| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301734
Identifier: 146301734
GI number: 146301734
Start: 4779069
End: 4779623
Strand: Reverse
Name: 146301734
Synonym: Fjoh_3996
Alternate gene names: NA
Gene position: 4779623-4779069 (Counterclockwise)
Preceding gene: 146301735
Following gene: 146301733
Centisome position: 78.39
GC content: 33.15
Gene sequence:
>555_bases ATGGAAACAATAAATTTTAATATCGTAAGCTCAAACAGCAGCGTAGAATGGACTGGCAGAAAAGTTACCGGTGCTCATAA TGGTACAATTGGTATCAAAAAAGGTAATTTCATCTTTAATGATGGAAAAATAAAAGGAGGAAACATTGTTATCGATACAG CCTCTATCAAAATTCTGGACGTTACAGATGCGGCAACAAATGCTCAGTTTGCAGGACATTTGGCTTCAGATGATTTTTTC TCTATCGAAAAATTCCCAACTGCTTCTTTTGATGTTTTAAGTGTAAAAGAAATATCAAACACTGTTTATTTCCTGGAAGG AAACCTGACCATAAAAGATATTACACATCTTGTGGGTTTTGAAGCTGAAATAAAAAACATCAGTAATAGTATTTCACTTT CAGGGAAATTAATTATAGATCGTACAAAATACGATATCAAATTTCGTTCAGGAAATTTCTTCAAAGATTTGGGAGACACT TTAATCTACAACGACTTTGAGCTTGATTTTAATATCACAGCCGAAGCCGTTTTTTCAGGACAATCTAAAAACTAA
Upstream 100 bases:
>100_bases CTTAGAACCTCAAACCTAAAAAAAACGAATGTGATCTACATCACCTAACCCATTTCTATAACCGCCGTTCCTTTGTATTG TACTTTTAAATACAATAAAA
Downstream 100 bases:
>100_bases TTATCATGCCTTACGTAAAAATCGAATTGACCCGCGAAGGAGTAACACGCGGGCAAAAACAAGAATTAATCAGCGGTATT ACCAATCTGATTACAGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: YCE I Like Family Protein; Ycei Family Protein; YceI Like Family Protein; Membrane Or Secreted YceI-Like Family Protein; Rhodanese-Like Domain Protein; Rhodanese Domain-Containing Protein; Rhodanese-Like Domain-Containing Protein
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues METINFNIVSSNSSVEWTGRKVTGAHNGTIGIKKGNFIFNDGKIKGGNIVIDTASIKILDVTDAATNAQFAGHLASDDFF SIEKFPTASFDVLSVKEISNTVYFLEGNLTIKDITHLVGFEAEIKNISNSISLSGKLIIDRTKYDIKFRSGNFFKDLGDT LIYNDFELDFNITAEAVFSGQSKN
Sequences:
>Translated_184_residues METINFNIVSSNSSVEWTGRKVTGAHNGTIGIKKGNFIFNDGKIKGGNIVIDTASIKILDVTDAATNAQFAGHLASDDFF SIEKFPTASFDVLSVKEISNTVYFLEGNLTIKDITHLVGFEAEIKNISNSISLSGKLIIDRTKYDIKFRSGNFFKDLGDT LIYNDFELDFNITAEAVFSGQSKN >Mature_184_residues METINFNIVSSNSSVEWTGRKVTGAHNGTIGIKKGNFIFNDGKIKGGNIVIDTASIKILDVTDAATNAQFAGHLASDDFF SIEKFPTASFDVLSVKEISNTVYFLEGNLTIKDITHLVGFEAEIKNISNSISLSGKLIIDRTKYDIKFRSGNFFKDLGDT LIYNDFELDFNITAEAVFSGQSKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20194; Mature: 20194
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METINFNIVSSNSSVEWTGRKVTGAHNGTIGIKKGNFIFNDGKIKGGNIVIDTASIKILD CCEEEEEEEECCCCEEEECEEEECCCCCEEEEEECCEEEECCEEECCCEEEEECEEEEEE VTDAATNAQFAGHLASDDFFSIEKFPTASFDVLSVKEISNTVYFLEGNLTIKDITHLVGF ECCCCCCCEEEEEECCCCCEEEECCCCCCEEEEEEEECCCEEEEEECCEEHHHHHHHHCC EAEIKNISNSISLSGKLIIDRTKYDIKFRSGNFFKDLGDTLIYNDFELDFNITAEAVFSG HHHHHCCCCCEEECEEEEEEECEEEEEECCCCCHHHCCCEEEEEEEEEEEEEEEEEEECC QSKN CCCC >Mature Secondary Structure METINFNIVSSNSSVEWTGRKVTGAHNGTIGIKKGNFIFNDGKIKGGNIVIDTASIKILD CCEEEEEEEECCCCEEEECEEEECCCCCEEEEEECCEEEECCEEECCCEEEEECEEEEEE VTDAATNAQFAGHLASDDFFSIEKFPTASFDVLSVKEISNTVYFLEGNLTIKDITHLVGF ECCCCCCCEEEEEECCCCCEEEECCCCCCEEEEEEEECCCEEEEEECCEEHHHHHHHHCC EAEIKNISNSISLSGKLIIDRTKYDIKFRSGNFFKDLGDTLIYNDFELDFNITAEAVFSG HHHHHCCCCCEEECEEEEEEECEEEEEECCCCCHHHCCCEEEEEEEEEEEEEEEEEEECC QSKN CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA