| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is metI [H]
Identifier: 146301723
GI number: 146301723
Start: 4769170
End: 4769823
Strand: Reverse
Name: metI [H]
Synonym: Fjoh_3985
Alternate gene names: 146301723
Gene position: 4769823-4769170 (Counterclockwise)
Preceding gene: 146301724
Following gene: 146301722
Centisome position: 78.23
GC content: 39.76
Gene sequence:
>654_bases ATGTCTGATTCACTTATTGACTTATTAGTAAAAGGAACCTGGGAAACCATTGTGATGACATTTGTGTCAGGCTTTTTTGG TTTTCTAATCGGACTTCCAACGGGAGTTTTGCTTTTCCTTACCCGAAAAAATCAAATATTGGAACAAAAGGTTTTAAACA GAATTTTGTCTGTTGTGGTAAACGTTTTCCGTTCTATTCCGTTTATTATTTTAATCGTTTGGATGATTCCGTTTACACGC GCTATCGTGGGAACTTCGATTGGTGTAAGTGCCGCTTTGGTTCCGTTGAGCATTGGCGCGGCACCATTTATTGCCCGTTT GGTTGAGAACAGTTTATTGGGACTTCCGTCAGGATTAATTGAAGCGGCAAGAGCTTTAGGTGCAACACCTTTCCAGATTG TATATAAAGTATTACTTCCAGAAGCATTGCCTTCATTAATAAATGCAGCATCGATTACTTTAATTACCCTTGTAGGTTAT TCTGCAATGGGCGGAGCAGTAGGCGCAGGAGGTTTAGGACAAGTAGGATATCAGTATGGCTATATTGGTTATGATGCCTT AACAATGAATTCGGTTTTGGCTTTGCTGGTGCTATTAGTATTTCTTATCCAATTTGCGGGAGATGCTTTGTCAAAGCGAT TTGACCACAGATAA
Upstream 100 bases:
>100_bases TTTGGTGTTATGCTGATTGAATTATCAGGAAAACGCGAAAACTACGACGCTGCGATTCAATATTTTATTTCAAAACACAT TAAAACAGAAATTATAGGTT
Downstream 100 bases:
>100_bases TCTCAATTATAATTAACAATTTACAATAAAAATATATGAAACGTACTATTTTAAAAACGGCTGGAGTTTTGGCTTTGGCA CTTGTTTTATCAAACTGCGG
Product: DL-methionine transporter permease subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSDSLIDLLVKGTWETIVMTFVSGFFGFLIGLPTGVLLFLTRKNQILEQKVLNRILSVVVNVFRSIPFIILIVWMIPFTR AIVGTSIGVSAALVPLSIGAAPFIARLVENSLLGLPSGLIEAARALGATPFQIVYKVLLPEALPSLINAASITLITLVGY SAMGGAVGAGGLGQVGYQYGYIGYDALTMNSVLALLVLLVFLIQFAGDALSKRFDHR
Sequences:
>Translated_217_residues MSDSLIDLLVKGTWETIVMTFVSGFFGFLIGLPTGVLLFLTRKNQILEQKVLNRILSVVVNVFRSIPFIILIVWMIPFTR AIVGTSIGVSAALVPLSIGAAPFIARLVENSLLGLPSGLIEAARALGATPFQIVYKVLLPEALPSLINAASITLITLVGY SAMGGAVGAGGLGQVGYQYGYIGYDALTMNSVLALLVLLVFLIQFAGDALSKRFDHR >Mature_216_residues SDSLIDLLVKGTWETIVMTFVSGFFGFLIGLPTGVLLFLTRKNQILEQKVLNRILSVVVNVFRSIPFIILIVWMIPFTRA IVGTSIGVSAALVPLSIGAAPFIARLVENSLLGLPSGLIEAARALGATPFQIVYKVLLPEALPSLINAASITLITLVGYS AMGGAVGAGGLGQVGYQYGYIGYDALTMNSVLALLVLLVFLIQFAGDALSKRFDHR
Specific function: Part of the binding-protein-dependent transport system for D-methionine and the toxic methionine analog alpha-methyl- methionine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG2011
COG function: function code P; ABC-type metal ion transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786397, Length=217, Percent_Identity=71.4285714285714, Blast_Score=273, Evalue=7e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 23128; Mature: 22997
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSLIDLLVKGTWETIVMTFVSGFFGFLIGLPTGVLLFLTRKNQILEQKVLNRILSVVV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVFRSIPFIILIVWMIPFTRAIVGTSIGVSAALVPLSIGAAPFIARLVENSLLGLPSGLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHH EAARALGATPFQIVYKVLLPEALPSLINAASITLITLVGYSAMGGAVGAGGLGQVGYQYG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC YIGYDALTMNSVLALLVLLVFLIQFAGDALSKRFDHR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDSLIDLLVKGTWETIVMTFVSGFFGFLIGLPTGVLLFLTRKNQILEQKVLNRILSVVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVFRSIPFIILIVWMIPFTRAIVGTSIGVSAALVPLSIGAAPFIARLVENSLLGLPSGLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHH EAARALGATPFQIVYKVLLPEALPSLINAASITLITLVGYSAMGGAVGAGGLGQVGYQYG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC YIGYDALTMNSVLALLVLLVFLIQFAGDALSKRFDHR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]