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The map label for this gene is ycjN [C]

Identifier: 146301861

GI number: 146301861

Start: 4957932

End: 4959158

Strand: Direct

Name: ycjN [C]

Synonym: Fjoh_4125

Alternate gene names: 146301861

Gene position: 4957932-4959158 (Clockwise)

Preceding gene: 146301860

Following gene: 146301862

Centisome position: 81.32

GC content: 37.16

Gene sequence:

>1227_bases
ATGGAAAAATTTAGAATCGCTGTTAGAAAATTTTCTCCTTTTGAAAGTACGCTGCAAAAGCTGTGGGATAACTTCTGTCT
GAAAAATAATATTCAGATTGAGGTTGAAATGATTCCGCTTGAATTGCACGATCTTTATGAAGAAACCATTACCAATAAAG
GTTTAAAAACCGGAAAATGGGATATCGCACACCTAAATACCGATTGGATTTTTGATGCTGCAAATGAAAAAGCGGTTCTG
GATTTAACTTCTTTTATTAACCAAAACCCGCCTCAGGATTATCCCGAAGGCTGGCATCAATCGCTGTTAAACCTGCAGCA
TATTAATGGCAGTATTTACGGACTTCCGTTTCACGACGGCCCGGAATGCCTTATTTACAGAAAAGATTTATTTGAAGATG
TAACTGAAAAAGAAAACTTCAAGAAACAATTTGGTTACGAATTGTTCCCTCCAAAAAACTGGGAGCAATTCACCCAAATT
GCTTCGTTTTTTAATAGGCCCGAAAGTAATTTATCCGGCTGTGTTTTCGCCAATTATCCTGACGGTCATAATATGGTTTT
TGATTTCTGCCTGCAGTTATGGACTCGCGGCGGTTCTCTTTTAGATCATCAAAACAAAATAAACATCAATCATAATCAAG
CAGTTAAAGCTTTAGATTATTATAGAAAAATCGTTAACAATACAAATGCAGTTCATCCGGGTTCAAAGAATTTTGGTTCT
GTTGAAGCTGGAATGGCTTTCGCCGAAGGACAGGCTGCAATGGCAATTAACTGGTTTGGATTTGCTTCTATGTGTGAAGT
AATTGAGGAATCGAAAGTAAAAGGCAAAGTTGACATTACTGAATTACCGCACGATGAAAACCACAAAACGGCTTCATTAA
ATGTGTATTGGCTTTATACTATTGGCATTGGAAGTAAAAATAAAGCACTCGCGTTTGACTTTTTGCGATTTGCTACAACT
GCCGAAAGCGATAAATTATTGACAACCGAAGGCGGGATTGGATGCAGAAAATCAACCTGGAATGATGCCGAAATCAATAA
AACGATTCCCTATTATCATAAACTGGAAATGCTGCATGAAAACGCTTTGACTTTGCCGCAAACGCCAATTTGGCCAAAAG
TGGCAGAATTGATAGATCAAATGGTTTTAAAAGCGATTGAAACAGATATTCCGTCGGAAAAACTTTTAGAACAAACACAG
GAAAATATTGAAAAACTAACGAATTGA

Upstream 100 bases:

>100_bases
GTCCTATAAAAATCGACGGCGAATACTTTACATCGACTAAAGGTTCTCCAAAATTAGGACAGGATAACGAGCGAATTATA
AAAGAATTTATAGCATAGAT

Downstream 100 bases:

>100_bases
TTAGAACTGATCAATAAACTTAAAATAGCACAAAAATGAATATTCCATATAAACCTTTACTGCCCGAAACCAAACAGCCC
ATTATCATTATCGGCGCAAG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MEKFRIAVRKFSPFESTLQKLWDNFCLKNNIQIEVEMIPLELHDLYEETITNKGLKTGKWDIAHLNTDWIFDAANEKAVL
DLTSFINQNPPQDYPEGWHQSLLNLQHINGSIYGLPFHDGPECLIYRKDLFEDVTEKENFKKQFGYELFPPKNWEQFTQI
ASFFNRPESNLSGCVFANYPDGHNMVFDFCLQLWTRGGSLLDHQNKININHNQAVKALDYYRKIVNNTNAVHPGSKNFGS
VEAGMAFAEGQAAMAINWFGFASMCEVIEESKVKGKVDITELPHDENHKTASLNVYWLYTIGIGSKNKALAFDFLRFATT
AESDKLLTTEGGIGCRKSTWNDAEINKTIPYYHKLEMLHENALTLPQTPIWPKVAELIDQMVLKAIETDIPSEKLLEQTQ
ENIEKLTN

Sequences:

>Translated_408_residues
MEKFRIAVRKFSPFESTLQKLWDNFCLKNNIQIEVEMIPLELHDLYEETITNKGLKTGKWDIAHLNTDWIFDAANEKAVL
DLTSFINQNPPQDYPEGWHQSLLNLQHINGSIYGLPFHDGPECLIYRKDLFEDVTEKENFKKQFGYELFPPKNWEQFTQI
ASFFNRPESNLSGCVFANYPDGHNMVFDFCLQLWTRGGSLLDHQNKININHNQAVKALDYYRKIVNNTNAVHPGSKNFGS
VEAGMAFAEGQAAMAINWFGFASMCEVIEESKVKGKVDITELPHDENHKTASLNVYWLYTIGIGSKNKALAFDFLRFATT
AESDKLLTTEGGIGCRKSTWNDAEINKTIPYYHKLEMLHENALTLPQTPIWPKVAELIDQMVLKAIETDIPSEKLLEQTQ
ENIEKLTN
>Mature_408_residues
MEKFRIAVRKFSPFESTLQKLWDNFCLKNNIQIEVEMIPLELHDLYEETITNKGLKTGKWDIAHLNTDWIFDAANEKAVL
DLTSFINQNPPQDYPEGWHQSLLNLQHINGSIYGLPFHDGPECLIYRKDLFEDVTEKENFKKQFGYELFPPKNWEQFTQI
ASFFNRPESNLSGCVFANYPDGHNMVFDFCLQLWTRGGSLLDHQNKININHNQAVKALDYYRKIVNNTNAVHPGSKNFGS
VEAGMAFAEGQAAMAINWFGFASMCEVIEESKVKGKVDITELPHDENHKTASLNVYWLYTIGIGSKNKALAFDFLRFATT
AESDKLLTTEGGIGCRKSTWNDAEINKTIPYYHKLEMLHENALTLPQTPIWPKVAELIDQMVLKAIETDIPSEKLLEQTQ
ENIEKLTN

Specific function: Probably part of a binding-protein-dependent transport system [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46808; Mature: 46808

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKFRIAVRKFSPFESTLQKLWDNFCLKNNIQIEVEMIPLELHDLYEETITNKGLKTGKW
CCCCEEHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCCE
DIAHLNTDWIFDAANEKAVLDLTSFINQNPPQDYPEGWHQSLLNLQHINGSIYGLPFHDG
EEEECCCCEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCC
PECLIYRKDLFEDVTEKENFKKQFGYELFPPKNWEQFTQIASFFNRPESNLSGCVFANYP
CCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCC
DGHNMVFDFCLQLWTRGGSLLDHQNKININHNQAVKALDYYRKIVNNTNAVHPGSKNFGS
CCCHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VEAGMAFAEGQAAMAINWFGFASMCEVIEESKVKGKVDITELPHDENHKTASLNVYWLYT
HHHCCEEECCCEEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEEEEEE
IGIGSKNKALAFDFLRFATTAESDKLLTTEGGIGCRKSTWNDAEINKTIPYYHKLEMLHE
EECCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
NALTLPQTPIWPKVAELIDQMVLKAIETDIPSEKLLEQTQENIEKLTN
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKFRIAVRKFSPFESTLQKLWDNFCLKNNIQIEVEMIPLELHDLYEETITNKGLKTGKW
CCCCEEHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCCE
DIAHLNTDWIFDAANEKAVLDLTSFINQNPPQDYPEGWHQSLLNLQHINGSIYGLPFHDG
EEEECCCCEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCC
PECLIYRKDLFEDVTEKENFKKQFGYELFPPKNWEQFTQIASFFNRPESNLSGCVFANYP
CCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCC
DGHNMVFDFCLQLWTRGGSLLDHQNKININHNQAVKALDYYRKIVNNTNAVHPGSKNFGS
CCCHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VEAGMAFAEGQAAMAINWFGFASMCEVIEESKVKGKVDITELPHDENHKTASLNVYWLYT
HHHCCEEECCCEEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEEEEEE
IGIGSKNKALAFDFLRFATTAESDKLLTTEGGIGCRKSTWNDAEINKTIPYYHKLEMLHE
EECCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
NALTLPQTPIWPKVAELIDQMVLKAIETDIPSEKLLEQTQENIEKLTN
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]