| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301660
Identifier: 146301660
GI number: 146301660
Start: 4671585
End: 4672406
Strand: Reverse
Name: 146301660
Synonym: Fjoh_3922
Alternate gene names: NA
Gene position: 4672406-4671585 (Counterclockwise)
Preceding gene: 146301661
Following gene: 146301659
Centisome position: 76.64
GC content: 28.59
Gene sequence:
>822_bases ATGACTGATTTATGGGAATTTTATAAGAGAGGAACATGGGTAGAGCCTTTTTTAACTTTGTCAATCTGCTTGTTTGTATT GACATCGTTATTCCTGTACCTTTTAATTATTAAAAGCCGAAATAAAAATATAATAAAAGCAAGACGTAAAATTGAATATG ATGCCTTTATAGATAAACTGCTTTTTTCTGTAGTTTTTGAAGATATTTCTTTCTCAGATGTTTTAAAGAATAATGAGTAT GTATTAATGTCTCAAAAAAAGTTTTTTAGAGAAGTTATTACAGAATCGGTTATAAATCTTCATAAAAATTATGATGGTAT TTATGCAAAAAAATTAGAACAGTTTTACAAAGATTCTGAGCTTAAAAACGACTCATTTAAAAAACTGAAAAGTTTAAAAT GGGATGTAAAGTGCAAAGGAATTACAGAACTTGCAGAAATGAATGTTTATCATGCTTTTGATCTTATTATAACCTTTTCC CGTGCGCGAAATAAAATTTTACAAATTACGGCAATAAATGCCTGTATTAAGCTGGCAGGAACAAAAGGAATTGTTCATCT TTCTGAACATACAAATCCTATTGACGACTGGACTCAGGTTAATATTATTCATGCCTTTAAAAAACATGATATAGGCGATA CAAAAGGTATTGAACTTTTACTGGAATCACAAAATACTACAGTTGTTACACTTGGTTTAAAGCTTATAAAAGAGCTTAAA TTGACTCAAAAACTTTCTTATGTTGAGCAATTAACAGAAAGGACTTCAAATACATTAATAAAGTATGAAGCTCAAAATGT TCTGCATACACTAACAGTTTAA
Upstream 100 bases:
>100_bases TTTGTACGTCCAATTTTTCTGTATGAATACGAAGAATATCTGCCAGGTGAATACAGAAACAGGTTTAATGCTCAGATAAT TATCACGAAACGATTTTAAG
Downstream 100 bases:
>100_bases CAAGCATTGCTGATGACTTTTTTTAATCACGAAATAACAATCTTTACCCACATATATTTAATTCTCATATTGGCTTATGC GATATTGATTATGTCGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MTDLWEFYKRGTWVEPFLTLSICLFVLTSLFLYLLIIKSRNKNIIKARRKIEYDAFIDKLLFSVVFEDISFSDVLKNNEY VLMSQKKFFREVITESVINLHKNYDGIYAKKLEQFYKDSELKNDSFKKLKSLKWDVKCKGITELAEMNVYHAFDLIITFS RARNKILQITAINACIKLAGTKGIVHLSEHTNPIDDWTQVNIIHAFKKHDIGDTKGIELLLESQNTTVVTLGLKLIKELK LTQKLSYVEQLTERTSNTLIKYEAQNVLHTLTV
Sequences:
>Translated_273_residues MTDLWEFYKRGTWVEPFLTLSICLFVLTSLFLYLLIIKSRNKNIIKARRKIEYDAFIDKLLFSVVFEDISFSDVLKNNEY VLMSQKKFFREVITESVINLHKNYDGIYAKKLEQFYKDSELKNDSFKKLKSLKWDVKCKGITELAEMNVYHAFDLIITFS RARNKILQITAINACIKLAGTKGIVHLSEHTNPIDDWTQVNIIHAFKKHDIGDTKGIELLLESQNTTVVTLGLKLIKELK LTQKLSYVEQLTERTSNTLIKYEAQNVLHTLTV >Mature_272_residues TDLWEFYKRGTWVEPFLTLSICLFVLTSLFLYLLIIKSRNKNIIKARRKIEYDAFIDKLLFSVVFEDISFSDVLKNNEYV LMSQKKFFREVITESVINLHKNYDGIYAKKLEQFYKDSELKNDSFKKLKSLKWDVKCKGITELAEMNVYHAFDLIITFSR ARNKILQITAINACIKLAGTKGIVHLSEHTNPIDDWTQVNIIHAFKKHDIGDTKGIELLLESQNTTVVTLGLKLIKELKL TQKLSYVEQLTERTSNTLIKYEAQNVLHTLTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31811; Mature: 31679
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLWEFYKRGTWVEPFLTLSICLFVLTSLFLYLLIIKSRNKNIIKARRKIEYDAFIDKL CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LFSVVFEDISFSDVLKNNEYVLMSQKKFFREVITESVINLHKNYDGIYAKKLEQFYKDSE HHHHHHHCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC LKNDSFKKLKSLKWDVKCKGITELAEMNVYHAFDLIITFSRARNKILQITAINACIKLAG CCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHCC TKGIVHLSEHTNPIDDWTQVNIIHAFKKHDIGDTKGIELLLESQNTTVVTLGLKLIKELK CCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHH LTQKLSYVEQLTERTSNTLIKYEAQNVLHTLTV HHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCC >Mature Secondary Structure TDLWEFYKRGTWVEPFLTLSICLFVLTSLFLYLLIIKSRNKNIIKARRKIEYDAFIDKL CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LFSVVFEDISFSDVLKNNEYVLMSQKKFFREVITESVINLHKNYDGIYAKKLEQFYKDSE HHHHHHHCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC LKNDSFKKLKSLKWDVKCKGITELAEMNVYHAFDLIITFSRARNKILQITAINACIKLAG CCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHCC TKGIVHLSEHTNPIDDWTQVNIIHAFKKHDIGDTKGIELLLESQNTTVVTLGLKLIKELK CCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHH LTQKLSYVEQLTERTSNTLIKYEAQNVLHTLTV HHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA