| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301743
Identifier: 146301743
GI number: 146301743
Start: 4787300
End: 4788343
Strand: Reverse
Name: 146301743
Synonym: Fjoh_4005
Alternate gene names: NA
Gene position: 4788343-4787300 (Counterclockwise)
Preceding gene: 146301744
Following gene: 146301742
Centisome position: 78.54
GC content: 36.88
Gene sequence:
>1044_bases ATGAAGAAATTAGCTGATAATCAACTAATAAAAAAAATAATTATGAAAACGATAGCAAAAATCAAAAACAGTATTACAAA CGCAGTTCTTTTAATCGCCTTTCTTTTAGTAAACGCATCTGCAATTGCACAAACAGAAAAACAAGATGGTTCACTAGGAA CTTTAAAACAAATCAATGCCGGATTATTAAATGTAGGATATACCGAAGCCGGCCCATCTAACGGAACTCCGGTAATCTTA CTTCACGGCTGGCCTTATGACATTCACAGCTACAATGAAGTAGTGCCAATTTTAGTTTCAAAAGGTTATCATGTATTTAC ACCTTATTTAAGAGGTTCAGGAACAACAACCTTCCTTTCTAAAGATACTTTCAGAAACGGACAGCAGGCAGCATTAGCAA CGGATATTATTGCTTTTATGGATGCTTTAAAAATCGACAAAGCCGTAGTTGGAGGATTCGATTGGGGAGCTAGAACAGCA GTTGTTATGGCAGCACTTTGGCCGGAACGCATAAAAGGTTTGGTTTCGGTAAGTGGATATTTAGTAGTGAATTTAGAAGC TAATTTAAAACCATTGCCTCCAAAAGCAGAACTTGGATGGTGGTACCAATATTATTTTGCAACCGAAAGAGGTAAACTAG GCTACAGCCAAAATACTTACGAATTCAACAAACAAATCTGGCAGATTGCTTCTCCATTATGGAATTTTGACAAAGCGACT TACGACCAAACAGCACAGTCATTTAACAATTCGGATCACGTAGCAATCGTAATTCACAATTACAGATGGAGACAATCTCT GGAAGCAGGAGAATCTAAATATGATGCTTTAGAAAAACGTCTTGCAGCAAGACCAGAAATTAAAGTACCAACCATTACAA TAGGAAGTGATTTTGACGGTGCTTTCGCAGATGGAAAAGCCTATGCTAATAAATTCACAGGAAAATATGCTCACAGAATC CTAAAAGGAATAGGACACAATGTGCCACAAGAAGATCCAAAATCTTTTGCACAAGCAATTATTGAAGTAGATGGGATGAA ATAA
Upstream 100 bases:
>100_bases AATTCAAAACTCATAACCAAACAACTGTCCATTTCACCTTTTACTTTGTCCACTTCGACTTTTTTCTCCTTTTAAAACGA GGATTGCCAAGATACCTTTG
Downstream 100 bases:
>100_bases ATATCAATTCAATGTCAATGACAATTTCAAAAATCAATTAAAATAATCTAAAATCAACAATCTAAAATCTAAAATCTAAA ATTATTATGAGCACAAAAGT
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Epoxide Hydrolase; Epoxide Hydrolase Protein; Alpha/Beta Hydrolase; Hydrolase; Alpha/Beta Family Hydrolase; Twin-Arginine Translocation Pathway Signal; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold; Hydrolase Alpha/Beta Fold Family; Dehalogenase/Hydrolase; S33 Family Peptidase; Alpha/Beta Hydrolase Fold Family; Alpha/Beta Hydrolase Superfamily Protein; Epoxide Hydrolase EphB; Alpha/Beta Hydrolase Superfamily Hydrolase/Acyltransferase; Hydrolase Or Acyltransferase; Alpha/Beta Fold Hydrolase; Epoxide Hydrolase EphA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MKKLADNQLIKKIIMKTIAKIKNSITNAVLLIAFLLVNASAIAQTEKQDGSLGTLKQINAGLLNVGYTEAGPSNGTPVIL LHGWPYDIHSYNEVVPILVSKGYHVFTPYLRGSGTTTFLSKDTFRNGQQAALATDIIAFMDALKIDKAVVGGFDWGARTA VVMAALWPERIKGLVSVSGYLVVNLEANLKPLPPKAELGWWYQYYFATERGKLGYSQNTYEFNKQIWQIASPLWNFDKAT YDQTAQSFNNSDHVAIVIHNYRWRQSLEAGESKYDALEKRLAARPEIKVPTITIGSDFDGAFADGKAYANKFTGKYAHRI LKGIGHNVPQEDPKSFAQAIIEVDGMK
Sequences:
>Translated_347_residues MKKLADNQLIKKIIMKTIAKIKNSITNAVLLIAFLLVNASAIAQTEKQDGSLGTLKQINAGLLNVGYTEAGPSNGTPVIL LHGWPYDIHSYNEVVPILVSKGYHVFTPYLRGSGTTTFLSKDTFRNGQQAALATDIIAFMDALKIDKAVVGGFDWGARTA VVMAALWPERIKGLVSVSGYLVVNLEANLKPLPPKAELGWWYQYYFATERGKLGYSQNTYEFNKQIWQIASPLWNFDKAT YDQTAQSFNNSDHVAIVIHNYRWRQSLEAGESKYDALEKRLAARPEIKVPTITIGSDFDGAFADGKAYANKFTGKYAHRI LKGIGHNVPQEDPKSFAQAIIEVDGMK >Mature_347_residues MKKLADNQLIKKIIMKTIAKIKNSITNAVLLIAFLLVNASAIAQTEKQDGSLGTLKQINAGLLNVGYTEAGPSNGTPVIL LHGWPYDIHSYNEVVPILVSKGYHVFTPYLRGSGTTTFLSKDTFRNGQQAALATDIIAFMDALKIDKAVVGGFDWGARTA VVMAALWPERIKGLVSVSGYLVVNLEANLKPLPPKAELGWWYQYYFATERGKLGYSQNTYEFNKQIWQIASPLWNFDKAT YDQTAQSFNNSDHVAIVIHNYRWRQSLEAGESKYDALEKRLAARPEIKVPTITIGSDFDGAFADGKAYANKFTGKYAHRI LKGIGHNVPQEDPKSFAQAIIEVDGMK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38451; Mature: 38451
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLADNQLIKKIIMKTIAKIKNSITNAVLLIAFLLVNASAIAQTEKQDGSLGTLKQINA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCC GLLNVGYTEAGPSNGTPVILLHGWPYDIHSYNEVVPILVSKGYHVFTPYLRGSGTTTFLS CEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEHEEECCCEEEECEECCCCCEEEEE KDTFRNGQQAALATDIIAFMDALKIDKAVVGGFDWGARTAVVMAALWPERIKGLVSVSGY CHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHEECCE LVVNLEANLKPLPPKAELGWWYQYYFATERGKLGYSQNTYEFNKQIWQIASPLWNFDKAT EEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH YDQTAQSFNNSDHVAIVIHNYRWRQSLEAGESKYDALEKRLAARPEIKVPTITIGSDFDG HHHHHHHCCCCCCEEEEEECCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCC AFADGKAYANKFTGKYAHRILKGIGHNVPQEDPKSFAQAIIEVDGMK CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MKKLADNQLIKKIIMKTIAKIKNSITNAVLLIAFLLVNASAIAQTEKQDGSLGTLKQINA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCC GLLNVGYTEAGPSNGTPVILLHGWPYDIHSYNEVVPILVSKGYHVFTPYLRGSGTTTFLS CEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEHEEECCCEEEECEECCCCCEEEEE KDTFRNGQQAALATDIIAFMDALKIDKAVVGGFDWGARTAVVMAALWPERIKGLVSVSGY CHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHEECCE LVVNLEANLKPLPPKAELGWWYQYYFATERGKLGYSQNTYEFNKQIWQIASPLWNFDKAT EEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH YDQTAQSFNNSDHVAIVIHNYRWRQSLEAGESKYDALEKRLAARPEIKVPTITIGSDFDG HHHHHHHCCCCCCEEEEEECCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCC AFADGKAYANKFTGKYAHRILKGIGHNVPQEDPKSFAQAIIEVDGMK CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA