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The map label for this gene is ybjT [H]

Identifier: 146301482

GI number: 146301482

Start: 4438557

End: 4439969

Strand: Reverse

Name: ybjT [H]

Synonym: Fjoh_3741

Alternate gene names: 146301482

Gene position: 4439969-4438557 (Counterclockwise)

Preceding gene: 146301483

Following gene: 146301481

Centisome position: 72.82

GC content: 41.76

Gene sequence:

>1413_bases
ATGAAAATTTTATTAACAGGTGCTACAGGTTATATCGGCAAGAGGCTGCTGCCCTTGCTCCTGGATCACCGAAATGAGGT
GGTCTGCTGCGTCCGGGATAAAAACAGGTTTTATTTTCCTGAACAGTTTAAAAATAAAATACAGGTCATTGAAGCTGATT
TTCTGGATCCGGAAAGTCTTAAAAATATCCCTGATGATATAGATGCAGCTTTTTACCTGATCCATTCCATGTCCGGCGCT
TCCAATTATGATGAATTGGAAAGCATTTCGGCACATTATTTCACTCAAAAAATAAACCAGACAAATGCAAAACAAATTAT
TTACCTGAGCGGAATTGTAAATGATAAATCACTATCCAAACATTTATCATCAAGAAAGGCGGTGGAAGATATTTTAAAGA
CCGCAGCAGTGCCATTAACTGTACTTCGGGCGGGAATAATAGTAGGATCAGGAAGTGCCTCTTTTGAAATAATACGCGAT
CTGGTGGATAAACTGCCCATTATGGTTACCCCTAAATGGCTCAATACAAAATGCCAGCCGATTGCTATTAGCGATGTTTT
GGAATTTTTAATCCGCTCGCTGTTAAACCCGGTAGTTTATAATGAAAGTTTTGATATCGGGGGACCTGATATTTTGACCT
ACAAGGAAATGCTGCTGGAGTTTGCCAGAGTAAAAAAACTCCAAAGATACATTTACACCGTACCGGTGATGACCCCGAAA
TTATCGTCTTACTGGCTGTATTTTGTGACGTCAACTTCTTTTAAGCTGGCCTCGGCGCTGGTTAGCAGCATGAAAGTAGA
AGTCATCTGCGGAGATAACAGAATTAATAATTTACTGGGAGTTACACCTATTGCTTACCGTCAGGCACTAGAGAGGGCTT
TGAAAAAGATCAGTGATGATGATATCATCTCGAGCTGGAAAGACTCCCGTGTCAGCGGACAGTTTAAGGGAAATGTTTCC
CAATACCTGAAGGTTCCAAAAAAGGGATGTTATATTGACAGGAGAAAAAGAGCAATCATAAACAGGGAATATACCATTGC
ACGAGTTTGGTCCATAGGCGGGGAGACAGGGTGGTATTATGCCGACTGGCTTTGGGATCTGCGCGGGTTCATCGATAAGA
TTTTTGGCGGTGTAGGCACAAGGAGGGGAAGGACACATAAAAAGGAAATACATGCAGGAGATGCACTGGATTTCTGGAGG
GTGGTATACGCCGATAAGAAGCAGGGCAAACTGGTTTTATATGCCGAAATGAAACTTCCCGGCGAAGCGTGGCTGGAATT
TAAAATAATCAACAATACCTTGTATCAGGCGGCCACTTTTAAACCGCGCGGTATTATGGGCAGAATCTACTGGTATGCTG
TCTTGCCATTCCATGGTTTTATATTTAACGGCATGCTTAAAAAACTCATTTAA

Upstream 100 bases:

>100_bases
GGCAGGGTATCTTATTTCTGAAGATGCAGCATCAATTTCAGGCCAGATTTTCGCGATGGATTATGGTTTGGTAAGCTTTA
AATTGTAAAACAGCTCAGAG

Downstream 100 bases:

>100_bases
GGATACAGCGGACAACATGGGCTGGCTCGCAACTATTTTACAGCTGGGGGTTATGGTATTGGGATACCTTATTTTACTAT
ACTGCAGAGTTTAAAAGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MKILLTGATGYIGKRLLPLLLDHRNEVVCCVRDKNRFYFPEQFKNKIQVIEADFLDPESLKNIPDDIDAAFYLIHSMSGA
SNYDELESISAHYFTQKINQTNAKQIIYLSGIVNDKSLSKHLSSRKAVEDILKTAAVPLTVLRAGIIVGSGSASFEIIRD
LVDKLPIMVTPKWLNTKCQPIAISDVLEFLIRSLLNPVVYNESFDIGGPDILTYKEMLLEFARVKKLQRYIYTVPVMTPK
LSSYWLYFVTSTSFKLASALVSSMKVEVICGDNRINNLLGVTPIAYRQALERALKKISDDDIISSWKDSRVSGQFKGNVS
QYLKVPKKGCYIDRRKRAIINREYTIARVWSIGGETGWYYADWLWDLRGFIDKIFGGVGTRRGRTHKKEIHAGDALDFWR
VVYADKKQGKLVLYAEMKLPGEAWLEFKIINNTLYQAATFKPRGIMGRIYWYAVLPFHGFIFNGMLKKLI

Sequences:

>Translated_470_residues
MKILLTGATGYIGKRLLPLLLDHRNEVVCCVRDKNRFYFPEQFKNKIQVIEADFLDPESLKNIPDDIDAAFYLIHSMSGA
SNYDELESISAHYFTQKINQTNAKQIIYLSGIVNDKSLSKHLSSRKAVEDILKTAAVPLTVLRAGIIVGSGSASFEIIRD
LVDKLPIMVTPKWLNTKCQPIAISDVLEFLIRSLLNPVVYNESFDIGGPDILTYKEMLLEFARVKKLQRYIYTVPVMTPK
LSSYWLYFVTSTSFKLASALVSSMKVEVICGDNRINNLLGVTPIAYRQALERALKKISDDDIISSWKDSRVSGQFKGNVS
QYLKVPKKGCYIDRRKRAIINREYTIARVWSIGGETGWYYADWLWDLRGFIDKIFGGVGTRRGRTHKKEIHAGDALDFWR
VVYADKKQGKLVLYAEMKLPGEAWLEFKIINNTLYQAATFKPRGIMGRIYWYAVLPFHGFIFNGMLKKLI
>Mature_470_residues
MKILLTGATGYIGKRLLPLLLDHRNEVVCCVRDKNRFYFPEQFKNKIQVIEADFLDPESLKNIPDDIDAAFYLIHSMSGA
SNYDELESISAHYFTQKINQTNAKQIIYLSGIVNDKSLSKHLSSRKAVEDILKTAAVPLTVLRAGIIVGSGSASFEIIRD
LVDKLPIMVTPKWLNTKCQPIAISDVLEFLIRSLLNPVVYNESFDIGGPDILTYKEMLLEFARVKKLQRYIYTVPVMTPK
LSSYWLYFVTSTSFKLASALVSSMKVEVICGDNRINNLLGVTPIAYRQALERALKKISDDDIISSWKDSRVSGQFKGNVS
QYLKVPKKGCYIDRRKRAIINREYTIARVWSIGGETGWYYADWLWDLRGFIDKIFGGVGTRRGRTHKKEIHAGDALDFWR
VVYADKKQGKLVLYAEMKLPGEAWLEFKIINNTLYQAATFKPRGIMGRIYWYAVLPFHGFIFNGMLKKLI

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=478, Percent_Identity=29.7071129707113, Blast_Score=236, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 53664; Mature: 53664

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILLTGATGYIGKRLLPLLLDHRNEVVCCVRDKNRFYFPEQFKNKIQVIEADFLDPESL
CEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHCCCEEEEEECCCCHHHH
KNIPDDIDAAFYLIHSMSGASNYDELESISAHYFTQKINQTNAKQIIYLSGIVNDKSLSK
HCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHH
HLSSRKAVEDILKTAAVPLTVLRAGIIVGSGSASFEIIRDLVDKLPIMVTPKWLNTKCQP
HHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHCCCEEEECHHHCCCCCC
IAISDVLEFLIRSLLNPVVYNESFDIGGPDILTYKEMLLEFARVKKLQRYIYTVPVMTPK
EEHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LSSYWLYFVTSTSFKLASALVSSMKVEVICGDNRINNLLGVTPIAYRQALERALKKISDD
CCCEEEEEEECCHHHHHHHHHHHCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHCCCC
DIISSWKDSRVSGQFKGNVSQYLKVPKKGCYIDRRKRAIINREYTIARVWSIGGETGWYY
HHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCH
ADWLWDLRGFIDKIFGGVGTRRGRTHKKEIHAGDALDFWRVVYADKKQGKLVLYAEMKLP
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEEECCC
GEAWLEFKIINNTLYQAATFKPRGIMGRIYWYAVLPFHGFIFNGMLKKLI
CCCEEEEEEECCHHHHHHCCCCCCCHHEEHEEEHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKILLTGATGYIGKRLLPLLLDHRNEVVCCVRDKNRFYFPEQFKNKIQVIEADFLDPESL
CEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHCCCEEEEEECCCCHHHH
KNIPDDIDAAFYLIHSMSGASNYDELESISAHYFTQKINQTNAKQIIYLSGIVNDKSLSK
HCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHH
HLSSRKAVEDILKTAAVPLTVLRAGIIVGSGSASFEIIRDLVDKLPIMVTPKWLNTKCQP
HHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHCCCEEEECHHHCCCCCC
IAISDVLEFLIRSLLNPVVYNESFDIGGPDILTYKEMLLEFARVKKLQRYIYTVPVMTPK
EEHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LSSYWLYFVTSTSFKLASALVSSMKVEVICGDNRINNLLGVTPIAYRQALERALKKISDD
CCCEEEEEEECCHHHHHHHHHHHCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHCCCC
DIISSWKDSRVSGQFKGNVSQYLKVPKKGCYIDRRKRAIINREYTIARVWSIGGETGWYY
HHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCH
ADWLWDLRGFIDKIFGGVGTRRGRTHKKEIHAGDALDFWRVVYADKKQGKLVLYAEMKLP
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEEECCC
GEAWLEFKIINNTLYQAATFKPRGIMGRIYWYAVLPFHGFIFNGMLKKLI
CCCEEEEEEECCHHHHHHCCCCCCCHHEEHEEEHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]