| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146301700
Identifier: 146301700
GI number: 146301700
Start: 4733319
End: 4733723
Strand: Reverse
Name: 146301700
Synonym: Fjoh_3962
Alternate gene names: NA
Gene position: 4733723-4733319 (Counterclockwise)
Preceding gene: 146301701
Following gene: 146301699
Centisome position: 77.64
GC content: 33.83
Gene sequence:
>405_bases ATGTTGAGTCAAATTAAAAATAGTATTTTATGTAAATGCCTTCAGGCGTTGCTGATCGGCTATTTTTTAATGAGCAGTAT TAACGTATCAGGCACCTTCGGAAGAATTATAAATAATAATACCGAAACACATTCTGTTAAAGGAATGACTTGTAATTTTT TAAAGAAAATTTTTAAATGCGACGGTATTCCCGAAGAACTGGATGATTACGAAACAAAAGATACCAAAACTACAAAACTT GCCAAAGGGATTCCGTTATTAGAATATCTTGTTCCGGCTCATACCACACTGGCTGGTTATAGTTTTCAGCTGCAGGCTAA AGAAAAAAATTACATAGACAATTCTGTTTTTTCGTTTGGGTTTCATGGCAAAATTGATATACCGCCTCCACGAGTTATCA TATAA
Upstream 100 bases:
>100_bases AAATAACAGCATCAGTACCCAAAATACCCAAATTCTAATGTTATTTTAATGTAGCACCCAAGATTTCGTTCTAACTTGCG CCCCTTTAAGGATTGGAAAA
Downstream 100 bases:
>100_bases ATACTTAATTTTGTAAGGATTAGACTTTTTTTTGTAATCCTTAATATGGTTTTTACCGTATATTAATATCTATCTATTAA TCTTGTATTTATATATAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MLSQIKNSILCKCLQALLIGYFLMSSINVSGTFGRIINNNTETHSVKGMTCNFLKKIFKCDGIPEELDDYETKDTKTTKL AKGIPLLEYLVPAHTTLAGYSFQLQAKEKNYIDNSVFSFGFHGKIDIPPPRVII
Sequences:
>Translated_134_residues MLSQIKNSILCKCLQALLIGYFLMSSINVSGTFGRIINNNTETHSVKGMTCNFLKKIFKCDGIPEELDDYETKDTKTTKL AKGIPLLEYLVPAHTTLAGYSFQLQAKEKNYIDNSVFSFGFHGKIDIPPPRVII >Mature_134_residues MLSQIKNSILCKCLQALLIGYFLMSSINVSGTFGRIINNNTETHSVKGMTCNFLKKIFKCDGIPEELDDYETKDTKTTKL AKGIPLLEYLVPAHTTLAGYSFQLQAKEKNYIDNSVFSFGFHGKIDIPPPRVII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15009; Mature: 15009
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSQIKNSILCKCLQALLIGYFLMSSINVSGTFGRIINNNTETHSVKGMTCNFLKKIFKC CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEECCCCHHHHHHHHHC DGIPEELDDYETKDTKTTKLAKGIPLLEYLVPAHTTLAGYSFQLQAKEKNYIDNSVFSFG CCCCHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEECC FHGKIDIPPPRVII CCCEECCCCCCEEC >Mature Secondary Structure MLSQIKNSILCKCLQALLIGYFLMSSINVSGTFGRIINNNTETHSVKGMTCNFLKKIFKC CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEECCCCHHHHHHHHHC DGIPEELDDYETKDTKTTKLAKGIPLLEYLVPAHTTLAGYSFQLQAKEKNYIDNSVFSFG CCCCHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEECC FHGKIDIPPPRVII CCCEECCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA