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The map label for this gene is 146301698

Identifier: 146301698

GI number: 146301698

Start: 4730203

End: 4731558

Strand: Reverse

Name: 146301698

Synonym: Fjoh_3960

Alternate gene names: NA

Gene position: 4731558-4730203 (Counterclockwise)

Preceding gene: 146301699

Following gene: 146301697

Centisome position: 77.61

GC content: 37.32

Gene sequence:

>1356_bases
ATGCTCAATATATCTAAAGATAATAATATACTTATAACTCCAGGCAAATACAAGTCGATTACAAGTGTTGCCAAGAGACC
GCATTATCAAATTTTAAACAGGGTAATTATTGGATTTCTGATATTTTCAGTTGCCTGTCTGTTCCTGCCGTGGACTCAGA
ATATTTCGGGAAGCGGTTCAGTTACTACTTTAAAACCAGACCAAAGACCGCAGACAGTACATAATGCAATTGCCGGACGT
ATCGAAAAATGGTATGTTCAGGAAGGTGATTATGTAAAGAAAGGCGATACAATCGTTTTTATTTCTGAGGTAAAAGAAGA
TTACTTAGATCCTAATTTGGTTAACAATACCAAACAGCAGGTCGATGCCAAAAAAATGGCTGTTGAATCTTATGGAGACA
AAGTAAACTCTCTTGATGTACAGGCTCAGTCGCTTAATACAGAAAGAGAGCTGAAACTGCAGCAGGCTCAAAATAAAATT
AAACAAGCCCAGCTGAAAATTAAAAGTGACAGCATGGATCTTGAAGCGGTAAAAACGCAGTTAAGAATTGCTAAAACGCA
GTTTGACCGTTCTACAGCGCTTAATAAAGAAGGTTTAAAGCCGCTTACAGATGTGGAGCAGAAAAGATTAAAACTTCAGG
AATCTGAAGCTTATATCATTACACAGCAAAATAAACTATTAAGCAGTAAAAACGAATTGATTAATGCCAGAGTTGAAATT
AATCGTATCACGGCTGAATATTCTGAAAAGATTTCGAAATCAAGAAGTGATAAATTTACCGCTTTAAGTACACAATACGA
TACAGAAGCCCAGGTAAATAAACTGGAAAACCAGTATACAAATTATAGATTAAGAAACGGTTTGTACTATATTACAGCGC
CGCAAAGCGGTTATGTAAACCGTGCTTTACTGGCTGGTCTTGGAGAAACTATTAAAGAAGGAACTCCAATTGTGAGTATT
ATGCCGTCTAGTTATGATATTGCCGTTGAAACTTATGTTGATCCTATCGATCTTCCGCTGGTTCACCGCGGTGCAAAAGT
GAGAGTTTGGTTTGACGGATGGCCGAGAATTGTTTTCTCTGGATGGCCGGGATTATCATACGGAACGTATGGCGGTAAAA
TTGTGGCAATTGAAAACTTTATCAGTGCCAATGGAAAATACAGAGTCCTGATTTCACCAGATGGTGTAGATAATAAATGG
CCAAAAGAACTAAGTATTGGAGCAGGAGCGCAAAGTATTGCTCTGCTTGAAACAGTTTCTGTTTGGTATGAAATATGGCG
TAACCTAAATGGTTTCCCTCCAAATTATTATAAAGCAGACGAAAAAGACGCAAAAAATGGAAAAGACAAAAAATAA

Upstream 100 bases:

>100_bases
CGGTAATTGTTACTTCTAAAAATGACATGTGGAAGAACAAATGCGGCCGTATGATAACGATTGACGATGGAAAAATTATT
AACGACATAAAGCTATAATC

Downstream 100 bases:

>100_bases
ATTGAAATACGTTGTACGACTGTTTTCTCTCTTATTTTTATTCGGTTTTTCGACTTCTTATGGTCAGGATTTTAATAAAG
AGGAACTTAGTTACAGCGAG

Product: secretion protein HlyD family protein

Products: NA

Alternate protein names: Type I Secretion Membrane Fusion Protein HlyD Family; Secretion Protein HlyD; Secretion Protein HlyD Family Protein; HlyD Family Type I Secretion Membrane Fusion Protein; HlyD Family Secretion Protein; Outer Membrane Efflux Protein; Multidrug Resistance Efflux Pump-Like Protein; Type I Secretion Membrane Fusion Protein HlyD; Membrane Fusion Protein; Efflux Transporter Membrane Fusion Protein; Signal Peptide; Xin Secretion Protein; ABC Transporter Membrane Fusion Efflux Protein; Type I Antifreeze ProteinHlyD Family Secretion Protein; Secretion Protein; RND Efflux Membrane Fusion Proteins; Biotin/Lipoyl Attachment Domain-Containing Protein; Multidrug Resistance Efflux Pump

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MLNISKDNNILITPGKYKSITSVAKRPHYQILNRVIIGFLIFSVACLFLPWTQNISGSGSVTTLKPDQRPQTVHNAIAGR
IEKWYVQEGDYVKKGDTIVFISEVKEDYLDPNLVNNTKQQVDAKKMAVESYGDKVNSLDVQAQSLNTERELKLQQAQNKI
KQAQLKIKSDSMDLEAVKTQLRIAKTQFDRSTALNKEGLKPLTDVEQKRLKLQESEAYIITQQNKLLSSKNELINARVEI
NRITAEYSEKISKSRSDKFTALSTQYDTEAQVNKLENQYTNYRLRNGLYYITAPQSGYVNRALLAGLGETIKEGTPIVSI
MPSSYDIAVETYVDPIDLPLVHRGAKVRVWFDGWPRIVFSGWPGLSYGTYGGKIVAIENFISANGKYRVLISPDGVDNKW
PKELSIGAGAQSIALLETVSVWYEIWRNLNGFPPNYYKADEKDAKNGKDKK

Sequences:

>Translated_451_residues
MLNISKDNNILITPGKYKSITSVAKRPHYQILNRVIIGFLIFSVACLFLPWTQNISGSGSVTTLKPDQRPQTVHNAIAGR
IEKWYVQEGDYVKKGDTIVFISEVKEDYLDPNLVNNTKQQVDAKKMAVESYGDKVNSLDVQAQSLNTERELKLQQAQNKI
KQAQLKIKSDSMDLEAVKTQLRIAKTQFDRSTALNKEGLKPLTDVEQKRLKLQESEAYIITQQNKLLSSKNELINARVEI
NRITAEYSEKISKSRSDKFTALSTQYDTEAQVNKLENQYTNYRLRNGLYYITAPQSGYVNRALLAGLGETIKEGTPIVSI
MPSSYDIAVETYVDPIDLPLVHRGAKVRVWFDGWPRIVFSGWPGLSYGTYGGKIVAIENFISANGKYRVLISPDGVDNKW
PKELSIGAGAQSIALLETVSVWYEIWRNLNGFPPNYYKADEKDAKNGKDKK
>Mature_451_residues
MLNISKDNNILITPGKYKSITSVAKRPHYQILNRVIIGFLIFSVACLFLPWTQNISGSGSVTTLKPDQRPQTVHNAIAGR
IEKWYVQEGDYVKKGDTIVFISEVKEDYLDPNLVNNTKQQVDAKKMAVESYGDKVNSLDVQAQSLNTERELKLQQAQNKI
KQAQLKIKSDSMDLEAVKTQLRIAKTQFDRSTALNKEGLKPLTDVEQKRLKLQESEAYIITQQNKLLSSKNELINARVEI
NRITAEYSEKISKSRSDKFTALSTQYDTEAQVNKLENQYTNYRLRNGLYYITAPQSGYVNRALLAGLGETIKEGTPIVSI
MPSSYDIAVETYVDPIDLPLVHRGAKVRVWFDGWPRIVFSGWPGLSYGTYGGKIVAIENFISANGKYRVLISPDGVDNKW
PKELSIGAGAQSIALLETVSVWYEIWRNLNGFPPNYYKADEKDAKNGKDKK

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50903; Mature: 50903

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNISKDNNILITPGKYKSITSVAKRPHYQILNRVIIGFLIFSVACLFLPWTQNISGSGS
CCEECCCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
VTTLKPDQRPQTVHNAIAGRIEKWYVQEGDYVKKGDTIVFISEVKEDYLDPNLVNNTKQQ
EEEECCCCCHHHHHHHHHHHHHEEEECCCCEEECCCEEEEEEHHHHHHCCCCCCCCHHHH
VDAKKMAVESYGDKVNSLDVQAQSLNTERELKLQQAQNKIKQAQLKIKSDSMDLEAVKTQ
HHHHHHHHHHHCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHH
LRIAKTQFDRSTALNKEGLKPLTDVEQKRLKLQESEAYIITQQNKLLSSKNELINARVEI
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHCHHHHEEEEEEE
NRITAEYSEKISKSRSDKFTALSTQYDTEAQVNKLENQYTNYRLRNGLYYITAPQSGYVN
EHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCEEECCCEEEEECCCCCCHH
RALLAGLGETIKEGTPIVSIMPSSYDIAVETYVDPIDLPLVHRGAKVRVWFDGWPRIVFS
HHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCCEEECCCEEEEEECCCCEEEEE
GWPGLSYGTYGGKIVAIENFISANGKYRVLISPDGVDNKWPKELSIGAGAQSIALLETVS
CCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHH
VWYEIWRNLNGFPPNYYKADEKDAKNGKDKK
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLNISKDNNILITPGKYKSITSVAKRPHYQILNRVIIGFLIFSVACLFLPWTQNISGSGS
CCEECCCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
VTTLKPDQRPQTVHNAIAGRIEKWYVQEGDYVKKGDTIVFISEVKEDYLDPNLVNNTKQQ
EEEECCCCCHHHHHHHHHHHHHEEEECCCCEEECCCEEEEEEHHHHHHCCCCCCCCHHHH
VDAKKMAVESYGDKVNSLDVQAQSLNTERELKLQQAQNKIKQAQLKIKSDSMDLEAVKTQ
HHHHHHHHHHHCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHH
LRIAKTQFDRSTALNKEGLKPLTDVEQKRLKLQESEAYIITQQNKLLSSKNELINARVEI
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHCHHHHEEEEEEE
NRITAEYSEKISKSRSDKFTALSTQYDTEAQVNKLENQYTNYRLRNGLYYITAPQSGYVN
EHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCEEECCCEEEEECCCCCCHH
RALLAGLGETIKEGTPIVSIMPSSYDIAVETYVDPIDLPLVHRGAKVRVWFDGWPRIVFS
HHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCCEEECCCEEEEEECCCCEEEEE
GWPGLSYGTYGGKIVAIENFISANGKYRVLISPDGVDNKWPKELSIGAGAQSIALLETVS
CCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHH
VWYEIWRNLNGFPPNYYKADEKDAKNGKDKK
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA