYGGITRDVTLIEEEASFVEDYTIQLKKGNKSVISGFIKINNFDASQN
CCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHEEEEEEEECCCHHHEEEEEEEEECCCCCC
NISISIPELKINFKGKADAQGILNFEIPAKKISYWSPESPKLYDVTIDFNGQKLKDQIGF
CEEEEECEEEEEECCCCCCCCEEEEECCHHHCCCCCCCCCEEEEEEEECCCCHHHHHHCE
RTIETNEDKILLNGKPVFLRGISIHEENAKGGRANSVEDALRLLNWAKEMGCNYVRLAHY
EEEECCCCEEEECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEC
PHNENIIREADKMGIMVWEEIPVYWTVEFTNKNTYQNAEDQLTTSITRDKNRASIIIWSM
CCCCCHHHHHHHCCEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEEE
ANETPISEARNTFIKNLASHTRSLDNTRLISAALLTKKETIDDPIGEVLDVVAFNQYLGW
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
YGGNLEDAEKITWKSKYNKPIVVSEFGGDAKAGFHGEKNERWTEEYQEYLYIQNLKMIEK
CCCCCCCCHHEEEHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHH
IPHLSGTSPWILVDFRSPKRLLPGIQDGYNRKGLISNDGEKKKAFYIMQDWYLKKSKE
CCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3534890; 8125312; 2103475; 9097039; 9278503 [H]