| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301892
Identifier: 146301892
GI number: 146301892
Start: 4987536
End: 4988249
Strand: Reverse
Name: 146301892
Synonym: Fjoh_4156
Alternate gene names: NA
Gene position: 4988249-4987536 (Counterclockwise)
Preceding gene: 146301893
Following gene: 146301891
Centisome position: 81.82
GC content: 34.03
Gene sequence:
>714_bases ATGAACTACATACAAAAAATAAAACGCCTTTACGGACTTTCTGAAAAGGAAAACTACGGATTTTCTGAAGATGAAATCCT CGCAGTCGAAAAAGATTTAGAAATTACATTTCCGAAAAAACTCAAAGAATATTATCTGGAATTAGGAAAAGAAGAAAACC TTAATTACGCACATAACCGACTAATGAAACCCAATGGAGAAATTGAATTCTCTGAAGATGATGTTCTGGTTATTTATGAA GAAAATCAGGTTGTGGCGATGTGGGGAATTAAAAAAGACGATTTAAAACTGGATAATCCCCCGGTTTACGGAAGTTACGA TACCATCGAACAATCAGATTGGGAAATTGAAACCCAGACTACAGATAATTTCTTTCTGTTTATGGGCGTATATAACGGAA CATTAGGAGGGTTGAAATACAATGGAAATTATTTAGGTCCAGTAGATTCAGAAATTGTAAAATTTGTGGAAGAAAACTGG AAATCTGCACCCGAAATAAGCAGAGACAATCAAAAAGTATATACAAACAATTTTTATGATGTAATTAGTTTGTCATTCGA TCAAAATAAAAATTGTACTGCTGCTTTTATCGGAACCAGCGATCAAAATCGTTTTGACGAAATTCTGGATTGTATAGACA TCGATTGGTCTTACCTTTCGTATGATGACGACGAAGCTTATGACGACGATGATGAAGATGAAGAAAATGAATAG
Upstream 100 bases:
>100_bases AGAAATTGATAATTGGACAGAAGAAATTGTTATAGACCTGCTGGACGAAAAAACGGTTAAAAAATGGAGATATTAATCTC TAAAAAAAGAAGACTTTACA
Downstream 100 bases:
>100_bases TTATGTGGTTCAGTAAATTTAGCTTTTTCGATAAACAGTCCGGTTTAACAGAATTGGTTTCAGACGATTTCTTTACAAAA CCATTTTCAAAAGAAGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MNYIQKIKRLYGLSEKENYGFSEDEILAVEKDLEITFPKKLKEYYLELGKEENLNYAHNRLMKPNGEIEFSEDDVLVIYE ENQVVAMWGIKKDDLKLDNPPVYGSYDTIEQSDWEIETQTTDNFFLFMGVYNGTLGGLKYNGNYLGPVDSEIVKFVEENW KSAPEISRDNQKVYTNNFYDVISLSFDQNKNCTAAFIGTSDQNRFDEILDCIDIDWSYLSYDDDEAYDDDDEDEENE
Sequences:
>Translated_237_residues MNYIQKIKRLYGLSEKENYGFSEDEILAVEKDLEITFPKKLKEYYLELGKEENLNYAHNRLMKPNGEIEFSEDDVLVIYE ENQVVAMWGIKKDDLKLDNPPVYGSYDTIEQSDWEIETQTTDNFFLFMGVYNGTLGGLKYNGNYLGPVDSEIVKFVEENW KSAPEISRDNQKVYTNNFYDVISLSFDQNKNCTAAFIGTSDQNRFDEILDCIDIDWSYLSYDDDEAYDDDDEDEENE >Mature_237_residues MNYIQKIKRLYGLSEKENYGFSEDEILAVEKDLEITFPKKLKEYYLELGKEENLNYAHNRLMKPNGEIEFSEDDVLVIYE ENQVVAMWGIKKDDLKLDNPPVYGSYDTIEQSDWEIETQTTDNFFLFMGVYNGTLGGLKYNGNYLGPVDSEIVKFVEENW KSAPEISRDNQKVYTNNFYDVISLSFDQNKNCTAAFIGTSDQNRFDEILDCIDIDWSYLSYDDDEAYDDDDEDEENE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27744; Mature: 27744
Theoretical pI: Translated: 3.84; Mature: 3.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYIQKIKRLYGLSEKENYGFSEDEILAVEKDLEITFPKKLKEYYLELGKEENLNYAHNR CCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEECHHHHHHHHHHCCCCCCCCHHHHH LMKPNGEIEFSEDDVLVIYEENQVVAMWGIKKDDLKLDNPPVYGSYDTIEQSDWEIETQT CCCCCCCEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC TDNFFLFMGVYNGTLGGLKYNGNYLGPVDSEIVKFVEENWKSAPEISRDNQKVYTNNFYD CCCEEEEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEE VISLSFDQNKNCTAAFIGTSDQNRFDEILDCIDIDWSYLSYDDDEAYDDDDEDEENE EEEEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNYIQKIKRLYGLSEKENYGFSEDEILAVEKDLEITFPKKLKEYYLELGKEENLNYAHNR CCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEECHHHHHHHHHHCCCCCCCCHHHHH LMKPNGEIEFSEDDVLVIYEENQVVAMWGIKKDDLKLDNPPVYGSYDTIEQSDWEIETQT CCCCCCCEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC TDNFFLFMGVYNGTLGGLKYNGNYLGPVDSEIVKFVEENWKSAPEISRDNQKVYTNNFYD CCCEEEEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEE VISLSFDQNKNCTAAFIGTSDQNRFDEILDCIDIDWSYLSYDDDEAYDDDDEDEENE EEEEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA