| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301923
Identifier: 146301923
GI number: 146301923
Start: 5027647
End: 5028816
Strand: Direct
Name: 146301923
Synonym: Fjoh_4187
Alternate gene names: NA
Gene position: 5027647-5028816 (Clockwise)
Preceding gene: 146301919
Following gene: 146301925
Centisome position: 82.46
GC content: 35.9
Gene sequence:
>1170_bases GTGAAAAAACATTTTTTATCAATCGCAATTCTGGCAGGAACTTTTACAGTTCAGTCTCAAAATAAAATTATTACGATCAG CAATAATTTAAAAACCGACAGAGAATTTGAAACTGTAGAACTAACAAAAAAAATTCTTGGATTAACAGCCAATTCAAAAC TTGAAAATTATGCCGTTAAAGATCTTGGCAGTAATTCATTTTTAGAAACCCAGACTGTAGACAATGACGGAGACGGAACG GCAGATGTTTTGTTGTTTCAGCCAAAGATCAAAGCATCTTCTAAACAAGATTTTGAAGTTTTAGCTGGTACGAATCCTTC AGCTTCAAAAGAAATTAGCTGCTATTCACGCTTTGTTCCGGAACGTACAGACGATTATGCCTGGGAAAACAACAAAGTCG CTTTTAGAACTTATGGTCCTGTGGCTCAAAAAATGGTCGAGGATAAAATTCCCGGAGGTACTTTAACAAGCGGCATTGAT GCGTGGCTGAAAAGAGTCGATTATCCAATTATCAACAAATGGTATGAAAAAGCCACTAACGGAACAGGAACGTATCATAA AGATACTGGTGAAGGTCTGGATAATTTTCATGTTGGAGACAGCCGCGGTGTGGGCGGAATTGCAGTAAAAGTCGACGGAA AGTATTATTTCTCGAAAAATTTCATCAGCTGGAAAACGATTACGACCGGTCCAATCAGAACGAGTTTTATTTTAACTTAT GCTGACTGGGACGCCAAAGGAAATAAAATAACCGAATCAAAATTAATCAGTTTAGATTACGGAAGCCAGCTTTCGCGCTT TGAAATCAATATTACAGGAACTAAGGAAATTGCTGCCGGATTAACACTTCATGATAAAAAAGGAACAATTGGAACTAATT TAAAAGAAGGCTGGTTAAGCTATTGGGAACCTATTGATGATTCTGAAATAGGAACTGGTTTAGTGGCTCCAAAAAACACT TTGCTGAGTTTTGACCATCATGTAACAGATGAAAAAGATTTAAGCAATCTTTATGGAAACATTGCTGTAAAAAACAATAA AGCCGTCTATTATGTTGGTTTTGGATGGAAAAAAGGAAGTCCGTTTCAAACCAAACAAGAATGGGAAAAATATCTAAGTT CTTTTGCAGAAAAAATCAATAATCCATTGATTGTGAAGATTAAGAAATAA
Upstream 100 bases:
>100_bases AAACACTTGTACATTATTACCCTATTTATGGATTTAAACAATCTTTTAGATTCGTATTTTTATGAAATAAAAAAAAGCAG AAATTTAAAATATTCATATT
Downstream 100 bases:
>100_bases TAATCATTACCCGCAGATTTTACGGATGAAACGGATTGATGCAGCTTATTTTAAAATAAACCTGCCTAATCCGTAAAATC TGTGGTTTAGATTAAATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MKKHFLSIAILAGTFTVQSQNKIITISNNLKTDREFETVELTKKILGLTANSKLENYAVKDLGSNSFLETQTVDNDGDGT ADVLLFQPKIKASSKQDFEVLAGTNPSASKEISCYSRFVPERTDDYAWENNKVAFRTYGPVAQKMVEDKIPGGTLTSGID AWLKRVDYPIINKWYEKATNGTGTYHKDTGEGLDNFHVGDSRGVGGIAVKVDGKYYFSKNFISWKTITTGPIRTSFILTY ADWDAKGNKITESKLISLDYGSQLSRFEINITGTKEIAAGLTLHDKKGTIGTNLKEGWLSYWEPIDDSEIGTGLVAPKNT LLSFDHHVTDEKDLSNLYGNIAVKNNKAVYYVGFGWKKGSPFQTKQEWEKYLSSFAEKINNPLIVKIKK
Sequences:
>Translated_389_residues MKKHFLSIAILAGTFTVQSQNKIITISNNLKTDREFETVELTKKILGLTANSKLENYAVKDLGSNSFLETQTVDNDGDGT ADVLLFQPKIKASSKQDFEVLAGTNPSASKEISCYSRFVPERTDDYAWENNKVAFRTYGPVAQKMVEDKIPGGTLTSGID AWLKRVDYPIINKWYEKATNGTGTYHKDTGEGLDNFHVGDSRGVGGIAVKVDGKYYFSKNFISWKTITTGPIRTSFILTY ADWDAKGNKITESKLISLDYGSQLSRFEINITGTKEIAAGLTLHDKKGTIGTNLKEGWLSYWEPIDDSEIGTGLVAPKNT LLSFDHHVTDEKDLSNLYGNIAVKNNKAVYYVGFGWKKGSPFQTKQEWEKYLSSFAEKINNPLIVKIKK >Mature_389_residues MKKHFLSIAILAGTFTVQSQNKIITISNNLKTDREFETVELTKKILGLTANSKLENYAVKDLGSNSFLETQTVDNDGDGT ADVLLFQPKIKASSKQDFEVLAGTNPSASKEISCYSRFVPERTDDYAWENNKVAFRTYGPVAQKMVEDKIPGGTLTSGID AWLKRVDYPIINKWYEKATNGTGTYHKDTGEGLDNFHVGDSRGVGGIAVKVDGKYYFSKNFISWKTITTGPIRTSFILTY ADWDAKGNKITESKLISLDYGSQLSRFEINITGTKEIAAGLTLHDKKGTIGTNLKEGWLSYWEPIDDSEIGTGLVAPKNT LLSFDHHVTDEKDLSNLYGNIAVKNNKAVYYVGFGWKKGSPFQTKQEWEKYLSSFAEKINNPLIVKIKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43386; Mature: 43386
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHFLSIAILAGTFTVQSQNKIITISNNLKTDREFETVELTKKILGLTANSKLENYAVK CCCCEEEEEEEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH DLGSNSFLETQTVDNDGDGTADVLLFQPKIKASSKQDFEVLAGTNPSASKEISCYSRFVP HCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCC ERTDDYAWENNKVAFRTYGPVAQKMVEDKIPGGTLTSGIDAWLKRVDYPIINKWYEKATN CCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC GTGTYHKDTGEGLDNFHVGDSRGVGGIAVKVDGKYYFSKNFISWKTITTGPIRTSFILTY CCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCEEEEEEEECCCCEEEEEEEE ADWDAKGNKITESKLISLDYGSQLSRFEINITGTKEIAAGLTLHDKKGTIGTNLKEGWLS ECCCCCCCEECCCEEEEEECCCCCEEEEEEECCCHHHHCCCEEECCCCCCCCCHHHHHHH YWEPIDDSEIGTGLVAPKNTLLSFDHHVTDEKDLSNLYGNIAVKNNKAVYYVGFGWKKGS HCCCCCCCCCCCCEECCCCCEEECCCCCCCHHHHHHHCCEEEEECCCEEEEEEECCCCCC PFQTKQEWEKYLSSFAEKINNPLIVKIKK CCCCHHHHHHHHHHHHHHCCCCEEEEEEC >Mature Secondary Structure MKKHFLSIAILAGTFTVQSQNKIITISNNLKTDREFETVELTKKILGLTANSKLENYAVK CCCCEEEEEEEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH DLGSNSFLETQTVDNDGDGTADVLLFQPKIKASSKQDFEVLAGTNPSASKEISCYSRFVP HCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCC ERTDDYAWENNKVAFRTYGPVAQKMVEDKIPGGTLTSGIDAWLKRVDYPIINKWYEKATN CCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC GTGTYHKDTGEGLDNFHVGDSRGVGGIAVKVDGKYYFSKNFISWKTITTGPIRTSFILTY CCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCEEEEEEEECCCCEEEEEEEE ADWDAKGNKITESKLISLDYGSQLSRFEINITGTKEIAAGLTLHDKKGTIGTNLKEGWLS ECCCCCCCEECCCEEEEEECCCCCEEEEEEECCCHHHHCCCEEECCCCCCCCCHHHHHHH YWEPIDDSEIGTGLVAPKNTLLSFDHHVTDEKDLSNLYGNIAVKNNKAVYYVGFGWKKGS HCCCCCCCCCCCCEECCCCCEEECCCCCCCHHHHHHHCCEEEEECCCEEEEEEECCCCCC PFQTKQEWEKYLSSFAEKINNPLIVKIKK CCCCHHHHHHHHHHHHHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA