| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301774
Identifier: 146301774
GI number: 146301774
Start: 4817441
End: 4818304
Strand: Direct
Name: 146301774
Synonym: Fjoh_4038
Alternate gene names: NA
Gene position: 4817441-4818304 (Clockwise)
Preceding gene: 146301773
Following gene: 146301775
Centisome position: 79.01
GC content: 32.18
Gene sequence:
>864_bases ATGAAAAAATCATATATTTTATTGCACATCGCTGTAATACTTGCCGGTTTTACTGGTGTTTTTGGTAAACTTATTTCGTT AAACGAAGGACTTTTAGTCTGGTACCGGGTTTTATTTTCTTCCTTGGTTTTATTGGTTATCCTGAAATTATTTAAGGTTT CAAAGGATATTTCTTTAAGAGAAAAATTCAATATTGCCAAAATTGGTCTTTTGATCACGATACACTGGATTTTCTTTTAT GCCAGTATTAAATATTCAAATATTTCTGTGGGTGTTGTATGTTATTGTTTAACGAGTTTATTTACTGCCTTGTTCGCTCC GCTGATTAACAGAAAGAAATTTAATATTACAGAATTACTGCTTAGCATGCTGACTCTGGCCGGAATTGCTCTTATATTCC ACTTTGATTCTTCTTATCAATTAGGCATTATTCTGGGTATAATTTCATCTGCTTTTGCGGCGCTTTATACCATTTTTAAC GAACGATTGGTAACTATTTACGACAGCAGGCTTATCAACTATTATCAAATGAATGGCGGCACGATCGGGCTTGGTCTGCT TATGCCTTTATATCTTTATTTCTTTCCTGTTGAAAGTATTCTGCCAAGTGTAAAAGATATTTTCTATCTGATTATTTTGG CAGTATTCTGCACCGTTGGTTTATATGTTTTGTTTGCAGAATCATTAAAAAAGATTGCAGCATTTACTGTAAACCTTACT TTCAACCTAGAACCGGTTTATGCAATTATAATGGCTTTTTTGTTTTTTAATGAAAGTAAAGAAGTCAATATCTTCTTTTA CATAGGACTACTTTTTGTTATCGCTTCGGTAATATCGCAAACAATAATTTCTATTCGAAAATAA
Upstream 100 bases:
>100_bases GTTTCATACCGATATTTTTATCGGCAGATTCTGCTATGCTTACAAGTCAAATTTTAAATTAATTTATAATTCAGTCTTTT TTAGACTTTTAGACAATCTT
Downstream 100 bases:
>100_bases AAAAAAACATAGGCCTCTTGCATTTTTGTAAGAGGCTTATTTCAATTCAAACTTCACTATATCGATTTCTTAAAATTAAT ATGAATTGTGATAGTTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MKKSYILLHIAVILAGFTGVFGKLISLNEGLLVWYRVLFSSLVLLVILKLFKVSKDISLREKFNIAKIGLLITIHWIFFY ASIKYSNISVGVVCYCLTSLFTALFAPLINRKKFNITELLLSMLTLAGIALIFHFDSSYQLGIILGIISSAFAALYTIFN ERLVTIYDSRLINYYQMNGGTIGLGLLMPLYLYFFPVESILPSVKDIFYLIILAVFCTVGLYVLFAESLKKIAAFTVNLT FNLEPVYAIIMAFLFFNESKEVNIFFYIGLLFVIASVISQTIISIRK
Sequences:
>Translated_287_residues MKKSYILLHIAVILAGFTGVFGKLISLNEGLLVWYRVLFSSLVLLVILKLFKVSKDISLREKFNIAKIGLLITIHWIFFY ASIKYSNISVGVVCYCLTSLFTALFAPLINRKKFNITELLLSMLTLAGIALIFHFDSSYQLGIILGIISSAFAALYTIFN ERLVTIYDSRLINYYQMNGGTIGLGLLMPLYLYFFPVESILPSVKDIFYLIILAVFCTVGLYVLFAESLKKIAAFTVNLT FNLEPVYAIIMAFLFFNESKEVNIFFYIGLLFVIASVISQTIISIRK >Mature_287_residues MKKSYILLHIAVILAGFTGVFGKLISLNEGLLVWYRVLFSSLVLLVILKLFKVSKDISLREKFNIAKIGLLITIHWIFFY ASIKYSNISVGVVCYCLTSLFTALFAPLINRKKFNITELLLSMLTLAGIALIFHFDSSYQLGIILGIISSAFAALYTIFN ERLVTIYDSRLINYYQMNGGTIGLGLLMPLYLYFFPVESILPSVKDIFYLIILAVFCTVGLYVLFAESLKKIAAFTVNLT FNLEPVYAIIMAFLFFNESKEVNIFFYIGLLFVIASVISQTIISIRK
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32468; Mature: 32468
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSYILLHIAVILAGFTGVFGKLISLNEGLLVWYRVLFSSLVLLVILKLFKVSKDISLR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH EKFNIAKIGLLITIHWIFFYASIKYSNISVGVVCYCLTSLFTALFAPLINRKKFNITELL HHCCHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LSMLTLAGIALIFHFDSSYQLGIILGIISSAFAALYTIFNERLVTIYDSRLINYYQMNGG HHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHEEHHHHHHHEEEECCC TIGLGLLMPLYLYFFPVESILPSVKDIFYLIILAVFCTVGLYVLFAESLKKIAAFTVNLT EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE FNLEPVYAIIMAFLFFNESKEVNIFFYIGLLFVIASVISQTIISIRK ECCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKSYILLHIAVILAGFTGVFGKLISLNEGLLVWYRVLFSSLVLLVILKLFKVSKDISLR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH EKFNIAKIGLLITIHWIFFYASIKYSNISVGVVCYCLTSLFTALFAPLINRKKFNITELL HHCCHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LSMLTLAGIALIFHFDSSYQLGIILGIISSAFAALYTIFNERLVTIYDSRLINYYQMNGG HHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHEEHHHHHHHEEEECCC TIGLGLLMPLYLYFFPVESILPSVKDIFYLIILAVFCTVGLYVLFAESLKKIAAFTVNLT EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE FNLEPVYAIIMAFLFFNESKEVNIFFYIGLLFVIASVISQTIISIRK ECCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA