| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301776
Identifier: 146301776
GI number: 146301776
Start: 4820954
End: 4822063
Strand: Direct
Name: 146301776
Synonym: Fjoh_4040
Alternate gene names: NA
Gene position: 4820954-4822063 (Clockwise)
Preceding gene: 146301775
Following gene: 146301777
Centisome position: 79.07
GC content: 33.24
Gene sequence:
>1110_bases ATGAATAAAACGTTTAAGAAAAATATTGGCTTATTACATCTTTGGCTCGGACTTGCGTCCGGGCTCATTGTTTTTATTGT AGCACTTACCGGAAGCATTCTTGTTTTTGAGGACGAAATCGACGAATTTGTAAATCCTGAGTTTTATAAAGTTTCTGAAA TTGGAGCAAAAAAAATACCTACAGACATTTTGATAAGAGATATTGAACTGAAATATGCTCTTAAAAAAATTAATCGTGTT TATGCTTATAACGATCCTGAAAGGACTATGATTGTTACAGGAAAAGACAGCGATAAAAAAAATCAAATCTTTTCTGTTGA TCCTTATACTGGTAAAACATTAGGACAAATTCCTGAAAGAAGCCGATTCTTTTCGGTTGTTTTAGATATACACCGTCATT TGGTTTTAGGTGATATTGGAGCTTTTATTACAGGATGCAGCTGTCTGATATTTGTATTCATGCTCATTTCTGGGATGATT TTATGGTGGCCGAAAAAAGTCAAAAACTTAAAACAGCGATTAACTGTAAAATGGAATGCTTCATTTAAAAGAGTAAACTG GGATTTTCATTCTGTTTTTGGTTTTTATAGTTTTCTTATTCTTCTGATAATTTCCTTAACGGGTTTAACCTGGTCTTTTA AATGGTTTGAAAGCGGTATTTATTTACTGGCAGATGGAACAACAAAAAAACCGTCGGCTAAAGTTGAAAATCCAACCAAA GTTGATCCTAAAGTAGATAAAACCTATTTCTATCAGAACATTTTTTCTAAAACGGACAGCGTTTTTCCATACAAAGGCGA TACACAAATTAGAATTCCATCTGATACCATAAACAGCATTACGGTTATTAAACTGAACTTAGAAGAATCGATTCCAAATA TTTCGAGTACTGCCTATTTTGATAAATACACAGGTAAAATTTTAGAAGCCAGACCTTATGAAAAATTAAGCAGAGGCGAT AAAATCCGACGTTTGATTTATCCTATTCATACTGGAAGCATTTACGGATATCCAACAAAAATCCTGGCTTTTTTAGTCTG CCTTTTTGCCGTAACACTGCCTGTTACCGGCCTTTTAATCTGGCTTGGAAGAAAAAAAAGCAAAAAATAA
Upstream 100 bases:
>100_bases GTTTATTCCCTGGTGCTCCTTCGAACTGGCTGTTAACACTTGGATACTCATTTTAATAAATGCTTTATTTATATTTGAAA ACATTTTTGGACTATCTATT
Downstream 100 bases:
>100_bases ACGGTATTTCTCTATTTGTATAACTAATGACAATTCAGTTAGTTATACAAATAGTTAATTATATTTGACTATAGTATTTA ATTTTTTTTGAAAAGATGGC
Product: PepSY-associated TM helix domain-containing protein
Products: NA
Alternate protein names: PepSY-Associated TM Helix Domain-Containing Protein; Flavodoxin/Nitric Oxide Synthase; Sulfite Reductase Flavoprotein Component; Iron-Uptake Factor; Iron-Regulated Membrane Protein; Iron-Regulated Transmembrane Protein; Sulfite Reductase; Sulfite Reductase Flavoprotein Alpha-Component; PepSY-Associated TM Helix Family; Transmembrane Protein; PepSY-Associated TM Helix; Iron Uptake Protein; NB-Dependent Receptor Plug; Oxidoreductase; Sulfite Reductase Alpha Subunit; Cytoplasmic Membrane Protein; Bifunctional Protein Flavoprotein Alpha-Component; Transporter-Like Membrane Protein; Bifunctional Sulfite Reductase; PepSY-Associated TM Helix Family Protein; Protein Containing PepSY-Associated TM Helix; Sulfite Reductase/Membrane Protein; Iron Uptake Factor
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MNKTFKKNIGLLHLWLGLASGLIVFIVALTGSILVFEDEIDEFVNPEFYKVSEIGAKKIPTDILIRDIELKYALKKINRV YAYNDPERTMIVTGKDSDKKNQIFSVDPYTGKTLGQIPERSRFFSVVLDIHRHLVLGDIGAFITGCSCLIFVFMLISGMI LWWPKKVKNLKQRLTVKWNASFKRVNWDFHSVFGFYSFLILLIISLTGLTWSFKWFESGIYLLADGTTKKPSAKVENPTK VDPKVDKTYFYQNIFSKTDSVFPYKGDTQIRIPSDTINSITVIKLNLEESIPNISSTAYFDKYTGKILEARPYEKLSRGD KIRRLIYPIHTGSIYGYPTKILAFLVCLFAVTLPVTGLLIWLGRKKSKK
Sequences:
>Translated_369_residues MNKTFKKNIGLLHLWLGLASGLIVFIVALTGSILVFEDEIDEFVNPEFYKVSEIGAKKIPTDILIRDIELKYALKKINRV YAYNDPERTMIVTGKDSDKKNQIFSVDPYTGKTLGQIPERSRFFSVVLDIHRHLVLGDIGAFITGCSCLIFVFMLISGMI LWWPKKVKNLKQRLTVKWNASFKRVNWDFHSVFGFYSFLILLIISLTGLTWSFKWFESGIYLLADGTTKKPSAKVENPTK VDPKVDKTYFYQNIFSKTDSVFPYKGDTQIRIPSDTINSITVIKLNLEESIPNISSTAYFDKYTGKILEARPYEKLSRGD KIRRLIYPIHTGSIYGYPTKILAFLVCLFAVTLPVTGLLIWLGRKKSKK >Mature_369_residues MNKTFKKNIGLLHLWLGLASGLIVFIVALTGSILVFEDEIDEFVNPEFYKVSEIGAKKIPTDILIRDIELKYALKKINRV YAYNDPERTMIVTGKDSDKKNQIFSVDPYTGKTLGQIPERSRFFSVVLDIHRHLVLGDIGAFITGCSCLIFVFMLISGMI LWWPKKVKNLKQRLTVKWNASFKRVNWDFHSVFGFYSFLILLIISLTGLTWSFKWFESGIYLLADGTTKKPSAKVENPTK VDPKVDKTYFYQNIFSKTDSVFPYKGDTQIRIPSDTINSITVIKLNLEESIPNISSTAYFDKYTGKILEARPYEKLSRGD KIRRLIYPIHTGSIYGYPTKILAFLVCLFAVTLPVTGLLIWLGRKKSKK
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42248; Mature: 42248
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTFKKNIGLLHLWLGLASGLIVFIVALTGSILVFEDEIDEFVNPEFYKVSEIGAKKIP CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHCCCCEEEHHHCCCHHCC TDILIRDIELKYALKKINRVYAYNDPERTMIVTGKDSDKKNQIFSVDPYTGKTLGQIPER HHHEEEHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCEEEECCCCCCHHHCCCCH SRFFSVVLDIHRHLVLGDIGAFITGCSCLIFVFMLISGMILWWPKKVKNLKQRLTVKWNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHEEEEECC SFKRVNWDFHSVFGFYSFLILLIISLTGLTWSFKWFESGIYLLADGTTKKPSAKVENPTK CEEEECCHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHCCEEEEECCCCCCCCCCCCCCCC VDPKVDKTYFYQNIFSKTDSVFPYKGDTQIRIPSDTINSITVIKLNLEESIPNISSTAYF CCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCEEEEEEEHHHCCCCCCCHHHH DKYTGKILEARPYEKLSRGDKIRRLIYPIHTGSIYGYPTKILAFLVCLFAVTLPVTGLLI HHHCCCEECCCCHHHHHCCHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH WLGRKKSKK EECCCCCCC >Mature Secondary Structure MNKTFKKNIGLLHLWLGLASGLIVFIVALTGSILVFEDEIDEFVNPEFYKVSEIGAKKIP CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHCCCCEEEHHHCCCHHCC TDILIRDIELKYALKKINRVYAYNDPERTMIVTGKDSDKKNQIFSVDPYTGKTLGQIPER HHHEEEHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCEEEECCCCCCHHHCCCCH SRFFSVVLDIHRHLVLGDIGAFITGCSCLIFVFMLISGMILWWPKKVKNLKQRLTVKWNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHEEEEECC SFKRVNWDFHSVFGFYSFLILLIISLTGLTWSFKWFESGIYLLADGTTKKPSAKVENPTK CEEEECCHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHCCEEEEECCCCCCCCCCCCCCCC VDPKVDKTYFYQNIFSKTDSVFPYKGDTQIRIPSDTINSITVIKLNLEESIPNISSTAYF CCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCEEEEEEEHHHCCCCCCCHHHH DKYTGKILEARPYEKLSRGDKIRRLIYPIHTGSIYGYPTKILAFLVCLFAVTLPVTGLLI HHHCCCEECCCCHHHHHCCHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH WLGRKKSKK EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA