| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301461
Identifier: 146301461
GI number: 146301461
Start: 4410535
End: 4412259
Strand: Reverse
Name: 146301461
Synonym: Fjoh_3719
Alternate gene names: NA
Gene position: 4412259-4410535 (Counterclockwise)
Preceding gene: 146301467
Following gene: 146301460
Centisome position: 72.37
GC content: 41.22
Gene sequence:
>1725_bases ATGGATTACCAGTTAAAAATTCCAGAGAGCCAGCCAATGCGGGAGCAATTGGAAGGAGCTATTAATGACCTGCTGACTTT TGTACAAGCAGGATCGATCTACATCTCCAATAACGGCGGGAACGGTCTGCCGATCATAGTAACCTTTATACTCAAAAAGA ACTGCGGATACAGCGGGGATTCATTGGAGATAATATCGAAAAAAATAACGGACTTCCATCCAGACTTTATTTTCAAGTTT ATCAATGCTTTCAGGGCTTCACAGGGATTCAAAGAGGGATTTCCCTATCTTATCCGCCACTGTACTGTCAATGAGCTGGT TTATTACCAGCCGGACAATAAAGTATTTTATCCCTTAAATGGCGATGCAAAAGACCTTATGCACTGGGCACAATTTTCTT TTGAGGATAATATGCAGGATATTGTTTACCATTTTAAAACAGCATCCGCCCACATGAAGAACAATGACAATAAGGAAGCT GGCTATTTCATGTGTCTTGCTATTTGGAACCTCTACTGCTGTTATACGTGGCTTCTTATCGGTGAGATCGGCGAAGACAT GGGCAGGCCGAGCTTGGTGCATGAATACAAGAAAGTCGTGAGATTTGTTCCATACCTGAGAGAAATACTTGATTACGATA TACCTGAAGACAGGGAAATTATTGACAGGCTCAGTAATGCCCATACTTACTATCGTGACAATACGATCAATTTTGATATC AATCCAGCAGTCTTGGAAAGGGCAAAGCTAAAGTTTGAGCTTTTGGAAAAAGAGTTTCGCAGTCTTTTTTGGGGTTATAA AAAAGGTTTCAAATCAAAAATGAAACGGTTCGGCAACCAGTCATTTTCAGGACAGTCAGTCCTGACTGAAAAAATGAAGT CGAACTATTTCATAGGACATGCACTTTCAGAAGTAAGCGAGACCATTGCAGGTTTTCTTAAAATCCGTGCCGTTTACTGC TTTGGATATGCAAGAACCAACAGCAATGATGAGGAAAAAAGCAAGAAGCTATTCAATAAACATTTACCCGGCTATCACTT TTACCTGCTTGTAATGAGCAGTGAATACAAGGAAAATGCGATACCGTTATTACAGTATCATATAAAGGAAAAGTTTGGAA ACAGGTATACGGCTACCATTTTGATCCACAGGGTAAAGAATCTCCGATCACAGAACAATAACCAAAAGTACTTCCTCAAT AAGGTTATTGAAAATGGCATTCCGGCCTACTGCGACAGCCAGTATGCCATCTATCCGTTAAATGCAGATCCCCAAAGGGA TATTGAATTTACAAGCAACTACTGGAAGAACCGCATGCTTGGGGCAGAACAATTCCTGATGACAGCCGAGCAGTGCACCG AGCCAGAGGAGGCACTGGTAAAAAATGCTTTGGTTCAGCAGGCTGTCCAGCTGGTAGCGACTGCCCAGCTAGACCTTTTT CTCAGCTACCATCCCACTGTCTATTCTATTGCTTACCTGTTCCGTCTCTTGCAATGCATCCCTGAAATAAAAATGCCCTT CTCAGATTCACAGCTGGACATAAAACTCAGGGAACTGCTTTCTGCCAGCATAGACATGATAAAGCACAAAGATCTTAATG TGGACAGTATTGAAGACAGCAATCTGCTCTTCACCAAATGTGAAGAATTTTATAATGAAATGTACACACTTGGATATACT GAACTGAAAAGACTGGATGATTTGAAACAGCAGGACGAGATTTAA
Upstream 100 bases:
>100_bases CATATTGATTCCGTACAGAACAAGTAATTGCTTACTTGCCTGTGTGTTAGACAAAAATACAACTTTTCACTTTTATGTAC AACTTCAAATTATCAAATTT
Downstream 100 bases:
>100_bases TAACAATAATTTTTTTACTATGAAAAAAAATAAAAACTTCAATAAAGATCAAAAGCTTGTAGAATCAGCAGAACAGGCAA AGAGAGTGCTGGATATGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 574; Mature: 574
Protein sequence:
>574_residues MDYQLKIPESQPMREQLEGAINDLLTFVQAGSIYISNNGGNGLPIIVTFILKKNCGYSGDSLEIISKKITDFHPDFIFKF INAFRASQGFKEGFPYLIRHCTVNELVYYQPDNKVFYPLNGDAKDLMHWAQFSFEDNMQDIVYHFKTASAHMKNNDNKEA GYFMCLAIWNLYCCYTWLLIGEIGEDMGRPSLVHEYKKVVRFVPYLREILDYDIPEDREIIDRLSNAHTYYRDNTINFDI NPAVLERAKLKFELLEKEFRSLFWGYKKGFKSKMKRFGNQSFSGQSVLTEKMKSNYFIGHALSEVSETIAGFLKIRAVYC FGYARTNSNDEEKSKKLFNKHLPGYHFYLLVMSSEYKENAIPLLQYHIKEKFGNRYTATILIHRVKNLRSQNNNQKYFLN KVIENGIPAYCDSQYAIYPLNADPQRDIEFTSNYWKNRMLGAEQFLMTAEQCTEPEEALVKNALVQQAVQLVATAQLDLF LSYHPTVYSIAYLFRLLQCIPEIKMPFSDSQLDIKLRELLSASIDMIKHKDLNVDSIEDSNLLFTKCEEFYNEMYTLGYT ELKRLDDLKQQDEI
Sequences:
>Translated_574_residues MDYQLKIPESQPMREQLEGAINDLLTFVQAGSIYISNNGGNGLPIIVTFILKKNCGYSGDSLEIISKKITDFHPDFIFKF INAFRASQGFKEGFPYLIRHCTVNELVYYQPDNKVFYPLNGDAKDLMHWAQFSFEDNMQDIVYHFKTASAHMKNNDNKEA GYFMCLAIWNLYCCYTWLLIGEIGEDMGRPSLVHEYKKVVRFVPYLREILDYDIPEDREIIDRLSNAHTYYRDNTINFDI NPAVLERAKLKFELLEKEFRSLFWGYKKGFKSKMKRFGNQSFSGQSVLTEKMKSNYFIGHALSEVSETIAGFLKIRAVYC FGYARTNSNDEEKSKKLFNKHLPGYHFYLLVMSSEYKENAIPLLQYHIKEKFGNRYTATILIHRVKNLRSQNNNQKYFLN KVIENGIPAYCDSQYAIYPLNADPQRDIEFTSNYWKNRMLGAEQFLMTAEQCTEPEEALVKNALVQQAVQLVATAQLDLF LSYHPTVYSIAYLFRLLQCIPEIKMPFSDSQLDIKLRELLSASIDMIKHKDLNVDSIEDSNLLFTKCEEFYNEMYTLGYT ELKRLDDLKQQDEI >Mature_574_residues MDYQLKIPESQPMREQLEGAINDLLTFVQAGSIYISNNGGNGLPIIVTFILKKNCGYSGDSLEIISKKITDFHPDFIFKF INAFRASQGFKEGFPYLIRHCTVNELVYYQPDNKVFYPLNGDAKDLMHWAQFSFEDNMQDIVYHFKTASAHMKNNDNKEA GYFMCLAIWNLYCCYTWLLIGEIGEDMGRPSLVHEYKKVVRFVPYLREILDYDIPEDREIIDRLSNAHTYYRDNTINFDI NPAVLERAKLKFELLEKEFRSLFWGYKKGFKSKMKRFGNQSFSGQSVLTEKMKSNYFIGHALSEVSETIAGFLKIRAVYC FGYARTNSNDEEKSKKLFNKHLPGYHFYLLVMSSEYKENAIPLLQYHIKEKFGNRYTATILIHRVKNLRSQNNNQKYFLN KVIENGIPAYCDSQYAIYPLNADPQRDIEFTSNYWKNRMLGAEQFLMTAEQCTEPEEALVKNALVQQAVQLVATAQLDLF LSYHPTVYSIAYLFRLLQCIPEIKMPFSDSQLDIKLRELLSASIDMIKHKDLNVDSIEDSNLLFTKCEEFYNEMYTLGYT ELKRLDDLKQQDEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67055; Mature: 67055
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYQLKIPESQPMREQLEGAINDLLTFVQAGSIYISNNGGNGLPIIVTFILKKNCGYSGD CCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCC SLEIISKKITDFHPDFIFKFINAFRASQGFKEGFPYLIRHCTVNELVYYQPDNKVFYPLN HHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHCCCHHHHHHCCCCCEEEECCCCCEEEECC GDAKDLMHWAQFSFEDNMQDIVYHFKTASAHMKNNDNKEAGYFMCLAIWNLYCCYTWLLI CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH GEIGEDMGRPSLVHEYKKVVRFVPYLREILDYDIPEDREIIDRLSNAHTYYRDNTINFDI HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCEEEECC NPAVLERAKLKFELLEKEFRSLFWGYKKGFKSKMKRFGNQSFSGQSVLTEKMKSNYFIGH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHH ALSEVSETIAGFLKIRAVYCFGYARTNSNDEEKSKKLFNKHLPGYHFYLLVMSSEYKENA HHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCC IPLLQYHIKEKFGNRYTATILIHRVKNLRSQNNNQKYFLNKVIENGIPAYCDSQYAIYPL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEC NADPQRDIEFTSNYWKNRMLGAEQFLMTAEQCTEPEEALVKNALVQQAVQLVATAQLDLF CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHE LSYHPTVYSIAYLFRLLQCIPEIKMPFSDSQLDIKLRELLSASIDMIKHKDLNVDSIEDS EECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC NLLFTKCEEFYNEMYTLGYTELKRLDDLKQQDEI CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MDYQLKIPESQPMREQLEGAINDLLTFVQAGSIYISNNGGNGLPIIVTFILKKNCGYSGD CCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCC SLEIISKKITDFHPDFIFKFINAFRASQGFKEGFPYLIRHCTVNELVYYQPDNKVFYPLN HHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHCCCHHHHHHCCCCCEEEECCCCCEEEECC GDAKDLMHWAQFSFEDNMQDIVYHFKTASAHMKNNDNKEAGYFMCLAIWNLYCCYTWLLI CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH GEIGEDMGRPSLVHEYKKVVRFVPYLREILDYDIPEDREIIDRLSNAHTYYRDNTINFDI HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCEEEECC NPAVLERAKLKFELLEKEFRSLFWGYKKGFKSKMKRFGNQSFSGQSVLTEKMKSNYFIGH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHH ALSEVSETIAGFLKIRAVYCFGYARTNSNDEEKSKKLFNKHLPGYHFYLLVMSSEYKENA HHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCC IPLLQYHIKEKFGNRYTATILIHRVKNLRSQNNNQKYFLNKVIENGIPAYCDSQYAIYPL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEC NADPQRDIEFTSNYWKNRMLGAEQFLMTAEQCTEPEEALVKNALVQQAVQLVATAQLDLF CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHE LSYHPTVYSIAYLFRLLQCIPEIKMPFSDSQLDIKLRELLSASIDMIKHKDLNVDSIEDS EECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC NLLFTKCEEFYNEMYTLGYTELKRLDDLKQQDEI CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA