Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301681

Identifier: 146301681

GI number: 146301681

Start: 4700302

End: 4702281

Strand: Reverse

Name: 146301681

Synonym: Fjoh_3943

Alternate gene names: NA

Gene position: 4702281-4700302 (Counterclockwise)

Preceding gene: 146301682

Following gene: 146301680

Centisome position: 77.13

GC content: 34.8

Gene sequence:

>1980_bases
ATGCTAAAAAAAATAATAAATATCAAGTTACTGGTATTGGTTTTTTGTGCCTTTACCTTACAAGTTACAAGTCAGGAAAC
AAAGCTGAGATTAACCGGAATGGCAGATGTGCCCATTCCGGGTGCAGTTTTAAAGATGACCTATGATGCTAAAGGCGGAC
CGCTGGAAAACATTAAAGATATCAATGGTTATGCCTACGTTTTTAATGATTACCGATGGGAAATTGAAGACCTGAAAATG
AAGAAAAACGGCGCTGTTTGGAATGTCGAATTTACGGTTCCAAAAAACTGTGCTTTCATGGCTTTCAAATTTTATGGCAA
TACCGATAATGGTCTGGTAACTGATACCGGACAAGACACCGGATATCTTTTAGTAGCCTTTAAAGAACCAAAAGTAAAAA
TGCCTGGTGCAGATTTAGCCTGGGCAACTTTTAGAAACAAAGATTTCAACGGTCAGTTTGGCGGTTATTTCAAAGAGTTC
ACTATCAATGGAGATGCTACAGAATATTGGTTAAAGAAAGAAGTAGCCGATAATGGAAACAGATTTCCTGAATTTTTTGA
TACCTATTTTAAAGTTTTGAAAGTACAAAAGCCTGAAAAATTTCAGGAATTAGGAAGCCGTTTTCTGGGAGATTTCACCA
AAAATATGAAAGGAATGCCAGAAGAAGTATATCTGAAAGTGCATAACATTTACGCTTATGAATTAAAAGATAAAGCAAAA
GCTGATTCTATAGAAAACGTAATTGTAAAACAATTTCCAAAAGGTGCTTTTTTAAGATTCAAAGCCTATCAAAAAATTAT
GCCTATTGCAGATGCTGCCGAGAGAAACAAAGTGATCACTCAGTTTTTAGCTGATTTTCCATACACAACAGATGTACCGG
ATTCGCAAAAATATTTCTATGACAACATCGTAAAAATGCAGTTTGGATATTACTTTGAAAATAAAGATTATAAAAGCGTT
TTAGCCTTAATTCCAACCATGAATTTTGCTAATTTAAATGATGCTTACCATCAAAATATTTCAAAAGCATTATATCTAAA
AGTAGTAGATCCTGCAGTTATCGAAACAATGGCAGTGCCGATGATTAAGCTGATGCAGGAAAAAGTAAACGATATGTCAT
ACATGCAGGGCATTTACTGGTCACCAAATCAGGCTACAGAAAATGCAAAAACACAATTGAATAATGAATTGGTGATTCAG
ATTCGTATGTACGATATGTTGAAAAAATACAAAGAAGTTTTAGAAACTTTTGAATTACTGCCATTTCAAAAACGTTACGA
AAAAGCCAGCATAAACGACATTCATGTTAGAGCTTTAGAGGCTTTAAACAAACCAATAACCGAAGTGCTGAAAAATGCTG
CAAAAGCCAATACTTTATCAGAAGGATTAACAGCAAAACTAAAAGAAGCCTTTATAAAAGAAGGAAAAAAAGAAGCTGAT
TTTCCGGCTTATTTAGAGCAGTTGAAAAAAGAAAACAATTCTGAAGAAAAAATCACTTTAATGAATCCGGTTCCGGCTCC
GGCAATCAAAGTTCAGAGCGCAGACGGAAAAACAAAAGAGTTAGTGTTAAACAGCGGCAAAATCATTGTAATCGATTTTT
GGGCAACCTGGTGCGGACCTTGTAAAAAAGCATTTCCGGCTATGCAGCAATTGGTCAACAATTTTAAAGAAGACAAACAA
GTTGAGATTTATTTCATAAGCACTCAGGAAACAAAAGAAGGCTATAAAAAAGAAGCTGCGGCTTATTTAAAAGAAAAAGG
TCTAAAGCTTGACACTTATTTTGATTTAGTAAAAAAAGGCGGCGGCACAAACAATGCTTCATTTTCAAACTATGCGGCAA
TTTTTAAATCAAGCGGCATTCCTCGAAAAGTAGTAATCAAGAATGGCCAGATTCGTTTTACATCAGAAGGATATTCAGGT
AATCCAGGACAGCTTGTAGACGAACTTACAAACGTTATTAATGCTTTAAAAAACGAATAG

Upstream 100 bases:

>100_bases
AAACCTATACACTGGCACCAAACAGCGCTGGATATGTATTCCCAATCAATCAAAATTATATCGATTTAAACCCTGAATTA
GGGAAATAAAAAACACAGCA

Downstream 100 bases:

>100_bases
TTTTTTGAAAATCAGAAATATATGAAAAAAGTATTTTTACTGTGTACACTCGCTTTGAGTGTACATAGTTTATCGGCACA
GAAAAAAGCGGTTGACGAAT

Product: redoxin domain-containing protein

Products: NA

Alternate protein names: AhpC/TSA Family Protein; Thioredoxin-Like Protein

Number of amino acids: Translated: 659; Mature: 659

Protein sequence:

>659_residues
MLKKIINIKLLVLVFCAFTLQVTSQETKLRLTGMADVPIPGAVLKMTYDAKGGPLENIKDINGYAYVFNDYRWEIEDLKM
KKNGAVWNVEFTVPKNCAFMAFKFYGNTDNGLVTDTGQDTGYLLVAFKEPKVKMPGADLAWATFRNKDFNGQFGGYFKEF
TINGDATEYWLKKEVADNGNRFPEFFDTYFKVLKVQKPEKFQELGSRFLGDFTKNMKGMPEEVYLKVHNIYAYELKDKAK
ADSIENVIVKQFPKGAFLRFKAYQKIMPIADAAERNKVITQFLADFPYTTDVPDSQKYFYDNIVKMQFGYYFENKDYKSV
LALIPTMNFANLNDAYHQNISKALYLKVVDPAVIETMAVPMIKLMQEKVNDMSYMQGIYWSPNQATENAKTQLNNELVIQ
IRMYDMLKKYKEVLETFELLPFQKRYEKASINDIHVRALEALNKPITEVLKNAAKANTLSEGLTAKLKEAFIKEGKKEAD
FPAYLEQLKKENNSEEKITLMNPVPAPAIKVQSADGKTKELVLNSGKIIVIDFWATWCGPCKKAFPAMQQLVNNFKEDKQ
VEIYFISTQETKEGYKKEAAAYLKEKGLKLDTYFDLVKKGGGTNNASFSNYAAIFKSSGIPRKVVIKNGQIRFTSEGYSG
NPGQLVDELTNVINALKNE

Sequences:

>Translated_659_residues
MLKKIINIKLLVLVFCAFTLQVTSQETKLRLTGMADVPIPGAVLKMTYDAKGGPLENIKDINGYAYVFNDYRWEIEDLKM
KKNGAVWNVEFTVPKNCAFMAFKFYGNTDNGLVTDTGQDTGYLLVAFKEPKVKMPGADLAWATFRNKDFNGQFGGYFKEF
TINGDATEYWLKKEVADNGNRFPEFFDTYFKVLKVQKPEKFQELGSRFLGDFTKNMKGMPEEVYLKVHNIYAYELKDKAK
ADSIENVIVKQFPKGAFLRFKAYQKIMPIADAAERNKVITQFLADFPYTTDVPDSQKYFYDNIVKMQFGYYFENKDYKSV
LALIPTMNFANLNDAYHQNISKALYLKVVDPAVIETMAVPMIKLMQEKVNDMSYMQGIYWSPNQATENAKTQLNNELVIQ
IRMYDMLKKYKEVLETFELLPFQKRYEKASINDIHVRALEALNKPITEVLKNAAKANTLSEGLTAKLKEAFIKEGKKEAD
FPAYLEQLKKENNSEEKITLMNPVPAPAIKVQSADGKTKELVLNSGKIIVIDFWATWCGPCKKAFPAMQQLVNNFKEDKQ
VEIYFISTQETKEGYKKEAAAYLKEKGLKLDTYFDLVKKGGGTNNASFSNYAAIFKSSGIPRKVVIKNGQIRFTSEGYSG
NPGQLVDELTNVINALKNE
>Mature_659_residues
MLKKIINIKLLVLVFCAFTLQVTSQETKLRLTGMADVPIPGAVLKMTYDAKGGPLENIKDINGYAYVFNDYRWEIEDLKM
KKNGAVWNVEFTVPKNCAFMAFKFYGNTDNGLVTDTGQDTGYLLVAFKEPKVKMPGADLAWATFRNKDFNGQFGGYFKEF
TINGDATEYWLKKEVADNGNRFPEFFDTYFKVLKVQKPEKFQELGSRFLGDFTKNMKGMPEEVYLKVHNIYAYELKDKAK
ADSIENVIVKQFPKGAFLRFKAYQKIMPIADAAERNKVITQFLADFPYTTDVPDSQKYFYDNIVKMQFGYYFENKDYKSV
LALIPTMNFANLNDAYHQNISKALYLKVVDPAVIETMAVPMIKLMQEKVNDMSYMQGIYWSPNQATENAKTQLNNELVIQ
IRMYDMLKKYKEVLETFELLPFQKRYEKASINDIHVRALEALNKPITEVLKNAAKANTLSEGLTAKLKEAFIKEGKKEAD
FPAYLEQLKKENNSEEKITLMNPVPAPAIKVQSADGKTKELVLNSGKIIVIDFWATWCGPCKKAFPAMQQLVNNFKEDKQ
VEIYFISTQETKEGYKKEAAAYLKEKGLKLDTYFDLVKKGGGTNNASFSNYAAIFKSSGIPRKVVIKNGQIRFTSEGYSG
NPGQLVDELTNVINALKNE

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75147; Mature: 75147

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKIINIKLLVLVFCAFTLQVTSQETKLRLTGMADVPIPGAVLKMTYDAKGGPLENIKD
CCCHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCHHH
INGYAYVFNDYRWEIEDLKMKKNGAVWNVEFTVPKNCAFMAFKFYGNTDNGLVTDTGQDT
CCCEEEEEECCEEEHHHEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCEEEECCCCC
GYLLVAFKEPKVKMPGADLAWATFRNKDFNGQFGGYFKEFTINGDATEYWLKKEVADNGN
CEEEEEEECCCEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCC
RFPEFFDTYFKVLKVQKPEKFQELGSRFLGDFTKNMKGMPEEVYLKVHNIYAYELKDKAK
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEEEEEECCHHH
ADSIENVIVKQFPKGAFLRFKAYQKIMPIADAAERNKVITQFLADFPYTTDVPDSQKYFY
HHHHHHHHHHHCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
DNIVKMQFGYYFENKDYKSVLALIPTMNFANLNDAYHQNISKALYLKVVDPAVIETMAVP
HHHEEEEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEECCHHHHHHHHHH
MIKLMQEKVNDMSYMQGIYWSPNQATENAKTQLNNELVIQIRMYDMLKKYKEVLETFELL
HHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHC
PFQKRYEKASINDIHVRALEALNKPITEVLKNAAKANTLSEGLTAKLKEAFIKEGKKEAD
CCHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FPAYLEQLKKENNSEEKITLMNPVPAPAIKVQSADGKTKELVLNSGKIIVIDFWATWCGP
CHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCCCEEEEEECCCEEEEEEHHHHCCH
CKKAFPAMQQLVNNFKEDKQVEIYFISTQETKEGYKKEAAAYLKEKGLKLDTYFDLVKKG
HHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCEEHHHHHHHHCC
GGTNNASFSNYAAIFKSSGIPRKVVIKNGQIRFTSEGYSGNPGQLVDELTNVINALKNE
CCCCCCCCHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKKIINIKLLVLVFCAFTLQVTSQETKLRLTGMADVPIPGAVLKMTYDAKGGPLENIKD
CCCHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCHHH
INGYAYVFNDYRWEIEDLKMKKNGAVWNVEFTVPKNCAFMAFKFYGNTDNGLVTDTGQDT
CCCEEEEEECCEEEHHHEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCEEEECCCCC
GYLLVAFKEPKVKMPGADLAWATFRNKDFNGQFGGYFKEFTINGDATEYWLKKEVADNGN
CEEEEEEECCCEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCC
RFPEFFDTYFKVLKVQKPEKFQELGSRFLGDFTKNMKGMPEEVYLKVHNIYAYELKDKAK
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEEEEEECCHHH
ADSIENVIVKQFPKGAFLRFKAYQKIMPIADAAERNKVITQFLADFPYTTDVPDSQKYFY
HHHHHHHHHHHCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
DNIVKMQFGYYFENKDYKSVLALIPTMNFANLNDAYHQNISKALYLKVVDPAVIETMAVP
HHHEEEEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEECCHHHHHHHHHH
MIKLMQEKVNDMSYMQGIYWSPNQATENAKTQLNNELVIQIRMYDMLKKYKEVLETFELL
HHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHC
PFQKRYEKASINDIHVRALEALNKPITEVLKNAAKANTLSEGLTAKLKEAFIKEGKKEAD
CCHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FPAYLEQLKKENNSEEKITLMNPVPAPAIKVQSADGKTKELVLNSGKIIVIDFWATWCGP
CHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCCCEEEEEECCCEEEEEEHHHHCCH
CKKAFPAMQQLVNNFKEDKQVEIYFISTQETKEGYKKEAAAYLKEKGLKLDTYFDLVKKG
HHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCEEHHHHHHHHCC
GGTNNASFSNYAAIFKSSGIPRKVVIKNGQIRFTSEGYSGNPGQLVDELTNVINALKNE
CCCCCCCCHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA