| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301473
Identifier: 146301473
GI number: 146301473
Start: 4427646
End: 4429307
Strand: Reverse
Name: 146301473
Synonym: Fjoh_3731
Alternate gene names: NA
Gene position: 4429307-4427646 (Counterclockwise)
Preceding gene: 146301476
Following gene: 146301472
Centisome position: 72.65
GC content: 37.55
Gene sequence:
>1662_bases ATGAAAAAAAATTACCTGTTATTTTTTATTTTATTGTCGTTTTTAACTTACTCACAAGATATTCTTTGGGAAAAGTCTTA TGGCGGCATTCATGCAGATTACCTTTTTGATGCACAACCTACAGCCGACTATGGGTTTATTCTGGCTGGCAGCTCCCTTT CTAACAAAACCGGAAATAAAGACGAAGATAATCATGGAGATCTTGATTATTGGATCTGGAAAATGAATGAAAAAGGAGAA CTCGACTGGCAGAAAAGTATTGGAGGAAATGGATTTGATCTTCTTCAAAGTATAAAAGGAACCAGAGACGGAGGTTTTAT TCTGGCAGGAACTTCAAGTTCAGGAAACAGTTTTCAGAAAAAAGACAATTGTAAAGGCCTTACTGATTTTTGGGTTATCA AACTAGACGCTTCCGGTGGAGAGCAATGGCAGAGAACTATTGGCGGTGATGGTCAGGATGAACTTTTATGTGCTTTCCAG ACCAAAGACGGCGGTTATATTTTAGGCGGCTCATCGAGTTCAAGTCCTTCTTCTGTTACAAATATTAAGGCAGAAGGAAA AATGGACGCTTTTCTTCAAACAGATTTATACAGCAAATCAGAAAAAAGCCGTGGTAATATGGATTACTGGATCGTAAAAC TCGATAAAGAAGGAGTTATTGAGTGGCAGAAAACTTACGGTGGTAAATATGCTGATGTATTACGAAGCATGGAACAAACA GCTGATAACGGATATATTTTGGCTGGATATTCAAACTCACCTGTTTCAGGAGATAAAGCTGACGCTAATAAGGGAGTGGG TGATTACTGGATCATTAAAATAGATGACTCAGGAGCTGTTCAATGGCAGTCAACGTATGGAGGAGATGGTGATGACCAGC CTTATGTAATTCATCAAACGGCAGATGGCGGCTATATTTTAGGAGGTAATTCTAACAGCACAAATCCTTTGACCACCCTT GGAGGAATCGTAAGTAATGGAACTGATTTTTGGATTTTGAGACTAGATCATGAAGGAGGAGTTGTATGGAGTAAAACTTA TGATTTTGGAAAAGTAGATATTTTAACTTCCCTTGTTGAGAATAATGATAACACATATTTAATTGGAGGTTACGCAAAAT CTGAAGCTAAGCAGTCTTTGCTTGGAGATGCCGCGAAAAAAGCCGGGACTGGAAAAGATAAGGAAGGAATTAATGATTAT ATCGCATTAAAGATAGATGAAAAAGGAGAAGAATTATGGAAGAAAACCGTTGGAAGTGCCGGAGAAGATATTCTGCGAAA ACTTATAGAAACCAGAGACGGCGGCTATTTAATGGCGGGAACATCAAATTCAGGTTCTTCAAAAGATAAAAGATCAACCA TAGGAGGAAATGATTTTTGGGTTGTGAAGCTGAAAGATAAGGCTAAAGTTGAAAAAGTAAAAGCAAGTATTGAGGCTATT CCAAATCCTGCTGTTACTTACACCAACGTAATTATAGGCTATGATTTTACAGAAGGAACAGCTTCGGTCATTGATATTTT AGGCAGGATTTTACAACAGTTCAGTATCAACAGCAGAACCGTTCCTGTTGACTTAAGTCATTATGCAGAGGGAATTTATA TCATTAAAATTAAGACTGATGTAAAAACAGAGTCAGTTAAAGTAATTAAAACCGTACGATAG
Upstream 100 bases:
>100_bases ACTCCAATTTGTGTTAAGGTTAAATCATTACGCTTTTTTAATTTCTACATAATAACCATTTATTTAATCTTAATTTATTA CTTCAGGCTAAACCAGAATT
Downstream 100 bases:
>100_bases AAAATGTTTAAAATAAACTACAATTTAAAAGGCTTAATTAGTATTTTTCTTTTTATGCTGATGTCCACGCTTACTTATGG GCAGACAGAAAATGATCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MKKNYLLFFILLSFLTYSQDILWEKSYGGIHADYLFDAQPTADYGFILAGSSLSNKTGNKDEDNHGDLDYWIWKMNEKGE LDWQKSIGGNGFDLLQSIKGTRDGGFILAGTSSSGNSFQKKDNCKGLTDFWVIKLDASGGEQWQRTIGGDGQDELLCAFQ TKDGGYILGGSSSSSPSSVTNIKAEGKMDAFLQTDLYSKSEKSRGNMDYWIVKLDKEGVIEWQKTYGGKYADVLRSMEQT ADNGYILAGYSNSPVSGDKADANKGVGDYWIIKIDDSGAVQWQSTYGGDGDDQPYVIHQTADGGYILGGNSNSTNPLTTL GGIVSNGTDFWILRLDHEGGVVWSKTYDFGKVDILTSLVENNDNTYLIGGYAKSEAKQSLLGDAAKKAGTGKDKEGINDY IALKIDEKGEELWKKTVGSAGEDILRKLIETRDGGYLMAGTSNSGSSKDKRSTIGGNDFWVVKLKDKAKVEKVKASIEAI PNPAVTYTNVIIGYDFTEGTASVIDILGRILQQFSINSRTVPVDLSHYAEGIYIIKIKTDVKTESVKVIKTVR
Sequences:
>Translated_553_residues MKKNYLLFFILLSFLTYSQDILWEKSYGGIHADYLFDAQPTADYGFILAGSSLSNKTGNKDEDNHGDLDYWIWKMNEKGE LDWQKSIGGNGFDLLQSIKGTRDGGFILAGTSSSGNSFQKKDNCKGLTDFWVIKLDASGGEQWQRTIGGDGQDELLCAFQ TKDGGYILGGSSSSSPSSVTNIKAEGKMDAFLQTDLYSKSEKSRGNMDYWIVKLDKEGVIEWQKTYGGKYADVLRSMEQT ADNGYILAGYSNSPVSGDKADANKGVGDYWIIKIDDSGAVQWQSTYGGDGDDQPYVIHQTADGGYILGGNSNSTNPLTTL GGIVSNGTDFWILRLDHEGGVVWSKTYDFGKVDILTSLVENNDNTYLIGGYAKSEAKQSLLGDAAKKAGTGKDKEGINDY IALKIDEKGEELWKKTVGSAGEDILRKLIETRDGGYLMAGTSNSGSSKDKRSTIGGNDFWVVKLKDKAKVEKVKASIEAI PNPAVTYTNVIIGYDFTEGTASVIDILGRILQQFSINSRTVPVDLSHYAEGIYIIKIKTDVKTESVKVIKTVR >Mature_553_residues MKKNYLLFFILLSFLTYSQDILWEKSYGGIHADYLFDAQPTADYGFILAGSSLSNKTGNKDEDNHGDLDYWIWKMNEKGE LDWQKSIGGNGFDLLQSIKGTRDGGFILAGTSSSGNSFQKKDNCKGLTDFWVIKLDASGGEQWQRTIGGDGQDELLCAFQ TKDGGYILGGSSSSSPSSVTNIKAEGKMDAFLQTDLYSKSEKSRGNMDYWIVKLDKEGVIEWQKTYGGKYADVLRSMEQT ADNGYILAGYSNSPVSGDKADANKGVGDYWIIKIDDSGAVQWQSTYGGDGDDQPYVIHQTADGGYILGGNSNSTNPLTTL GGIVSNGTDFWILRLDHEGGVVWSKTYDFGKVDILTSLVENNDNTYLIGGYAKSEAKQSLLGDAAKKAGTGKDKEGINDY IALKIDEKGEELWKKTVGSAGEDILRKLIETRDGGYLMAGTSNSGSSKDKRSTIGGNDFWVVKLKDKAKVEKVKASIEAI PNPAVTYTNVIIGYDFTEGTASVIDILGRILQQFSINSRTVPVDLSHYAEGIYIIKIKTDVKTESVKVIKTVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60454; Mature: 60454
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNYLLFFILLSFLTYSQDILWEKSYGGIHADYLFDAQPTADYGFILAGSSLSNKTGNK CCCCEEHHHHHHHHHHCCHHHEEECCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCC DEDNHGDLDYWIWKMNEKGELDWQKSIGGNGFDLLQSIKGTRDGGFILAGTSSSGNSFQK CCCCCCCEEEEEEEECCCCCCCHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCC KDNCKGLTDFWVIKLDASGGEQWQRTIGGDGQDELLCAFQTKDGGYILGGSSSSSPSSVT CCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCCCCCEE NIKAEGKMDAFLQTDLYSKSEKSRGNMDYWIVKLDKEGVIEWQKTYGGKYADVLRSMEQT EEEECCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEHHHCCCHHHHHHHHHHHC ADNGYILAGYSNSPVSGDKADANKGVGDYWIIKIDDSGAVQWQSTYGGDGDDQPYVIHQT CCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEEE ADGGYILGGNSNSTNPLTTLGGIVSNGTDFWILRLDHEGGVVWSKTYDFGKVDILTSLVE CCCCEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHH NNDNTYLIGGYAKSEAKQSLLGDAAKKAGTGKDKEGINDYIALKIDEKGEELWKKTVGSA CCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCC GEDILRKLIETRDGGYLMAGTSNSGSSKDKRSTIGGNDFWVVKLKDKAKVEKVKASIEAI HHHHHHHHHHCCCCCEEEEECCCCCCCCCHHCCCCCCCEEEEEECCCHHHHHHHHHHHHC PNPAVTYTNVIIGYDFTEGTASVIDILGRILQQFSINSRTVPVDLSHYAEGIYIIKIKTD CCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCEEEEEEECC VKTESVKVIKTVR CCCCCEEEEEECC >Mature Secondary Structure MKKNYLLFFILLSFLTYSQDILWEKSYGGIHADYLFDAQPTADYGFILAGSSLSNKTGNK CCCCEEHHHHHHHHHHCCHHHEEECCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCC DEDNHGDLDYWIWKMNEKGELDWQKSIGGNGFDLLQSIKGTRDGGFILAGTSSSGNSFQK CCCCCCCEEEEEEEECCCCCCCHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCC KDNCKGLTDFWVIKLDASGGEQWQRTIGGDGQDELLCAFQTKDGGYILGGSSSSSPSSVT CCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCCCCCEE NIKAEGKMDAFLQTDLYSKSEKSRGNMDYWIVKLDKEGVIEWQKTYGGKYADVLRSMEQT EEEECCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEHHHCCCHHHHHHHHHHHC ADNGYILAGYSNSPVSGDKADANKGVGDYWIIKIDDSGAVQWQSTYGGDGDDQPYVIHQT CCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEEE ADGGYILGGNSNSTNPLTTLGGIVSNGTDFWILRLDHEGGVVWSKTYDFGKVDILTSLVE CCCCEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHH NNDNTYLIGGYAKSEAKQSLLGDAAKKAGTGKDKEGINDYIALKIDEKGEELWKKTVGSA CCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCC GEDILRKLIETRDGGYLMAGTSNSGSSKDKRSTIGGNDFWVVKLKDKAKVEKVKASIEAI HHHHHHHHHHCCCCCEEEEECCCCCCCCCHHCCCCCCCEEEEEECCCHHHHHHHHHHHHC PNPAVTYTNVIIGYDFTEGTASVIDILGRILQQFSINSRTVPVDLSHYAEGIYIIKIKTD CCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCEEEEEEECC VKTESVKVIKTVR CCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA