| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301770
Identifier: 146301770
GI number: 146301770
Start: 4812392
End: 4812877
Strand: Reverse
Name: 146301770
Synonym: Fjoh_4032
Alternate gene names: NA
Gene position: 4812877-4812392 (Counterclockwise)
Preceding gene: 146301771
Following gene: 146301769
Centisome position: 78.94
GC content: 34.77
Gene sequence:
>486_bases ATGAATATAATAGACGAATCAGGAATATTAGCCATCTCGACACGATTGCAACGATTAAGCGAACAATTGAGAAAAGACGG TGCTTTGTTTTATAAATCATACGGAATTGATTTTGAGCCTAAATGGTTTCCGGTTATTTATACTTTATATCATAAAGAAA CTTTGAGTGTTGTTGAAATTGCTAACGAAATTGGCTATACACATCCATCGACCATAAGTCTGCTCAAAGAACTCGAAAAA CAAAAACTGATTCGTTCTAAAAAAGATAAAATTGACGAACGCAAAAGACTCATTCAGCTTACAGCAAAAGGACAAGAACT AATCGAACAAATGAAACCCGTTTGGGATGTTATGAAACAAGCCTTAAGTGATATAGCCGATAATCAAAACAATCTGCTTC AGGCAATTAATGAAGCCGAAAATAAAATTGTACACCAAAGTTTTTTACAGCGTGCTTTGCAGTTGAAAAGCGAAGGGGAG AAGTAA
Upstream 100 bases:
>100_bases AGAATAATTTTGTGCGAATCCAGAAAGAAAAACTTCCGGAAGGATTTCCTTTAATGGCGCCAGACAATGTTTTCTGCCAT TTAAATTTAAAAAAATAAAG
Downstream 100 bases:
>100_bases TATTTAAAATGTAAAAATATTACTACTTTTTAATTGCTGTTTTACTTAAGCTTTAGTAATATTGCAGCAAAAAAATTGAT CAATATTGATATTTATTATA
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Gcn5-Related N-Acetyltransferase; Transcriptional Regulator MarR Family Protein
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MNIIDESGILAISTRLQRLSEQLRKDGALFYKSYGIDFEPKWFPVIYTLYHKETLSVVEIANEIGYTHPSTISLLKELEK QKLIRSKKDKIDERKRLIQLTAKGQELIEQMKPVWDVMKQALSDIADNQNNLLQAINEAENKIVHQSFLQRALQLKSEGE K
Sequences:
>Translated_161_residues MNIIDESGILAISTRLQRLSEQLRKDGALFYKSYGIDFEPKWFPVIYTLYHKETLSVVEIANEIGYTHPSTISLLKELEK QKLIRSKKDKIDERKRLIQLTAKGQELIEQMKPVWDVMKQALSDIADNQNNLLQAINEAENKIVHQSFLQRALQLKSEGE K >Mature_161_residues MNIIDESGILAISTRLQRLSEQLRKDGALFYKSYGIDFEPKWFPVIYTLYHKETLSVVEIANEIGYTHPSTISLLKELEK QKLIRSKKDKIDERKRLIQLTAKGQELIEQMKPVWDVMKQALSDIADNQNNLLQAINEAENKIVHQSFLQRALQLKSEGE K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18670; Mature: 18670
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIIDESGILAISTRLQRLSEQLRKDGALFYKSYGIDFEPKWFPVIYTLYHKETLSVVEI CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH ANEIGYTHPSTISLLKELEKQKLIRSKKDKIDERKRLIQLTAKGQELIEQMKPVWDVMKQ HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSDIADNQNNLLQAINEAENKIVHQSFLQRALQLKSEGEK HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNIIDESGILAISTRLQRLSEQLRKDGALFYKSYGIDFEPKWFPVIYTLYHKETLSVVEI CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH ANEIGYTHPSTISLLKELEKQKLIRSKKDKIDERKRLIQLTAKGQELIEQMKPVWDVMKQ HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSDIADNQNNLLQAINEAENKIVHQSFLQRALQLKSEGEK HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA