| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is fsr [H]
Identifier: 146301843
GI number: 146301843
Start: 4935470
End: 4936684
Strand: Direct
Name: fsr [H]
Synonym: Fjoh_4107
Alternate gene names: 146301843
Gene position: 4935470-4936684 (Clockwise)
Preceding gene: 146301815
Following gene: 146301844
Centisome position: 80.95
GC content: 34.81
Gene sequence:
>1215_bases ATGGACACTATTAAAGCAAATCCTGACATAGTTAAAAAAACCACTTATTCGATCTTATTTATCATTAGTTTTTCTCATCT AATTAATGATCTTTTACAGGCTGTTGTTCCTTCAATTTATCCGCTTTTAAAAGATAATTTTAGTTTAAGTTTTACTCAAA TTGGTATTATTACTTTGACTTACCAAATGGTAGCGTCTATTTTACAGCCATTTGTGGGAATGTATACCGATAAAAACTCA AAACCATACTCGCTGATTATTGGAATGTGTTTTACAATGGTTGGACTTTTCTTTGTTTCGATCGCTTCGAGTTTTATCAA CTTATTATTATCAGTAAGTTTAATCGGAATCGGATCTTCAATTTTCCATCCAGAATCTTCACGTGTGGCGCATTTGGCTT CTGGCGGAAAAAGAGGTTTGGCGCAGTCTATTTTTCAATTGGGAGGAAATGCAGGAAGTGCGATCGGACCATTATTAGCT GCTTTTATCGTTATTCCGCACGGACAATCTTATATCGCTTGGTTTTGTATTATTGCGTTAGTCGGTGTTTTTGCTTTGTA TAAAATTGCGATTTGGTACACGGCACATTTATCGGAAAGAAATGCCAATAAAGCTTCTCATCAAATTGAAACACATCATT TGTCTAAAAACCGAGTAATTGCTTCGTTGATTATTTTATTGGTTCTGATTTTTTCTAAATATTTCTATATGAGCAGTATT ACGAGTTATTATACTTTCTTCTTGATAGATAAATTCCACATTACGATTCAGCAGTCACAAGTGTATTTATTCTTGTTTTC TGGCGCTGTTGCAGCTGGAACTTTAATTGGCGGACCAATTGGAGATCGATATGGCAGAAAATATGTAATCTGGGTTTCTA TTTTAGGTGTTGCACCGTTTACTTTAATGTTACCTTACGTTTCTTTATTCTGGGTTGGAGCTTTATCTGTAATTATCGGA TTGATTCTTTCATCTGCATTCTCAGCAATTCTAGTTTATGCAACTGAATTAATGCCCGGAAAAGTCGGACTTGTAGCGGG TCTTTTCTTCGGTTTTGCTTTCGGAATGGGCGGTTTAGGTTCTGCTATTTTAGGAAAAATTGCCGATGCTACAAGTATTG AATATGTATTTAAGATTTGTGCATTTCTGCCTTTAATTGGGGTTATTACTGGATTCTTACCTAATTTGGAGAAGAAAAAG AAAGCTCAGGAATAA
Upstream 100 bases:
>100_bases GTCCAAATATAGCAATTCTGACATTACTATTCTTTTAATCTTTGCAAAAAATAATACAGCTGTTGTTTTTTAACCTAATT TAAAAATCAAAAAATATCTC
Downstream 100 bases:
>100_bases TTTTAAACACATAAAAACATAGTATTTGAATTGTCTTTAAAAGGCATTTCATTTCATAATAAAACACATAGTTTTCTCGA TTGAAAGCTATGTGTTTTTT
Product: major facilitator transporter
Products: fosmidomycin [Periplasm]; Proton [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MDTIKANPDIVKKTTYSILFIISFSHLINDLLQAVVPSIYPLLKDNFSLSFTQIGIITLTYQMVASILQPFVGMYTDKNS KPYSLIIGMCFTMVGLFFVSIASSFINLLLSVSLIGIGSSIFHPESSRVAHLASGGKRGLAQSIFQLGGNAGSAIGPLLA AFIVIPHGQSYIAWFCIIALVGVFALYKIAIWYTAHLSERNANKASHQIETHHLSKNRVIASLIILLVLIFSKYFYMSSI TSYYTFFLIDKFHITIQQSQVYLFLFSGAVAAGTLIGGPIGDRYGRKYVIWVSILGVAPFTLMLPYVSLFWVGALSVIIG LILSSAFSAILVYATELMPGKVGLVAGLFFGFAFGMGGLGSAILGKIADATSIEYVFKICAFLPLIGVITGFLPNLEKKK KAQE
Sequences:
>Translated_404_residues MDTIKANPDIVKKTTYSILFIISFSHLINDLLQAVVPSIYPLLKDNFSLSFTQIGIITLTYQMVASILQPFVGMYTDKNS KPYSLIIGMCFTMVGLFFVSIASSFINLLLSVSLIGIGSSIFHPESSRVAHLASGGKRGLAQSIFQLGGNAGSAIGPLLA AFIVIPHGQSYIAWFCIIALVGVFALYKIAIWYTAHLSERNANKASHQIETHHLSKNRVIASLIILLVLIFSKYFYMSSI TSYYTFFLIDKFHITIQQSQVYLFLFSGAVAAGTLIGGPIGDRYGRKYVIWVSILGVAPFTLMLPYVSLFWVGALSVIIG LILSSAFSAILVYATELMPGKVGLVAGLFFGFAFGMGGLGSAILGKIADATSIEYVFKICAFLPLIGVITGFLPNLEKKK KAQE >Mature_404_residues MDTIKANPDIVKKTTYSILFIISFSHLINDLLQAVVPSIYPLLKDNFSLSFTQIGIITLTYQMVASILQPFVGMYTDKNS KPYSLIIGMCFTMVGLFFVSIASSFINLLLSVSLIGIGSSIFHPESSRVAHLASGGKRGLAQSIFQLGGNAGSAIGPLLA AFIVIPHGQSYIAWFCIIALVGVFALYKIAIWYTAHLSERNANKASHQIETHHLSKNRVIASLIILLVLIFSKYFYMSSI TSYYTFFLIDKFHITIQQSQVYLFLFSGAVAAGTLIGGPIGDRYGRKYVIWVSILGVAPFTLMLPYVSLFWVGALSVIIG LILSSAFSAILVYATELMPGKVGLVAGLFFGFAFGMGGLGSAILGKIADATSIEYVFKICAFLPLIGVITGFLPNLEKKK KAQE
Specific function: Confers the resistance against fosmidomycin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786686, Length=388, Percent_Identity=60.5670103092783, Blast_Score=442, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43947; Mature: 43947
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTIKANPDIVKKTTYSILFIISFSHLINDLLQAVVPSIYPLLKDNFSLSFTQIGIITLT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHH YQMVASILQPFVGMYTDKNSKPYSLIIGMCFTMVGLFFVSIASSFINLLLSVSLIGIGSS HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH IFHPESSRVAHLASGGKRGLAQSIFQLGGNAGSAIGPLLAAFIVIPHGQSYIAWFCIIAL HCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH VGVFALYKIAIWYTAHLSERNANKASHQIETHHLSKNRVIASLIILLVLIFSKYFYMSSI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH TSYYTFFLIDKFHITIQQSQVYLFLFSGAVAAGTLIGGPIGDRYGRKYVIWVSILGVAPF HHHHHHHHHHHHEEEEEECEEEEEEECCHHHHHHHHCCCCCHHHCCEEEEEEHHHHHHHH TLMLPYVSLFWVGALSVIIGLILSSAFSAILVYATELMPGKVGLVAGLFFGFAFGMGGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC SAILGKIADATSIEYVFKICAFLPLIGVITGFLPNLEKKKKAQE HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC >Mature Secondary Structure MDTIKANPDIVKKTTYSILFIISFSHLINDLLQAVVPSIYPLLKDNFSLSFTQIGIITLT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHH YQMVASILQPFVGMYTDKNSKPYSLIIGMCFTMVGLFFVSIASSFINLLLSVSLIGIGSS HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH IFHPESSRVAHLASGGKRGLAQSIFQLGGNAGSAIGPLLAAFIVIPHGQSYIAWFCIIAL HCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH VGVFALYKIAIWYTAHLSERNANKASHQIETHHLSKNRVIASLIILLVLIFSKYFYMSSI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH TSYYTFFLIDKFHITIQQSQVYLFLFSGAVAAGTLIGGPIGDRYGRKYVIWVSILGVAPF HHHHHHHHHHHHEEEEEECEEEEEEECCHHHHHHHHCCCCCHHHCCEEEEEEHHHHHHHH TLMLPYVSLFWVGALSVIIGLILSSAFSAILVYATELMPGKVGLVAGLFFGFAFGMGGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC SAILGKIADATSIEYVFKICAFLPLIGVITGFLPNLEKKKKAQE HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: fosmidomycin [Cytoplasm]; Proton [Periplasm] [C]
Specific reaction: fosmidomycin [Cytoplasm] + Proton [Periplasm] = fosmidomycin [Periplasm] + Proton [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8917080; 9278503 [H]